RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 MYOM3Q5VTT5 1437 aa8.09□□□□□ -1.11
BDNF-211ENST00000439476 L1TD1Q5T7N2 865 aaKnown RBP8.09□□□□□ -1.11
BDNF-211ENST00000439476 ST20-MTHFSA0A0A6YYL1 179 aa8.09□□□□□ -1.11
BDNF-211ENST00000439476 NRDCO43847 1150 aa8.09□□□□□ -1.11
BDNF-211ENST00000439476 USP47Q96K76 1375 aa8.09□□□□□ -1.11
BDNF-211ENST00000439476 FGD5Q6ZNL6 1462 aa8.08□□□□□ -1.12
BDNF-211ENST00000439476 MAPK8IP3Q9UPT6 1336 aa8.08□□□□□ -1.12
BDNF-211ENST00000439476 MAPK8IP2Q13387 824 aaPredicted RBP8.08□□□□□ -1.12
BDNF-211ENST00000439476 VGLL3A8MV65 326 aa8.08□□□□□ -1.12
BDNF-211ENST00000439476 PLIN1O60240 522 aa8.08□□□□□ -1.12
BDNF-211ENST00000439476 CASKIN1Q8WXD9 1431 aa8.08□□□□□ -1.12
BDNF-211ENST00000439476 TEX2Q8IWB9 1127 aa8.08□□□□□ -1.12
BDNF-211ENST00000439476 GOLGA6L6A8MZA4 724 aa8.07□□□□□ -1.12
BDNF-211ENST00000439476 STAC3Q96MF2 364 aa8.07□□□□□ -1.12
BDNF-211ENST00000439476 APPP05067 770 aa8.07□□□□□ -1.12
BDNF-211ENST00000439476 PTMAP06454 111 aaKnown RBP8.07□□□□□ -1.12
BDNF-211ENST00000439476 SLC4A3P48751 1232 aa8.07□□□□□ -1.12
BDNF-211ENST00000439476 ZNF526Q8TF50 670 aaPredicted RBP8.07□□□□□ -1.12
BDNF-211ENST00000439476 ANKRD30AQ9BXX3 1397 aa8.07□□□□□ -1.12
BDNF-211ENST00000439476 GSE1Q14687 1217 aa8.06□□□□□ -1.12
BDNF-211ENST00000439476 PDS5BQ9NTI5 1447 aa8.06□□□□□ -1.12
BDNF-211ENST00000439476 SLKQ9H2G2 1235 aaPredicted RBP8.06□□□□□ -1.12
BDNF-211ENST00000439476 HFM1A2PYH4 1435 aa8.05□□□□□ -1.12
BDNF-211ENST00000439476 AKNAQ7Z591 1439 aa8.05□□□□□ -1.12
BDNF-211ENST00000439476 ERCC6Q03468 1493 aa8.05□□□□□ -1.12
BDNF-211ENST00000439476 CUX1P39880 1505 aa8.05□□□□□ -1.12
BDNF-211ENST00000439476 CRBNQ96SW2 442 aa8.05□□□□□ -1.12
BDNF-211ENST00000439476 CFTRP13569 1480 aa8.05□□□□□ -1.12
BDNF-211ENST00000439476 NCOA2Q15596 1464 aa8.05□□□□□ -1.12
BDNF-211ENST00000439476 FYCO1Q9BQS8 1478 aa8.05□□□□□ -1.12
BDNF-211ENST00000439476 NESP48681 1621 aa8.05□□□□□ -1.12
BDNF-211ENST00000439476 IGSF3O75054 1194 aa8.04□□□□□ -1.12
BDNF-211ENST00000439476 GOLGA2Q08379 1002 aa8.04□□□□□ -1.12
BDNF-211ENST00000439476 FANCD2Q9BXW9 1451 aa8.04□□□□□ -1.12
BDNF-211ENST00000439476 KANK1Q14678 1352 aa8.04□□□□□ -1.12
BDNF-211ENST00000439476 NBPF8Q3BBV2 869 aa8.04□□□□□ -1.12
BDNF-211ENST00000439476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.03□□□□□ -1.12
BDNF-211ENST00000439476 FAM161AQ3B820 660 aa8.03□□□□□ -1.12
BDNF-211ENST00000439476 CENPQQ7L2Z9 268 aaPredicted RBP8.03□□□□□ -1.12
BDNF-211ENST00000439476 SPRYD3Q8NCJ5 442 aa8.03□□□□□ -1.12
BDNF-211ENST00000439476 ZNF592Q92610 1267 aa8.03□□□□□ -1.12
BDNF-211ENST00000439476 MAPKBP1O60336 1514 aa8.03□□□□□ -1.12
BDNF-211ENST00000439476 RAD54L2Q9Y4B4 1467 aa8.03□□□□□ -1.12
BDNF-211ENST00000439476 SMG6Q86US8 1419 aaKnown RBP8.02□□□□□ -1.13
BDNF-211ENST00000439476 HSCBQ8IWL3 235 aa8.02□□□□□ -1.13
BDNF-211ENST00000439476 FAM43AQ8N2R8 423 aa8.02□□□□□ -1.13
BDNF-211ENST00000439476 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.02□□□□□ -1.13
BDNF-211ENST00000439476 HDGFP51858 240 aaKnown RBP8.01□□□□□ -1.13
BDNF-211ENST00000439476 DNTTIP2Q5QJE6 756 aaKnown RBP8.01□□□□□ -1.13
BDNF-211ENST00000439476 PANK3Q9H999 370 aa8.01□□□□□ -1.13
BDNF-211ENST00000439476 MCCP23508 829 aa8.01□□□□□ -1.13
BDNF-211ENST00000439476 CALD1Q05682 793 aaKnown RBP8.01□□□□□ -1.13
BDNF-211ENST00000439476 NAIPQ13075 1403 aa8.01□□□□□ -1.13
BDNF-211ENST00000439476 CHAF1AQ13111 956 aaPredicted RBP8.01□□□□□ -1.13
BDNF-211ENST00000439476 ZHX1Q9UKY1 873 aaPredicted RBP8.01□□□□□ -1.13
BDNF-211ENST00000439476 MAP3K1Q13233 1512 aa8.01□□□□□ -1.13
BDNF-211ENST00000439476 ZNF644Q9H582 1327 aaPredicted RBP8.01□□□□□ -1.13
BDNF-211ENST00000439476 C11orf95C9JLR9 678 aaPredicted RBP8.01□□□□□ -1.13
BDNF-211ENST00000439476 FAM193AP78312 1265 aa8.01□□□□□ -1.13
BDNF-211ENST00000439476 PNISRQ8TF01 805 aaKnown RBP8.01□□□□□ -1.13
BDNF-211ENST00000439476 HSP90AB1P08238 724 aaKnown RBP8□□□□□ -1.13
BDNF-211ENST00000439476 GZF1Q9H116 711 aaPredicted RBP8□□□□□ -1.13
BDNF-211ENST00000439476 IPO8O15397 1037 aaKnown RBP8□□□□□ -1.13
BDNF-211ENST00000439476 NFKBIBQ15653 356 aa8□□□□□ -1.13
BDNF-211ENST00000439476 E9PSI1 815 aa8□□□□□ -1.13
BDNF-211ENST00000439476 CCDC146Q8IYE0 955 aa8□□□□□ -1.13
BDNF-211ENST00000439476 BRD4O60885 1362 aaPredicted RBP8□□□□□ -1.13
BDNF-211ENST00000439476 TMED8Q6PL24 325 aaPredicted RBP7.99□□□□□ -1.13
BDNF-211ENST00000439476 BACH2Q9BYV9 841 aa7.99□□□□□ -1.13
BDNF-211ENST00000439476 LAMC3Q9Y6N6 1575 aa7.99□□□□□ -1.13
BDNF-211ENST00000439476 HNRNPMP52272 730 aaKnown RBP eCLIP7.99□□□□□ -1.13
BDNF-211ENST00000439476 TMEM132AQ24JP5 1023 aa7.99□□□□□ -1.13
BDNF-211ENST00000439476 CDCA7LQ96GN5 454 aa7.99□□□□□ -1.13
BDNF-211ENST00000439476 EFCAB5A4FU69 1503 aa7.98□□□□□ -1.13
BDNF-211ENST00000439476 KCNG1Q9UIX4 513 aa7.98□□□□□ -1.13
BDNF-211ENST00000439476 MORC1Q86VD1 984 aa7.98□□□□□ -1.13
BDNF-211ENST00000439476 RWDD1Q9H446 243 aaPredicted RBP7.98□□□□□ -1.13
BDNF-211ENST00000439476 GOLGA6L3A6NEY3 463 aa7.97□□□□□ -1.13
BDNF-211ENST00000439476 IRX3P78415 501 aaPredicted RBP7.97□□□□□ -1.13
BDNF-211ENST00000439476 ZNF830Q96NB3 372 aaPredicted RBP7.97□□□□□ -1.13
BDNF-211ENST00000439476 GBP4Q96PP9 640 aa7.97□□□□□ -1.13
BDNF-211ENST00000439476 PMFBP1Q8TBY8 1022 aa7.97□□□□□ -1.13
BDNF-211ENST00000439476 HDAC5Q9UQL6 1122 aa7.97□□□□□ -1.13
BDNF-211ENST00000439476 PCF11O94913 1555 aaKnown RBP7.97□□□□□ -1.13
BDNF-211ENST00000439476 POGKQ9P215 609 aa7.97□□□□□ -1.13
BDNF-211ENST00000439476 CENPJQ9HC77 1338 aaPredicted RBP7.96□□□□□ -1.13
BDNF-211ENST00000439476 MSNP26038 577 aaKnown RBP7.96□□□□□ -1.13
BDNF-211ENST00000439476 OS9Q13438 667 aaPredicted RBP7.96□□□□□ -1.13
BDNF-211ENST00000439476 SENP3Q9H4L4 574 aaPredicted RBP7.96□□□□□ -1.13
BDNF-211ENST00000439476 U2SURPO15042 1029 aaKnown RBP7.96□□□□□ -1.14
BDNF-211ENST00000439476 GAPVD1Q14C86 1478 aa7.96□□□□□ -1.14
BDNF-211ENST00000439476 PLCD4Q9BRC7 762 aa7.96□□□□□ -1.14
BDNF-211ENST00000439476 PPP6R1Q9UPN7 881 aa7.96□□□□□ -1.14
BDNF-211ENST00000439476 CARMIL2Q6F5E8 1435 aa7.96□□□□□ -1.14
BDNF-211ENST00000439476 EIF3AQ14152 1382 aaKnown RBP7.96□□□□□ -1.14
BDNF-211ENST00000439476 GOLGA6L4A6NEF3 574 aa7.95□□□□□ -1.14
BDNF-211ENST00000439476 SOX12O15370 315 aa7.95□□□□□ -1.14
BDNF-211ENST00000439476 HTATSF1O43719 755 aaKnown RBP7.95□□□□□ -1.14
BDNF-211ENST00000439476 CLUAP1Q96AJ1 413 aa7.95□□□□□ -1.14
BDNF-211ENST00000439476 PRDM4Q9UKN5 801 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms