RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 RWDD1Q9H446 243 aaPredicted RBP18.8■□□□□ 0.6
TSC2-206ENST00000439117 ERICH3Q5RHP9 1530 aa18.8■□□□□ 0.6
TSC2-206ENST00000439117 TOPBP1Q92547 1522 aa18.8■□□□□ 0.6
TSC2-206ENST00000439117 TRAK1Q9UPV9 953 aa18.8■□□□□ 0.6
TSC2-206ENST00000439117 UACAQ9BZF9 1416 aa18.8■□□□□ 0.6
TSC2-206ENST00000439117 ZNF644Q9H582 1327 aaPredicted RBP18.8■□□□□ 0.6
TSC2-206ENST00000439117 FGD1P98174 961 aa18.79■□□□□ 0.6
TSC2-206ENST00000439117 DDX11L8A8MPP1 907 aa18.79■□□□□ 0.6
TSC2-206ENST00000439117 VGFO15240 615 aaPredicted RBP18.79■□□□□ 0.6
TSC2-206ENST00000439117 CUX1P39880 1505 aa18.78■□□□□ 0.6
TSC2-206ENST00000439117 FAM69CQ0P6D2 419 aa18.78■□□□□ 0.6
TSC2-206ENST00000439117 KCNJ4P48050 445 aa18.78■□□□□ 0.6
TSC2-206ENST00000439117 ST20-MTHFSA0A0A6YYL1 179 aa18.78■□□□□ 0.6
TSC2-206ENST00000439117 LRRC9Q6ZRR7 1453 aa18.77■□□□□ 0.6
TSC2-206ENST00000439117 PHLDB1Q86UU1 1377 aa18.76■□□□□ 0.59
TSC2-206ENST00000439117 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
TSC2-206ENST00000439117 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
TSC2-206ENST00000439117 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
TSC2-206ENST00000439117 PDE4AP27815 886 aa18.75■□□□□ 0.59
TSC2-206ENST00000439117 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
TSC2-206ENST00000439117 KIF15Q9NS87 1388 aa18.75■□□□□ 0.59
TSC2-206ENST00000439117 NGDNQ8NEJ9 315 aaKnown RBP18.74■□□□□ 0.59
TSC2-206ENST00000439117 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
TSC2-206ENST00000439117 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
TSC2-206ENST00000439117 OS9Q13438 667 aaPredicted RBP18.73■□□□□ 0.59
TSC2-206ENST00000439117 PRDM2Q13029 1718 aa18.72■□□□□ 0.59
TSC2-206ENST00000439117 FYCO1Q9BQS8 1478 aa18.72■□□□□ 0.59
TSC2-206ENST00000439117 PRXQ9BXM0 1461 aa18.72■□□□□ 0.59
TSC2-206ENST00000439117 IPO8O15397 1037 aaKnown RBP18.72■□□□□ 0.59
TSC2-206ENST00000439117 NCOA2Q15596 1464 aa18.71■□□□□ 0.59
TSC2-206ENST00000439117 CSB-PGBD3P0DP91 1061 aa18.71■□□□□ 0.59
TSC2-206ENST00000439117 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
TSC2-206ENST00000439117 SKOR2Q2VWA4 1001 aaPredicted RBP18.71■□□□□ 0.59
TSC2-206ENST00000439117 NPHP1O15259 732 aa18.7■□□□□ 0.58
TSC2-206ENST00000439117 HTATSF1O43719 755 aaKnown RBP18.7■□□□□ 0.58
TSC2-206ENST00000439117 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
TSC2-206ENST00000439117 SYNJ2O15056 1496 aa18.69■□□□□ 0.58
TSC2-206ENST00000439117 PHF14O94880 888 aa18.69■□□□□ 0.58
TSC2-206ENST00000439117 FAM161AQ3B820 660 aa18.68■□□□□ 0.58
TSC2-206ENST00000439117 NUTM2FA1L443 756 aa18.67■□□□□ 0.58
TSC2-206ENST00000439117 GOLGA6L1Q8N7Z2 621 aa18.67■□□□□ 0.58
TSC2-206ENST00000439117 MFAP1P55081 439 aaKnown RBP18.67■□□□□ 0.58
TSC2-206ENST00000439117 ANKRD50Q9ULJ7 1429 aa18.67■□□□□ 0.58
TSC2-206ENST00000439117 PANK3Q9H999 370 aa18.66■□□□□ 0.58
TSC2-206ENST00000439117 DNMBPQ6XZF7 1577 aa18.66■□□□□ 0.58
TSC2-206ENST00000439117 USP47Q96K76 1375 aa18.66■□□□□ 0.58
TSC2-206ENST00000439117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.65■□□□□ 0.58
TSC2-206ENST00000439117 PKNOX2Q96KN3 472 aa18.65■□□□□ 0.58
TSC2-206ENST00000439117 CSPP1Q1MSJ5 1256 aa18.64■□□□□ 0.58
TSC2-206ENST00000439117 EFCAB5A4FU69 1503 aa18.64■□□□□ 0.57
TSC2-206ENST00000439117 EVC2Q86UK5 1308 aa18.64■□□□□ 0.57
TSC2-206ENST00000439117 CENPQQ7L2Z9 268 aaPredicted RBP18.64■□□□□ 0.57
TSC2-206ENST00000439117 SNAPC4Q5SXM2 1469 aa18.64■□□□□ 0.57
TSC2-206ENST00000439117 AFAP1Q8N556 730 aa18.63■□□□□ 0.57
TSC2-206ENST00000439117 STAC3Q96MF2 364 aa18.62■□□□□ 0.57
TSC2-206ENST00000439117 MAP7D2Q96T17 732 aa18.62■□□□□ 0.57
TSC2-206ENST00000439117 AMPHP49418 695 aa18.62■□□□□ 0.57
TSC2-206ENST00000439117 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.62■□□□□ 0.57
TSC2-206ENST00000439117 CHMP4AQ9BY43 222 aa18.62■□□□□ 0.57
TSC2-206ENST00000439117 KIAA1211Q6ZU35 1233 aa18.61■□□□□ 0.57
TSC2-206ENST00000439117 NAP1L2Q9ULW6 460 aaPredicted RBP18.61■□□□□ 0.57
TSC2-206ENST00000439117 TPM4P67936 248 aa18.61■□□□□ 0.57
TSC2-206ENST00000439117 GOLGA2Q08379 1002 aa18.61■□□□□ 0.57
TSC2-206ENST00000439117 MYBBP1AQ9BQG0 1328 aaKnown RBP18.6■□□□□ 0.57
TSC2-206ENST00000439117 PRKCSHP14314 528 aaPredicted RBP18.6■□□□□ 0.57
TSC2-206ENST00000439117 FAM43AQ8N2R8 423 aa18.6■□□□□ 0.57
TSC2-206ENST00000439117 DDX49Q9Y6V7 483 aaKnown RBP18.6■□□□□ 0.57
TSC2-206ENST00000439117 ARHGAP5Q13017 1502 aa18.6■□□□□ 0.57
TSC2-206ENST00000439117 MTERF4Q7Z6M4 381 aaKnown RBP18.6■□□□□ 0.57
TSC2-206ENST00000439117 ZNF771Q7L3S4 317 aaPredicted RBP18.59■□□□□ 0.57
TSC2-206ENST00000439117 FAM13BQ9NYF5 915 aa18.59■□□□□ 0.57
TSC2-206ENST00000439117 MINK1Q8N4C8 1332 aaPredicted RBP18.59■□□□□ 0.57
TSC2-206ENST00000439117 CCDC146Q8IYE0 955 aa18.58■□□□□ 0.57
TSC2-206ENST00000439117 ZBED9Q6R2W3 1325 aa18.58■□□□□ 0.57
TSC2-206ENST00000439117 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.56
TSC2-206ENST00000439117 SLC4A3P48751 1232 aa18.57■□□□□ 0.56
TSC2-206ENST00000439117 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
TSC2-206ENST00000439117 LMOD3Q0VAK6 560 aa18.57■□□□□ 0.56
TSC2-206ENST00000439117 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.56■□□□□ 0.56
TSC2-206ENST00000439117 ITPRIPQ8IWB1 547 aa18.56■□□□□ 0.56
TSC2-206ENST00000439117 PRKRIP1Q9H875 184 aaPredicted RBP18.56■□□□□ 0.56
TSC2-206ENST00000439117 STK31Q9BXU1 1019 aa18.55■□□□□ 0.56
TSC2-206ENST00000439117 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
TSC2-206ENST00000439117 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
TSC2-206ENST00000439117 ST18O60284 1047 aa18.55■□□□□ 0.56
TSC2-206ENST00000439117 LTV1Q96GA3 475 aaPredicted RBP18.54■□□□□ 0.56
TSC2-206ENST00000439117 COG3Q96JB2 828 aa18.54■□□□□ 0.56
TSC2-206ENST00000439117 TROQ12816 1431 aaPredicted RBP18.54■□□□□ 0.56
TSC2-206ENST00000439117 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
TSC2-206ENST00000439117 SETQ01105 290 aaPredicted RBP18.54■□□□□ 0.56
TSC2-206ENST00000439117 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
TSC2-206ENST00000439117 SMC4Q9NTJ3 1288 aa18.53■□□□□ 0.56
TSC2-206ENST00000439117 KIAA0586Q9BVV6 1533 aa18.52■□□□□ 0.55
TSC2-206ENST00000439117 RRP1P56182 461 aaKnown RBP18.51■□□□□ 0.55
TSC2-206ENST00000439117 CHMP5Q9NZZ3 219 aa18.51■□□□□ 0.55
TSC2-206ENST00000439117 MIA2Q96PC5 1412 aa18.51■□□□□ 0.55
TSC2-206ENST00000439117 CENPJQ9HC77 1338 aaPredicted RBP18.51■□□□□ 0.55
TSC2-206ENST00000439117 NFKBIBQ15653 356 aa18.51■□□□□ 0.55
TSC2-206ENST00000439117 TAOK2Q9UL54 1235 aa18.51■□□□□ 0.55
TSC2-206ENST00000439117 EHBP1L1Q8N3D4 1523 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms