RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 GOLGA6L22H0YM25 854 aa7.86□□□□□ -1.15
BDNF-210ENST00000438929 CFDP1Q9UEE9 299 aaPredicted RBP7.86□□□□□ -1.15
BDNF-210ENST00000438929 WASHC2CQ9Y4E1 1318 aa7.86□□□□□ -1.15
BDNF-210ENST00000438929 ZMYND15Q9H091 742 aa7.86□□□□□ -1.15
BDNF-210ENST00000438929 AQRO60306 1485 aaKnown RBP eCLIP7.86□□□□□ -1.15
BDNF-210ENST00000438929 GOLGA2Q08379 1002 aa7.86□□□□□ -1.15
BDNF-210ENST00000438929 HSCBQ8IWL3 235 aa7.86□□□□□ -1.15
BDNF-210ENST00000438929 CCDC146Q8IYE0 955 aa7.86□□□□□ -1.15
BDNF-210ENST00000438929 CHMP7Q8WUX9 453 aaPredicted RBP7.86□□□□□ -1.15
BDNF-210ENST00000438929 HSP90AB1P08238 724 aaKnown RBP7.85□□□□□ -1.15
BDNF-210ENST00000438929 MFAP1P55081 439 aaKnown RBP7.85□□□□□ -1.15
BDNF-210ENST00000438929 DNTTIP2Q5QJE6 756 aaKnown RBP7.85□□□□□ -1.15
BDNF-210ENST00000438929 PHF23Q9BUL5 403 aaPredicted RBP7.85□□□□□ -1.15
BDNF-210ENST00000438929 ABCA10Q8WWZ4 1543 aa7.85□□□□□ -1.15
BDNF-210ENST00000438929 CLUAP1Q96AJ1 413 aa7.84□□□□□ -1.15
BDNF-210ENST00000438929 IGF1RP08069 1367 aa7.84□□□□□ -1.15
BDNF-210ENST00000438929 FTSJ3Q8IY81 847 aaKnown RBP7.84□□□□□ -1.15
BDNF-210ENST00000438929 STAG3Q9UJ98 1225 aa7.84□□□□□ -1.15
BDNF-210ENST00000438929 GRIN2BQ13224 1484 aa7.84□□□□□ -1.15
BDNF-210ENST00000438929 ERICH3Q5RHP9 1530 aa7.84□□□□□ -1.15
BDNF-210ENST00000438929 C20orf194Q5TEA3 1177 aa7.84□□□□□ -1.15
BDNF-210ENST00000438929 TNNT2P45379 298 aaPredicted RBP7.83□□□□□ -1.16
BDNF-210ENST00000438929 HOMEZQ8IX15 550 aa7.83□□□□□ -1.16
BDNF-210ENST00000438929 FOXD4L1Q9NU39 408 aa7.83□□□□□ -1.16
BDNF-210ENST00000438929 PTMAP06454 111 aaKnown RBP7.83□□□□□ -1.16
BDNF-210ENST00000438929 TAF7LQ5H9L4 462 aa7.83□□□□□ -1.16
BDNF-210ENST00000438929 ROCK2O75116 1388 aaKnown RBP7.83□□□□□ -1.16
BDNF-210ENST00000438929 TIAM1Q13009 1591 aa7.83□□□□□ -1.16
BDNF-210ENST00000438929 TPRNQ4KMQ1 711 aa7.83□□□□□ -1.16
BDNF-210ENST00000438929 C14orf37Q86TY3 774 aa7.83□□□□□ -1.16
BDNF-210ENST00000438929 COG6Q9Y2V7 657 aa7.83□□□□□ -1.16
BDNF-210ENST00000438929 FGD1P98174 961 aa7.82□□□□□ -1.16
BDNF-210ENST00000438929 DHX37Q8IY37 1157 aaKnown RBP7.82□□□□□ -1.16
BDNF-210ENST00000438929 FAM13BQ9NYF5 915 aa7.82□□□□□ -1.16
BDNF-210ENST00000438929 OSCARQ8IYS5 282 aa7.82□□□□□ -1.16
BDNF-210ENST00000438929 MAGI1Q96QZ7 1491 aaPredicted RBP7.81□□□□□ -1.16
BDNF-210ENST00000438929 HFM1A2PYH4 1435 aa7.81□□□□□ -1.16
BDNF-210ENST00000438929 TMF1P82094 1093 aa7.81□□□□□ -1.16
BDNF-210ENST00000438929 BCL2L13Q9BXK5 485 aa7.81□□□□□ -1.16
BDNF-210ENST00000438929 PANK3Q9H999 370 aa7.81□□□□□ -1.16
BDNF-210ENST00000438929 GAPVD1Q14C86 1478 aa7.81□□□□□ -1.16
BDNF-210ENST00000438929 AMER1Q5JTC6 1135 aaPredicted RBP7.8□□□□□ -1.16
BDNF-210ENST00000438929 GBP4Q96PP9 640 aa7.8□□□□□ -1.16
BDNF-210ENST00000438929 NAIPQ13075 1403 aa7.8□□□□□ -1.16
BDNF-210ENST00000438929 NCOA1Q15788 1441 aa7.8□□□□□ -1.16
BDNF-210ENST00000438929 BRD4O60885 1362 aaPredicted RBP7.8□□□□□ -1.16
BDNF-210ENST00000438929 RRP9O43818 475 aaKnown RBP7.79□□□□□ -1.16
BDNF-210ENST00000438929 TRAK2O60296 914 aa7.79□□□□□ -1.16
BDNF-210ENST00000438929 TDRD9Q8NDG6 1382 aaKnown RBP7.79□□□□□ -1.16
BDNF-210ENST00000438929 PAXIP1Q6ZW49 1069 aaPredicted RBP7.79□□□□□ -1.16
BDNF-210ENST00000438929 ADAMTS8Q9UP79 889 aa7.79□□□□□ -1.16
BDNF-210ENST00000438929 MAPK8IP3Q9UPT6 1336 aa7.79□□□□□ -1.16
BDNF-210ENST00000438929 MYOM3Q5VTT5 1437 aa7.79□□□□□ -1.16
BDNF-210ENST00000438929 CLASP1Q7Z460 1538 aa7.78□□□□□ -1.16
BDNF-210ENST00000438929 RBM10P98175 930 aaKnown RBP7.78□□□□□ -1.16
BDNF-210ENST00000438929 NUP155O75694 1391 aa7.78□□□□□ -1.16
BDNF-210ENST00000438929 ADAMTS12P58397 1594 aa7.78□□□□□ -1.16
BDNF-210ENST00000438929 APAF1O14727 1248 aa7.78□□□□□ -1.16
BDNF-210ENST00000438929 MRE11P49959 708 aa7.78□□□□□ -1.16
BDNF-210ENST00000438929 RRAGDQ9NQL2 400 aaPredicted RBP7.78□□□□□ -1.16
BDNF-210ENST00000438929 ZNF644Q9H582 1327 aaPredicted RBP7.78□□□□□ -1.16
BDNF-210ENST00000438929 ESPNB1AK53 854 aa7.78□□□□□ -1.16
BDNF-210ENST00000438929 PLCB2Q00722 1185 aa7.78□□□□□ -1.16
BDNF-210ENST00000438929 PANK2Q9BZ23 570 aa7.78□□□□□ -1.16
BDNF-210ENST00000438929 CHMP5Q9NZZ3 219 aa7.78□□□□□ -1.16
BDNF-210ENST00000438929 CENPJQ9HC77 1338 aaPredicted RBP7.77□□□□□ -1.16
BDNF-210ENST00000438929 DDX11L8A8MPP1 907 aa7.77□□□□□ -1.17
BDNF-210ENST00000438929 PANK1Q8TE04 598 aa7.77□□□□□ -1.17
BDNF-210ENST00000438929 RWDD1Q9H446 243 aaPredicted RBP7.77□□□□□ -1.17
BDNF-210ENST00000438929 SNAPC4Q5SXM2 1469 aa7.77□□□□□ -1.17
BDNF-210ENST00000438929 CEP170Q5SW79 1584 aa7.77□□□□□ -1.17
BDNF-210ENST00000438929 PMFBP1Q8TBY8 1022 aa7.77□□□□□ -1.17
BDNF-210ENST00000438929 DNAJC5Q9H3Z4 198 aa7.77□□□□□ -1.17
BDNF-210ENST00000438929 BCAR3O75815 825 aa7.76□□□□□ -1.17
BDNF-210ENST00000438929 CHGAP10645 457 aaKnown RBP7.76□□□□□ -1.17
BDNF-210ENST00000438929 RRP7AQ9Y3A4 280 aaKnown RBP7.76□□□□□ -1.17
BDNF-210ENST00000438929 NCOA2Q15596 1464 aa7.76□□□□□ -1.17
BDNF-210ENST00000438929 DDX49Q9Y6V7 483 aaKnown RBP7.76□□□□□ -1.17
BDNF-210ENST00000438929 MCM4P33991 863 aa7.75□□□□□ -1.17
BDNF-210ENST00000438929 CGNL1Q0VF96 1302 aa7.75□□□□□ -1.17
BDNF-210ENST00000438929 CDCA8Q53HL2 280 aa7.75□□□□□ -1.17
BDNF-210ENST00000438929 XRCC6P12956 609 aaKnown RBP eCLIP7.75□□□□□ -1.17
BDNF-210ENST00000438929 R3HCC1Q9Y3T6 440 aaKnown RBP7.75□□□□□ -1.17
BDNF-210ENST00000438929 RNF123Q5XPI4 1314 aa7.75□□□□□ -1.17
BDNF-210ENST00000438929 ERCC6L2Q5T890 1561 aa7.75□□□□□ -1.17
BDNF-210ENST00000438929 GRPEL1Q9HAV7 217 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 C8orf34Q49A92 452 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 KIAA1211Q6ZU35 1233 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 PTPRKQ15262 1439 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 SYNJ2O15056 1496 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 SHROOM2Q13796 1616 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 CASKIN1Q8WXD9 1431 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 CHMP4AQ9BY43 222 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 C22orf23Q9BZE7 217 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 RIMBP3CA6NJZ7 1639 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 RIMBP3BA6NNM3 1639 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 RIMBP3Q9UFD9 1639 aa7.74□□□□□ -1.17
BDNF-210ENST00000438929 ITPRIPQ8IWB1 547 aa7.73□□□□□ -1.17
BDNF-210ENST00000438929 MAP3K1Q13233 1512 aa7.73□□□□□ -1.17
BDNF-210ENST00000438929 CARMIL2Q6F5E8 1435 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms