RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SCAPERQ9BY12 1400 aa19.65■□□□□ 0.74
LIMD1-202ENST00000440097 ARAP3Q8WWN8 1544 aa19.64■□□□□ 0.74
LIMD1-202ENST00000440097 ADGRL1O94910 1474 aa19.64■□□□□ 0.74
LIMD1-202ENST00000440097 ABCA9Q8IUA7 1624 aa19.64■□□□□ 0.73
LIMD1-202ENST00000440097 POLR3GLQ9BT43 218 aa19.62■□□□□ 0.73
LIMD1-202ENST00000440097 UNC13BO14795 1591 aa19.62■□□□□ 0.73
LIMD1-202ENST00000440097 FKBP8Q14318 412 aa19.61■□□□□ 0.73
LIMD1-202ENST00000440097 RTEL1-TNFRSF6BF6WH68 1400 aa19.59■□□□□ 0.73
LIMD1-202ENST00000440097 CARD11Q9BXL7 1154 aa19.59■□□□□ 0.73
LIMD1-202ENST00000440097 ZFYVE16Q7Z3T8 1539 aa19.58■□□□□ 0.73
LIMD1-202ENST00000440097 KIF3BO15066 747 aa19.58■□□□□ 0.72
LIMD1-202ENST00000440097 USP47Q96K76 1375 aa19.58■□□□□ 0.72
LIMD1-202ENST00000440097 CD109Q6YHK3 1445 aa19.57■□□□□ 0.72
LIMD1-202ENST00000440097 IQGAP3Q86VI3 1631 aa19.56■□□□□ 0.72
LIMD1-202ENST00000440097 CCDC7Q96M83 1385 aa19.56■□□□□ 0.72
LIMD1-202ENST00000440097 ATP7AQ04656 1500 aa19.56■□□□□ 0.72
LIMD1-202ENST00000440097 CCER2I3L3R5 266 aa19.54■□□□□ 0.72
LIMD1-202ENST00000440097 SPATA31E1Q6ZUB1 1445 aa19.53■□□□□ 0.72
LIMD1-202ENST00000440097 KIF7Q2M1P5 1343 aa19.53■□□□□ 0.72
LIMD1-202ENST00000440097 PLA2R1Q13018 1463 aa19.52■□□□□ 0.72
LIMD1-202ENST00000440097 KANK1Q14678 1352 aa19.52■□□□□ 0.71
LIMD1-202ENST00000440097 MAGI2Q86UL8 1455 aa19.51■□□□□ 0.71
LIMD1-202ENST00000440097 UHRF1BP1Q6BDS2 1440 aa19.51■□□□□ 0.71
LIMD1-202ENST00000440097 RBM19Q9Y4C8 960 aaKnown RBP19.51■□□□□ 0.71
LIMD1-202ENST00000440097 ROCK2O75116 1388 aaKnown RBP19.51■□□□□ 0.71
LIMD1-202ENST00000440097 CNTLNQ9NXG0 1405 aa19.5■□□□□ 0.71
LIMD1-202ENST00000440097 CNGB1Q14028 1251 aaPredicted RBP19.49■□□□□ 0.71
LIMD1-202ENST00000440097 RALGAPBQ86X10 1494 aa19.49■□□□□ 0.71
LIMD1-202ENST00000440097 INO80Q9ULG1 1556 aaPredicted RBP19.48■□□□□ 0.71
LIMD1-202ENST00000440097 ZNF518AQ6AHZ1 1483 aa19.48■□□□□ 0.71
LIMD1-202ENST00000440097 DHX29Q7Z478 1369 aaKnown RBP19.47■□□□□ 0.71
LIMD1-202ENST00000440097 ST20-MTHFSA0A0A6YYL1 179 aa19.46■□□□□ 0.71
LIMD1-202ENST00000440097 NEFLP07196 543 aa19.45■□□□□ 0.7
LIMD1-202ENST00000440097 RAPGEF3O95398 923 aa19.44■□□□□ 0.7
LIMD1-202ENST00000440097 KDM5CP41229 1560 aa19.43■□□□□ 0.7
LIMD1-202ENST00000440097 A2MP01023 1474 aa19.43■□□□□ 0.7
LIMD1-202ENST00000440097 PRAG1Q86YV5 1406 aa19.42■□□□□ 0.7
LIMD1-202ENST00000440097 NBPF1Q3BBV0 1214 aa19.42■□□□□ 0.7
LIMD1-202ENST00000440097 CCDC184Q52MB2 194 aa19.42■□□□□ 0.7
LIMD1-202ENST00000440097 GGT6Q6P531 493 aa19.42■□□□□ 0.7
LIMD1-202ENST00000440097 CFAP74Q9C0B2 1584 aa19.41■□□□□ 0.7
LIMD1-202ENST00000440097 ATP10AO60312 1499 aa19.41■□□□□ 0.7
LIMD1-202ENST00000440097 POGZQ7Z3K3 1410 aa19.4■□□□□ 0.7
LIMD1-202ENST00000440097 E9PCH4 1651 aa19.4■□□□□ 0.7
LIMD1-202ENST00000440097 FAM69CQ0P6D2 419 aa19.4■□□□□ 0.7
LIMD1-202ENST00000440097 KIDINS220Q9ULH0 1771 aa19.4■□□□□ 0.7
LIMD1-202ENST00000440097 PRKRIP1Q9H875 184 aaPredicted RBP19.38■□□□□ 0.69
LIMD1-202ENST00000440097 BCORL1Q5H9F3 1711 aa19.38■□□□□ 0.69
LIMD1-202ENST00000440097 RIMBP3CA6NJZ7 1639 aa19.38■□□□□ 0.69
LIMD1-202ENST00000440097 RIMBP3BA6NNM3 1639 aa19.38■□□□□ 0.69
LIMD1-202ENST00000440097 DEPDC5O75140 1603 aa19.38■□□□□ 0.69
LIMD1-202ENST00000440097 RIMBP3Q9UFD9 1639 aa19.38■□□□□ 0.69
LIMD1-202ENST00000440097 POLR1AO95602 1720 aaPredicted RBP19.36■□□□□ 0.69
LIMD1-202ENST00000440097 TET3O43151 1660 aa19.35■□□□□ 0.69
LIMD1-202ENST00000440097 EIF2AK4Q9P2K8 1649 aaKnown RBP19.34■□□□□ 0.69
LIMD1-202ENST00000440097 ARID4BQ4LE39 1312 aaPredicted RBP19.34■□□□□ 0.69
LIMD1-202ENST00000440097 TRPM2O94759 1503 aa19.34■□□□□ 0.69
LIMD1-202ENST00000440097 MRS2Q9HD23 443 aa19.33■□□□□ 0.69
LIMD1-202ENST00000440097 TRPM1Q7Z4N2 1603 aa19.33■□□□□ 0.69
LIMD1-202ENST00000440097 SPHKAPQ2M3C7 1700 aa19.33■□□□□ 0.68
LIMD1-202ENST00000440097 PRDM15P57071 1507 aaPredicted RBP19.33■□□□□ 0.68
LIMD1-202ENST00000440097 NEO1Q92859 1461 aa19.33■□□□□ 0.68
LIMD1-202ENST00000440097 HNRNPUQ00839 825 aaKnown RBP eCLIP19.32■□□□□ 0.68
LIMD1-202ENST00000440097 HECW2Q9P2P5 1572 aa19.32■□□□□ 0.68
LIMD1-202ENST00000440097 MSH5O43196 834 aa19.32■□□□□ 0.68
LIMD1-202ENST00000440097 CHGAP10645 457 aaKnown RBP19.32■□□□□ 0.68
LIMD1-202ENST00000440097 MLH3Q9UHC1 1453 aa19.32■□□□□ 0.68
LIMD1-202ENST00000440097 WASHC2CQ9Y4E1 1318 aa19.31■□□□□ 0.68
LIMD1-202ENST00000440097 PTPRTO14522 1441 aa19.31■□□□□ 0.68
LIMD1-202ENST00000440097 FAM9BQ8IZU0 186 aa19.31■□□□□ 0.68
LIMD1-202ENST00000440097 VWDEQ8N2E2 1590 aa19.3■□□□□ 0.68
LIMD1-202ENST00000440097 CLTCL1P53675 1640 aa19.29■□□□□ 0.68
LIMD1-202ENST00000440097 MROH1Q8NDA8 1641 aa19.29■□□□□ 0.68
LIMD1-202ENST00000440097 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
LIMD1-202ENST00000440097 UGGT1Q9NYU2 1555 aa19.27■□□□□ 0.67
LIMD1-202ENST00000440097 GPRASP1Q5JY77 1395 aa19.27■□□□□ 0.67
LIMD1-202ENST00000440097 EFCAB6Q5THR3 1501 aa19.25■□□□□ 0.67
LIMD1-202ENST00000440097 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
LIMD1-202ENST00000440097 CEP152O94986 1710 aa19.25■□□□□ 0.67
LIMD1-202ENST00000440097 ABCA6Q8N139 1617 aa19.25■□□□□ 0.67
LIMD1-202ENST00000440097 CFAP65Q6ZU64 1925 aaKnown RBP19.24■□□□□ 0.67
LIMD1-202ENST00000440097 FRMPD1Q5SYB0 1578 aa19.24■□□□□ 0.67
LIMD1-202ENST00000440097 PPRC1Q5VV67 1664 aaKnown RBP19.23■□□□□ 0.67
LIMD1-202ENST00000440097 MAP3K4Q9Y6R4 1608 aa19.23■□□□□ 0.67
LIMD1-202ENST00000440097 TMF1P82094 1093 aa19.22■□□□□ 0.67
LIMD1-202ENST00000440097 STAC3Q96MF2 364 aa19.22■□□□□ 0.67
LIMD1-202ENST00000440097 RNF17Q9BXT8 1623 aaKnown RBP19.2■□□□□ 0.66
LIMD1-202ENST00000440097 TESK2Q96S53 571 aa19.2■□□□□ 0.66
LIMD1-202ENST00000440097 NPATQ14207 1427 aa19.19■□□□□ 0.66
LIMD1-202ENST00000440097 YEATS2Q9ULM3 1422 aa19.19■□□□□ 0.66
LIMD1-202ENST00000440097 TSPOAP1O95153 1857 aa19.19■□□□□ 0.66
LIMD1-202ENST00000440097 MADDQ8WXG6 1647 aa19.19■□□□□ 0.66
LIMD1-202ENST00000440097 DISP3Q9P2K9 1392 aa19.19■□□□□ 0.66
LIMD1-202ENST00000440097 LMTK2Q8IWU2 1503 aa19.18■□□□□ 0.66
LIMD1-202ENST00000440097 FANCIQ9NVI1 1328 aa19.17■□□□□ 0.66
LIMD1-202ENST00000440097 CFAP70Q5T0N1 1121 aa19.17■□□□□ 0.66
LIMD1-202ENST00000440097 ADGRF5Q8IZF2 1346 aa19.17■□□□□ 0.66
LIMD1-202ENST00000440097 DIP2CQ9Y2E4 1556 aa19.17■□□□□ 0.66
LIMD1-202ENST00000440097 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
LIMD1-202ENST00000440097 LAMC1P11047 1609 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms