RNA–Protein interactions for RNA: ENST00000438885.2

LINC01649-201, Transcript of long intergenic non-protein coding RNA 1649, humanhuman

TSL 5

Gene LINC01649, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01649-201ENST00000438885 NKX1-1Q15270 411 aaPredicted RBP8.87□□□□□ -0.99
LINC01649-201ENST00000438885 ZNF787Q6DD87 383 aa8.87□□□□□ -0.99
LINC01649-201ENST00000438885 LAPTM4BQ86VI4 370 aa8.87□□□□□ -0.99
LINC01649-201ENST00000438885 PPP1R3GB7ZBB8 358 aa8.86□□□□□ -0.99
LINC01649-201ENST00000438885 PDE4AP27815 886 aa8.85□□□□□ -0.99
LINC01649-201ENST00000438885 WBP1LQ9NX94 342 aa8.85□□□□□ -0.99
LINC01649-201ENST00000438885 EVI5O60447 810 aa8.83□□□□□ -1
LINC01649-201ENST00000438885 PROX2Q3B8N5 592 aa8.83□□□□□ -1
LINC01649-201ENST00000438885 ZFRQ96KR1 1074 aaKnown RBP8.83□□□□□ -1
LINC01649-201ENST00000438885 NCKAP5LQ9HCH0 1330 aa8.83□□□□□ -1
LINC01649-201ENST00000438885 ZNF775Q96BV0 537 aaPredicted RBP8.8□□□□□ -1
LINC01649-201ENST00000438885 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
LINC01649-201ENST00000438885 DDX27Q96GQ7 796 aaKnown RBP8.79□□□□□ -1
LINC01649-201ENST00000438885 TSR3Q9UJK0 312 aaKnown RBP8.78□□□□□ -1
LINC01649-201ENST00000438885 MFSD10Q14728 455 aa8.77□□□□□ -1
LINC01649-201ENST00000438885 KIAA1468Q9P260 1216 aa8.77□□□□□ -1
LINC01649-201ENST00000438885 COL9A1P20849 921 aa8.77□□□□□ -1.01
LINC01649-201ENST00000438885 MAP3K9P80192 1104 aa8.76□□□□□ -1.01
LINC01649-201ENST00000438885 FBXW7Q969H0 707 aa8.76□□□□□ -1.01
LINC01649-201ENST00000438885 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.76□□□□□ -1.01
LINC01649-201ENST00000438885 HPS5Q9UPZ3 1129 aa8.76□□□□□ -1.01
LINC01649-201ENST00000438885 V9GY48 417 aaPredicted RBP8.76□□□□□ -1.01
LINC01649-201ENST00000438885 LRCH3Q96II8 777 aa8.75□□□□□ -1.01
LINC01649-201ENST00000438885 ONECUT3O60422 494 aaPredicted RBP8.74□□□□□ -1.01
LINC01649-201ENST00000438885 LARP6Q9BRS8 491 aaKnown RBP8.74□□□□□ -1.01
LINC01649-201ENST00000438885 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
LINC01649-201ENST00000438885 SEPT9Q9UHD8 586 aaPredicted RBP8.73□□□□□ -1.01
LINC01649-201ENST00000438885 PCDHGA10Q9Y5H3 936 aa8.73□□□□□ -1.01
LINC01649-201ENST00000438885 PHF14O94880 888 aa8.72□□□□□ -1.01
LINC01649-201ENST00000438885 FAM98CQ17RN3 349 aaKnown RBP8.72□□□□□ -1.01
LINC01649-201ENST00000438885 TYW1BQ6NUM6 668 aa8.72□□□□□ -1.01
LINC01649-201ENST00000438885 PDZRN3Q9UPQ7 1066 aa8.72□□□□□ -1.01
LINC01649-201ENST00000438885 EMILIN3Q9NT22 766 aa8.69□□□□□ -1.02
LINC01649-201ENST00000438885 PPP4CP60510 307 aa8.68□□□□□ -1.02
LINC01649-201ENST00000438885 PPP1R18Q6NYC8 613 aa8.68□□□□□ -1.02
LINC01649-201ENST00000438885 CFAP44Q96MT7 982 aa8.68□□□□□ -1.02
LINC01649-201ENST00000438885 BBXQ8WY36 941 aaPredicted RBP8.67□□□□□ -1.02
LINC01649-201ENST00000438885 EPAS1Q99814 870 aa8.67□□□□□ -1.02
LINC01649-201ENST00000438885 TRIM6-TRIM34B2RNG4 842 aa8.66□□□□□ -1.02
LINC01649-201ENST00000438885 TJAP1Q5JTD0 557 aa8.66□□□□□ -1.02
LINC01649-201ENST00000438885 PAXIP1Q6ZW49 1069 aaPredicted RBP8.66□□□□□ -1.02
LINC01649-201ENST00000438885 CCDC180Q9P1Z9 1646 aa8.66□□□□□ -1.02
LINC01649-201ENST00000438885 IL21Q9HBE4 155 aa8.64□□□□□ -1.03
LINC01649-201ENST00000438885 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.64□□□□□ -1.03
LINC01649-201ENST00000438885 HRCP23327 699 aa8.63□□□□□ -1.03
LINC01649-201ENST00000438885 C6orf132Q5T0Z8 1188 aa8.63□□□□□ -1.03
LINC01649-201ENST00000438885 CADPS2Q86UW7 1296 aa8.62□□□□□ -1.03
LINC01649-201ENST00000438885 MTRQ99707 1265 aa8.62□□□□□ -1.03
LINC01649-201ENST00000438885 CAMK2BQ13554 666 aa8.61□□□□□ -1.03
LINC01649-201ENST00000438885 SPRYD3Q8NCJ5 442 aa8.6□□□□□ -1.03
LINC01649-201ENST00000438885 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.6□□□□□ -1.03
LINC01649-201ENST00000438885 GGCXP38435 758 aa8.58□□□□□ -1.04
LINC01649-201ENST00000438885 PACS2Q86VP3 889 aa8.58□□□□□ -1.04
LINC01649-201ENST00000438885 PKDCCQ504Y2 493 aa8.57□□□□□ -1.04
LINC01649-201ENST00000438885 MYT1Q01538 1121 aa8.56□□□□□ -1.04
LINC01649-201ENST00000438885 ABCC9O60706 1549 aa8.55□□□□□ -1.04
LINC01649-201ENST00000438885 ZNF516Q92618 1163 aa8.55□□□□□ -1.04
LINC01649-201ENST00000438885 DPYSL4O14531 572 aa8.54□□□□□ -1.04
LINC01649-201ENST00000438885 SAMD7Q7Z3H4 446 aa8.54□□□□□ -1.04
LINC01649-201ENST00000438885 TREML4Q6UXN2 200 aa8.53□□□□□ -1.04
LINC01649-201ENST00000438885 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
LINC01649-201ENST00000438885 DGAT1O75907 488 aa8.52□□□□□ -1.05
LINC01649-201ENST00000438885 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.05
LINC01649-201ENST00000438885 POTECB2RU33 542 aa8.51□□□□□ -1.05
LINC01649-201ENST00000438885 TMUB1Q9BVT8 246 aa8.51□□□□□ -1.05
LINC01649-201ENST00000438885 TSHZ2Q9NRE2 1034 aa8.51□□□□□ -1.05
LINC01649-201ENST00000438885 TSKSQ9UJT2 592 aa8.51□□□□□ -1.05
LINC01649-201ENST00000438885 NKX2-3Q8TAU0 364 aa8.5□□□□□ -1.05
LINC01649-201ENST00000438885 NBR1Q14596 966 aa8.49□□□□□ -1.05
LINC01649-201ENST00000438885 PDIA6Q15084 440 aa8.49□□□□□ -1.05
LINC01649-201ENST00000438885 DDX12PQ92771 950 aa8.49□□□□□ -1.05
LINC01649-201ENST00000438885 MAP3K7O43318 606 aa8.48□□□□□ -1.05
LINC01649-201ENST00000438885 CERKQ8TCT0 537 aa8.48□□□□□ -1.05
LINC01649-201ENST00000438885 SPDYE16A6NNV3 312 aaPredicted RBP8.47□□□□□ -1.05
LINC01649-201ENST00000438885 RNF40O75150 1001 aa8.47□□□□□ -1.05
LINC01649-201ENST00000438885 HDGFP51858 240 aaKnown RBP8.47□□□□□ -1.05
LINC01649-201ENST00000438885 TRIM67Q6ZTA4 783 aa8.47□□□□□ -1.05
LINC01649-201ENST00000438885 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.05
LINC01649-201ENST00000438885 SMAPO00193 183 aa8.45□□□□□ -1.06
LINC01649-201ENST00000438885 SLC19A1P41440 591 aa8.45□□□□□ -1.06
LINC01649-201ENST00000438885 APLP1P51693 650 aa8.45□□□□□ -1.06
LINC01649-201ENST00000438885 NBPF26B4DH59 902 aa8.45□□□□□ -1.06
LINC01649-201ENST00000438885 TSR1Q2NL82 804 aaKnown RBP8.45□□□□□ -1.06
LINC01649-201ENST00000438885 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
LINC01649-201ENST00000438885 STK17AQ9UEE5 414 aa8.45□□□□□ -1.06
LINC01649-201ENST00000438885 PRSS12P56730 875 aa8.44□□□□□ -1.06
LINC01649-201ENST00000438885 PRR20EP86478 221 aa8.44□□□□□ -1.06
LINC01649-201ENST00000438885 PRR20CP86479 221 aa8.44□□□□□ -1.06
LINC01649-201ENST00000438885 PRR20DP86480 221 aa8.44□□□□□ -1.06
LINC01649-201ENST00000438885 PRR20BP86481 221 aa8.44□□□□□ -1.06
LINC01649-201ENST00000438885 PRR20AP86496 221 aa8.44□□□□□ -1.06
LINC01649-201ENST00000438885 CDCA7LQ96GN5 454 aa8.44□□□□□ -1.06
LINC01649-201ENST00000438885 FAM187AA6NFU0 413 aa8.43□□□□□ -1.06
LINC01649-201ENST00000438885 COPS2P61201 443 aa8.43□□□□□ -1.06
LINC01649-201ENST00000438885 RBM27Q9P2N5 1060 aaKnown RBP8.42□□□□□ -1.06
LINC01649-201ENST00000438885 ZNF598Q86UK7 904 aaKnown RBP8.41□□□□□ -1.06
LINC01649-201ENST00000438885 SPRYD7Q5W111 196 aa8.4□□□□□ -1.06
LINC01649-201ENST00000438885 TATDN2Q93075 761 aa8.4□□□□□ -1.06
LINC01649-201ENST00000438885 PNMA3Q9UL41 463 aa8.4□□□□□ -1.06
LINC01649-201ENST00000438885 ZPR1O75312 459 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms