RNA–Protein interactions for RNA: ENST00000438885.2

LINC01649-201, Transcript of long intergenic non-protein coding RNA 1649, humanhuman

TSL 5

Gene LINC01649, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01649-201ENST00000438885 AEBP2Q6ZN18 517 aaPredicted RBP23.05■■□□□ 1.28
LINC01649-201ENST00000438885 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
LINC01649-201ENST00000438885 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
LINC01649-201ENST00000438885 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
LINC01649-201ENST00000438885 FOXD1Q16676 465 aa18.52■□□□□ 0.55
LINC01649-201ENST00000438885 POTEDQ86YR6 584 aa18.14■□□□□ 0.5
LINC01649-201ENST00000438885 MSH5O43196 834 aa17.63■□□□□ 0.41
LINC01649-201ENST00000438885 PIAS4Q8N2W9 510 aaPredicted RBP17.21■□□□□ 0.35
LINC01649-201ENST00000438885 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
LINC01649-201ENST00000438885 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
LINC01649-201ENST00000438885 ADRA2BP18089 450 aa16.77■□□□□ 0.28
LINC01649-201ENST00000438885 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
LINC01649-201ENST00000438885 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
LINC01649-201ENST00000438885 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
LINC01649-201ENST00000438885 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
LINC01649-201ENST00000438885 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0
LINC01649-201ENST00000438885 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
LINC01649-201ENST00000438885 HOXD11P31277 338 aaPredicted RBP14.81□□□□□ -0.04
LINC01649-201ENST00000438885 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
LINC01649-201ENST00000438885 PPP4R3CPQ6ZMV5 832 aa14.68□□□□□ -0.06
LINC01649-201ENST00000438885 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
LINC01649-201ENST00000438885 CNKSR2Q8WXI2 1034 aa14.56□□□□□ -0.08
LINC01649-201ENST00000438885 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
LINC01649-201ENST00000438885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC01649-201ENST00000438885 POTEHQ6S545 545 aa14.12□□□□□ -0.15
LINC01649-201ENST00000438885 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
LINC01649-201ENST00000438885 CAPN15O75808 1086 aa13.79□□□□□ -0.2
LINC01649-201ENST00000438885 DSG3P32926 999 aa13.79□□□□□ -0.2
LINC01649-201ENST00000438885 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
LINC01649-201ENST00000438885 SPINK5Q9NQ38 1064 aaPredicted RBP13.72□□□□□ -0.21
LINC01649-201ENST00000438885 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
LINC01649-201ENST00000438885 APLP2Q06481 763 aa13.42□□□□□ -0.26
LINC01649-201ENST00000438885 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
LINC01649-201ENST00000438885 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
LINC01649-201ENST00000438885 ABCB7O75027 752 aa13.38□□□□□ -0.27
LINC01649-201ENST00000438885 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
LINC01649-201ENST00000438885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
LINC01649-201ENST00000438885 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
LINC01649-201ENST00000438885 SLC4A2P04920 1241 aa13.22□□□□□ -0.29
LINC01649-201ENST00000438885 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
LINC01649-201ENST00000438885 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
LINC01649-201ENST00000438885 KCNA4P22459 653 aa13.06□□□□□ -0.32
LINC01649-201ENST00000438885 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
LINC01649-201ENST00000438885 POLA2Q14181 598 aa12.91□□□□□ -0.34
LINC01649-201ENST00000438885 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
LINC01649-201ENST00000438885 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
LINC01649-201ENST00000438885 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
LINC01649-201ENST00000438885 HAX1O00165 279 aa12.67□□□□□ -0.38
LINC01649-201ENST00000438885 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
LINC01649-201ENST00000438885 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
LINC01649-201ENST00000438885 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC01649-201ENST00000438885 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
LINC01649-201ENST00000438885 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
LINC01649-201ENST00000438885 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
LINC01649-201ENST00000438885 EVX2Q03828 476 aa12.37□□□□□ -0.43
LINC01649-201ENST00000438885 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
LINC01649-201ENST00000438885 SLC4A1APQ9BWU0 796 aaKnown RBP12.33□□□□□ -0.44
LINC01649-201ENST00000438885 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.46
LINC01649-201ENST00000438885 SPDYE2BA6NHP3 402 aa12.17□□□□□ -0.46
LINC01649-201ENST00000438885 SPDYE6P0CI01 402 aa12.17□□□□□ -0.46
LINC01649-201ENST00000438885 SPDYE2Q495Y8 402 aa12.17□□□□□ -0.46
LINC01649-201ENST00000438885 LHX8Q68G74 356 aa12.17□□□□□ -0.46
LINC01649-201ENST00000438885 C19orf67A6NJJ6 358 aa12.14□□□□□ -0.47
LINC01649-201ENST00000438885 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
LINC01649-201ENST00000438885 GABBR2O75899 941 aa12.12□□□□□ -0.47
LINC01649-201ENST00000438885 SPDYE1Q8NFV5 336 aaPredicted RBP12.12□□□□□ -0.47
LINC01649-201ENST00000438885 FBLN2P98095 1184 aa12.09□□□□□ -0.47
LINC01649-201ENST00000438885 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
LINC01649-201ENST00000438885 ZBTB22O15209 634 aa11.98□□□□□ -0.49
LINC01649-201ENST00000438885 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
LINC01649-201ENST00000438885 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
LINC01649-201ENST00000438885 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
LINC01649-201ENST00000438885 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
LINC01649-201ENST00000438885 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
LINC01649-201ENST00000438885 MKRN4PQ13434 485 aaPredicted RBP11.82□□□□□ -0.52
LINC01649-201ENST00000438885 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
LINC01649-201ENST00000438885 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
LINC01649-201ENST00000438885 CLCN6P51797 869 aa11.79□□□□□ -0.52
LINC01649-201ENST00000438885 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC01649-201ENST00000438885 DCBLD2Q96PD2 775 aa11.72□□□□□ -0.53
LINC01649-201ENST00000438885 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
LINC01649-201ENST00000438885 ZNF579Q8NAF0 562 aaKnown RBP11.56□□□□□ -0.56
LINC01649-201ENST00000438885 ZRANB1Q9UGI0 708 aa11.54□□□□□ -0.56
LINC01649-201ENST00000438885 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
LINC01649-201ENST00000438885 POTEMA6NI47 508 aa11.49□□□□□ -0.57
LINC01649-201ENST00000438885 EHMT2Q96KQ7 1210 aa11.49□□□□□ -0.57
LINC01649-201ENST00000438885 GALR2O43603 387 aaPredicted RBP11.44□□□□□ -0.58
LINC01649-201ENST00000438885 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
LINC01649-201ENST00000438885 POTEB2H3BUK9 544 aa11.4□□□□□ -0.58
LINC01649-201ENST00000438885 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
LINC01649-201ENST00000438885 PCDH10Q9P2E7 1040 aa11.38□□□□□ -0.59
LINC01649-201ENST00000438885 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
LINC01649-201ENST00000438885 CSRNP3Q8WYN3 585 aa11.35□□□□□ -0.59
LINC01649-201ENST00000438885 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
LINC01649-201ENST00000438885 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
LINC01649-201ENST00000438885 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
LINC01649-201ENST00000438885 MAMSTRQ6ZN01 415 aa11.23□□□□□ -0.61
LINC01649-201ENST00000438885 METRNQ9UJH8 293 aa11.23□□□□□ -0.61
LINC01649-201ENST00000438885 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC01649-201ENST00000438885 SLC39A7Q92504 469 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms