RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 STK26Q9P289 416 aa16.28■□□□□ 0.2
BRPF3-203ENST00000441123 GOLGA6L6A8MZA4 724 aa16.27■□□□□ 0.2
BRPF3-203ENST00000441123 E9PSI1 815 aa16.27■□□□□ 0.2
BRPF3-203ENST00000441123 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.2
BRPF3-203ENST00000441123 LMOD2Q6P5Q4 547 aa16.27■□□□□ 0.19
BRPF3-203ENST00000441123 NAP1L5Q96NT1 182 aaPredicted RBP16.26■□□□□ 0.19
BRPF3-203ENST00000441123 SMC4Q9NTJ3 1288 aa16.25■□□□□ 0.19
BRPF3-203ENST00000441123 DNTTIP2Q5QJE6 756 aaKnown RBP16.25■□□□□ 0.19
BRPF3-203ENST00000441123 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
BRPF3-203ENST00000441123 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
BRPF3-203ENST00000441123 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
BRPF3-203ENST00000441123 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
BRPF3-203ENST00000441123 SUPT6HQ7KZ85 1726 aaKnown RBP16.24■□□□□ 0.19
BRPF3-203ENST00000441123 MAP3K1Q13233 1512 aa16.23■□□□□ 0.19
BRPF3-203ENST00000441123 KCNJ4P48050 445 aa16.23■□□□□ 0.19
BRPF3-203ENST00000441123 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
BRPF3-203ENST00000441123 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
BRPF3-203ENST00000441123 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
BRPF3-203ENST00000441123 FAM161AQ3B820 660 aa16.21■□□□□ 0.19
BRPF3-203ENST00000441123 CCDC146Q8IYE0 955 aa16.21■□□□□ 0.19
BRPF3-203ENST00000441123 HMMRO75330 724 aa16.21■□□□□ 0.19
BRPF3-203ENST00000441123 HDAC5Q9UQL6 1122 aa16.21■□□□□ 0.19
BRPF3-203ENST00000441123 EVC2Q86UK5 1308 aa16.21■□□□□ 0.18
BRPF3-203ENST00000441123 TOPBP1Q92547 1522 aa16.2■□□□□ 0.18
BRPF3-203ENST00000441123 VGFO15240 615 aaPredicted RBP16.2■□□□□ 0.18
BRPF3-203ENST00000441123 NRDCO43847 1150 aa16.2■□□□□ 0.18
BRPF3-203ENST00000441123 MSNP26038 577 aaKnown RBP16.2■□□□□ 0.18
BRPF3-203ENST00000441123 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.186e-9■■■■■ 37.6
BRPF3-203ENST00000441123 FGD1P98174 961 aa16.19■□□□□ 0.18
BRPF3-203ENST00000441123 AAMPQ13685 434 aa16.19■□□□□ 0.18
BRPF3-203ENST00000441123 PDE4AP27815 886 aa16.18■□□□□ 0.18
BRPF3-203ENST00000441123 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
BRPF3-203ENST00000441123 GOLGA6L4A6NEF3 574 aa16.18■□□□□ 0.18
BRPF3-203ENST00000441123 CUL7Q14999 1698 aa16.17■□□□□ 0.18
BRPF3-203ENST00000441123 MLECQ14165 292 aa16.17■□□□□ 0.18
BRPF3-203ENST00000441123 STK31Q9BXU1 1019 aa16.17■□□□□ 0.18
BRPF3-203ENST00000441123 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
BRPF3-203ENST00000441123 KIAA1211Q6ZU35 1233 aa16.17■□□□□ 0.18
BRPF3-203ENST00000441123 PEG3Q9GZU2 1588 aa16.17■□□□□ 0.18
BRPF3-203ENST00000441123 TRHP20396 242 aaPredicted RBP16.16■□□□□ 0.18
BRPF3-203ENST00000441123 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
BRPF3-203ENST00000441123 SYAP1Q96A49 352 aaPredicted RBP16.16■□□□□ 0.18
BRPF3-203ENST00000441123 WASHC2AQ641Q2 1341 aa16.16■□□□□ 0.18
BRPF3-203ENST00000441123 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
BRPF3-203ENST00000441123 EXOC6Q8TAG9 804 aa16.15■□□□□ 0.18
BRPF3-203ENST00000441123 PLEKHH2Q8IVE3 1493 aa16.15■□□□□ 0.18
BRPF3-203ENST00000441123 CHAF1AQ13111 956 aaPredicted RBP16.14■□□□□ 0.18
BRPF3-203ENST00000441123 RTN4Q9NQC3 1192 aaKnown RBP16.14■□□□□ 0.18
BRPF3-203ENST00000441123 NPHP1O15259 732 aa16.14■□□□□ 0.17
BRPF3-203ENST00000441123 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
BRPF3-203ENST00000441123 ZKSCAN2Q63HK3 967 aa16.14■□□□□ 0.17
BRPF3-203ENST00000441123 TRAK1Q9UPV9 953 aa16.14■□□□□ 0.17
BRPF3-203ENST00000441123 KIAA1107Q9UPP5 1409 aa16.14■□□□□ 0.17
BRPF3-203ENST00000441123 SPRYD3Q8NCJ5 442 aa16.14■□□□□ 0.17
BRPF3-203ENST00000441123 CRBNQ96SW2 442 aa16.13■□□□□ 0.17
BRPF3-203ENST00000441123 GOLGA6L3A6NEY3 463 aa16.13■□□□□ 0.17
BRPF3-203ENST00000441123 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
BRPF3-203ENST00000441123 SLKQ9H2G2 1235 aaPredicted RBP16.12■□□□□ 0.17
BRPF3-203ENST00000441123 ZNF644Q9H582 1327 aaPredicted RBP16.12■□□□□ 0.17
BRPF3-203ENST00000441123 GPATCH3Q96I76 525 aa16.11■□□□□ 0.17
BRPF3-203ENST00000441123 HTATSF1O43719 755 aaKnown RBP16.11■□□□□ 0.17
BRPF3-203ENST00000441123 DDX11L8A8MPP1 907 aa16.11■□□□□ 0.17
BRPF3-203ENST00000441123 ROCK1Q13464 1354 aa16.11■□□□□ 0.17
BRPF3-203ENST00000441123 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
BRPF3-203ENST00000441123 EID1Q9Y6B2 187 aa16.1■□□□□ 0.17
BRPF3-203ENST00000441123 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
BRPF3-203ENST00000441123 BIVM-ERCC5R4GMW8 1640 aa16.1■□□□□ 0.17
BRPF3-203ENST00000441123 TROQ12816 1431 aaPredicted RBP16.1■□□□□ 0.17
BRPF3-203ENST00000441123 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
BRPF3-203ENST00000441123 SCAPERQ9BY12 1400 aa16.1■□□□□ 0.17
BRPF3-203ENST00000441123 SOX12O15370 315 aa16.09■□□□□ 0.17
BRPF3-203ENST00000441123 DAPK1P53355 1430 aa16.09■□□□□ 0.17
BRPF3-203ENST00000441123 CSPP1Q1MSJ5 1256 aa16.09■□□□□ 0.17
BRPF3-203ENST00000441123 PCF11O94913 1555 aaKnown RBP16.08■□□□□ 0.17
BRPF3-203ENST00000441123 CLUAP1Q96AJ1 413 aa16.08■□□□□ 0.16
BRPF3-203ENST00000441123 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
BRPF3-203ENST00000441123 DDX19BQ9UMR2 479 aa16.07■□□□□ 0.16
BRPF3-203ENST00000441123 C9orf84Q5VXU9 1444 aa16.07■□□□□ 0.16
BRPF3-203ENST00000441123 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
BRPF3-203ENST00000441123 ST18O60284 1047 aa16.07■□□□□ 0.16
BRPF3-203ENST00000441123 TPRNQ4KMQ1 711 aa16.07■□□□□ 0.16
BRPF3-203ENST00000441123 APAF1O14727 1248 aa16.05■□□□□ 0.16
BRPF3-203ENST00000441123 SKOR2Q2VWA4 1001 aaPredicted RBP16.05■□□□□ 0.16
BRPF3-203ENST00000441123 APBB1O00213 710 aa16.04■□□□□ 0.16
BRPF3-203ENST00000441123 PLIN1O60240 522 aa16.04■□□□□ 0.16
BRPF3-203ENST00000441123 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
BRPF3-203ENST00000441123 COG3Q96JB2 828 aa16.04■□□□□ 0.16
BRPF3-203ENST00000441123 NAP1L2Q9ULW6 460 aaPredicted RBP16.03■□□□□ 0.16
BRPF3-203ENST00000441123 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
BRPF3-203ENST00000441123 KIAA2012Q0VF49 1180 aa16.03■□□□□ 0.16
BRPF3-203ENST00000441123 RRP7AQ9Y3A4 280 aaKnown RBP16.03■□□□□ 0.16
BRPF3-203ENST00000441123 TULP1O00294 542 aaPredicted RBP16.02■□□□□ 0.16
BRPF3-203ENST00000441123 EPRSP07814 1512 aaKnown RBP16.02■□□□□ 0.16
BRPF3-203ENST00000441123 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.15
BRPF3-203ENST00000441123 IQGAP2Q13576 1575 aa16.02■□□□□ 0.15
BRPF3-203ENST00000441123 PHF14O94880 888 aa16.02■□□□□ 0.15
BRPF3-203ENST00000441123 NAIPQ13075 1403 aa16.02■□□□□ 0.15
BRPF3-203ENST00000441123 DIAPH1O60610 1272 aaKnown RBP16.01■□□□□ 0.15
BRPF3-203ENST00000441123 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.01■□□□□ 0.15
BRPF3-203ENST00000441123 SMG6Q86US8 1419 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms