RNA–Protein interactions for RNA: ENST00000441657.1

SP140-206, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-206ENST00000441657 STRCP1A6NGW2 1772 aa10.58□□□□□ -0.72
SP140-206ENST00000441657 MED14O60244 1454 aa10.57□□□□□ -0.72
SP140-206ENST00000441657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.57□□□□□ -0.72
SP140-206ENST00000441657 JCADQ9P266 1359 aa10.57□□□□□ -0.72
SP140-206ENST00000441657 SUPT5HO00267 1087 aaKnown RBP10.57□□□□□ -0.72
SP140-206ENST00000441657 MEX3CQ5U5Q3 659 aaKnown RBP10.56□□□□□ -0.72
SP140-206ENST00000441657 CLTCQ00610 1675 aaKnown RBP10.56□□□□□ -0.72
SP140-206ENST00000441657 THEMISQ8N1K5 641 aaPredicted RBP10.55□□□□□ -0.72
SP140-206ENST00000441657 CDK13Q14004 1512 aaKnown RBP10.54□□□□□ -0.72
SP140-206ENST00000441657 MYO5CQ9NQX4 1742 aa10.54□□□□□ -0.72
SP140-206ENST00000441657 DEPDC5O75140 1603 aa10.53□□□□□ -0.72
SP140-206ENST00000441657 NUTM2BA6NNL0 878 aaPredicted RBP10.52□□□□□ -0.73
SP140-206ENST00000441657 NUTM2EB1AL46 878 aaPredicted RBP10.52□□□□□ -0.73
SP140-206ENST00000441657 NUTM2DQ5VT03 806 aaPredicted RBP10.52□□□□□ -0.73
SP140-206ENST00000441657 NUTM2AQ8IVF1 878 aaPredicted RBP10.52□□□□□ -0.73
SP140-206ENST00000441657 SAMD9Q5K651 1589 aa10.52□□□□□ -0.73
SP140-206ENST00000441657 IQGAP1P46940 1657 aa10.51□□□□□ -0.73
SP140-206ENST00000441657 FOXD4L1Q9NU39 408 aa10.51□□□□□ -0.73
SP140-206ENST00000441657 ABCC1P33527 1531 aa10.51□□□□□ -0.73
SP140-206ENST00000441657 ARHGAP5Q13017 1502 aa10.51□□□□□ -0.73
SP140-206ENST00000441657 SPATA31A6Q5VVP1 1343 aa10.51□□□□□ -0.73
SP140-206ENST00000441657 ROBO1Q9Y6N7 1651 aa10.5□□□□□ -0.73
SP140-206ENST00000441657 KIDINS220Q9ULH0 1771 aa10.5□□□□□ -0.73
SP140-206ENST00000441657 TNRQ92752 1358 aa10.5□□□□□ -0.73
SP140-206ENST00000441657 LRP6O75581 1613 aa10.49□□□□□ -0.73
SP140-206ENST00000441657 GGT6Q6P531 493 aa10.49□□□□□ -0.73
SP140-206ENST00000441657 XIRP1Q702N8 1843 aaKnown RBP10.48□□□□□ -0.73
SP140-206ENST00000441657 ITSN2Q9NZM3 1697 aa10.47□□□□□ -0.73
SP140-206ENST00000441657 U3KPZ7 1027 aaPredicted RBP10.47□□□□□ -0.73
SP140-206ENST00000441657 ATAD2Q6PL18 1390 aa10.47□□□□□ -0.73
SP140-206ENST00000441657 KDM5DQ9BY66 1539 aa10.47□□□□□ -0.73
SP140-206ENST00000441657 FAM135AQ9P2D6 1515 aa10.47□□□□□ -0.73
SP140-206ENST00000441657 PHLPP1O60346 1717 aa10.47□□□□□ -0.73
SP140-206ENST00000441657 YY1P25490 414 aa10.46□□□□□ -0.73
SP140-206ENST00000441657 RGS12O14924 1447 aa10.46□□□□□ -0.74
SP140-206ENST00000441657 LRRC9Q6ZRR7 1453 aa10.45□□□□□ -0.74
SP140-206ENST00000441657 RBM6P78332 1123 aaKnown RBP10.45□□□□□ -0.74
SP140-206ENST00000441657 FBXO31Q5XUX0 539 aaPredicted RBP10.45□□□□□ -0.74
SP140-206ENST00000441657 LRP5O75197 1615 aa10.44□□□□□ -0.74
SP140-206ENST00000441657 UGGT1Q9NYU2 1555 aa10.44□□□□□ -0.74
SP140-206ENST00000441657 PRXQ9BXM0 1461 aa10.44□□□□□ -0.74
SP140-206ENST00000441657 FGD6Q6ZV73 1430 aa10.44□□□□□ -0.74
SP140-206ENST00000441657 AFF2P51816 1311 aa10.43□□□□□ -0.74
SP140-206ENST00000441657 CCDC125Q86Z20 511 aa10.43□□□□□ -0.74
SP140-206ENST00000441657 QTRT2Q9H974 415 aaKnown RBP10.42□□□□□ -0.74
SP140-206ENST00000441657 CDK11AQ9UQ88 783 aaPredicted RBP10.42□□□□□ -0.74
SP140-206ENST00000441657 NLRP1Q9C000 1473 aa10.42□□□□□ -0.74
SP140-206ENST00000441657 TMEM94Q12767 1356 aa10.41□□□□□ -0.74
SP140-206ENST00000441657 SLAIN2Q9P270 581 aa10.41□□□□□ -0.74
SP140-206ENST00000441657 MIA2Q96PC5 1412 aa10.41□□□□□ -0.74
SP140-206ENST00000441657 SPAG9O60271 1321 aaKnown RBP10.4□□□□□ -0.74
SP140-206ENST00000441657 A2MP01023 1474 aa10.4□□□□□ -0.74
SP140-206ENST00000441657 ZC3H13Q5T200 1668 aaKnown RBP10.4□□□□□ -0.74
SP140-206ENST00000441657 COL16A1Q07092 1604 aaPredicted RBP10.4□□□□□ -0.75
SP140-206ENST00000441657 KIF14Q15058 1648 aa10.4□□□□□ -0.75
SP140-206ENST00000441657 ATP7AQ04656 1500 aa10.39□□□□□ -0.75
SP140-206ENST00000441657 NGLY1Q96IV0 654 aa10.39□□□□□ -0.75
SP140-206ENST00000441657 PLXNC1O60486 1568 aa10.39□□□□□ -0.75
SP140-206ENST00000441657 CDC42BPBQ9Y5S2 1711 aa10.38□□□□□ -0.75
SP140-206ENST00000441657 PZPP20742 1482 aa10.38□□□□□ -0.75
SP140-206ENST00000441657 RANGAP1P46060 587 aaPredicted RBP10.38□□□□□ -0.75
SP140-206ENST00000441657 SAMD9LQ8IVG5 1584 aa10.38□□□□□ -0.75
SP140-206ENST00000441657 PROSER2Q86WR7 435 aaPredicted RBP10.37□□□□□ -0.75
SP140-206ENST00000441657 SPINK5Q9NQ38 1064 aaPredicted RBP10.37□□□□□ -0.75
SP140-206ENST00000441657 SENP3-EIF4A1A0A087X0R7 540 aa10.36□□□□□ -0.75
SP140-206ENST00000441657 SHPRHQ149N8 1683 aa10.35□□□□□ -0.75
SP140-206ENST00000441657 TROQ12816 1431 aaPredicted RBP10.35□□□□□ -0.75
SP140-206ENST00000441657 MSH6P52701 1360 aa10.35□□□□□ -0.75
SP140-206ENST00000441657 CLIP1P30622 1438 aa10.34□□□□□ -0.75
SP140-206ENST00000441657 MAP3K1Q13233 1512 aa10.34□□□□□ -0.75
SP140-206ENST00000441657 KCNA6P17658 529 aa10.34□□□□□ -0.75
SP140-206ENST00000441657 ATP1B4Q9UN42 357 aaPredicted RBP10.34□□□□□ -0.75
SP140-206ENST00000441657 SCAF11Q99590 1463 aaKnown RBP10.34□□□□□ -0.75
SP140-206ENST00000441657 SLC4A2P04920 1241 aa10.33□□□□□ -0.76
SP140-206ENST00000441657 TXNDC2Q86VQ3 553 aa10.33□□□□□ -0.76
SP140-206ENST00000441657 LTKP29376 864 aa10.32□□□□□ -0.76
SP140-206ENST00000441657 C8orf37Q96NL8 207 aa10.32□□□□□ -0.76
SP140-206ENST00000441657 PREX2Q70Z35 1606 aa10.32□□□□□ -0.76
SP140-206ENST00000441657 NWD1Q149M9 1564 aa10.31□□□□□ -0.76
SP140-206ENST00000441657 HRCP23327 699 aa10.31□□□□□ -0.76
SP140-206ENST00000441657 WASHC2CQ9Y4E1 1318 aa10.31□□□□□ -0.76
SP140-206ENST00000441657 NHSL1Q5SYE7 1610 aa10.3□□□□□ -0.76
SP140-206ENST00000441657 CAPN15O75808 1086 aa10.3□□□□□ -0.76
SP140-206ENST00000441657 HNRNPMP52272 730 aaKnown RBP eCLIP10.3□□□□□ -0.76
SP140-206ENST00000441657 PRDM15P57071 1507 aaPredicted RBP10.29□□□□□ -0.76
SP140-206ENST00000441657 DSG3P32926 999 aa10.29□□□□□ -0.76
SP140-206ENST00000441657 ZNF777Q9ULD5 760 aaPredicted RBP10.29□□□□□ -0.76
SP140-206ENST00000441657 EID1Q9Y6B2 187 aa10.29□□□□□ -0.76
SP140-206ENST00000441657 ABCC3O15438 1527 aa10.28□□□□□ -0.76
SP140-206ENST00000441657 TIAM1Q13009 1591 aa10.28□□□□□ -0.76
SP140-206ENST00000441657 AHDC1Q5TGY3 1603 aaPredicted RBP10.28□□□□□ -0.76
SP140-206ENST00000441657 INO80Q9ULG1 1556 aaPredicted RBP10.27□□□□□ -0.76
SP140-206ENST00000441657 EP400Q96L91 3159 aa10.27□□□□□ -0.77
SP140-206ENST00000441657 PSDA5PKW4 1024 aaPredicted RBP10.27□□□□□ -0.77
SP140-206ENST00000441657 DEFB132Q7Z7B7 95 aa10.27□□□□□ -0.77
SP140-206ENST00000441657 ADGBQ8N7X0 1667 aa10.27□□□□□ -0.77
SP140-206ENST00000441657 SYCP2Q9BX26 1530 aa10.27□□□□□ -0.77
SP140-206ENST00000441657 BLMP54132 1417 aaPredicted RBP10.26□□□□□ -0.77
SP140-206ENST00000441657 ARHGAP23Q9P227 1491 aa10.26□□□□□ -0.77
SP140-206ENST00000441657 KIF3BO15066 747 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms