RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
TTC3-209ENST00000438055 ARHGAP5Q13017 1502 aa22.35■■□□□ 1.17
TTC3-209ENST00000438055 PANK3Q9H999 370 aa22.34■■□□□ 1.17
TTC3-209ENST00000438055 BCORL1Q5H9F3 1711 aa22.33■■□□□ 1.17
TTC3-209ENST00000438055 TMF1P82094 1093 aa22.33■■□□□ 1.16
TTC3-209ENST00000438055 SHANK2Q9UPX8 1470 aa22.32■■□□□ 1.16
TTC3-209ENST00000438055 ABCA8O94911 1581 aa22.31■■□□□ 1.16
TTC3-209ENST00000438055 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
TTC3-209ENST00000438055 UHRF1BP1Q6BDS2 1440 aa22.31■■□□□ 1.16
TTC3-209ENST00000438055 EFCAB2Q5VUJ9 269 aa22.31■■□□□ 1.16
TTC3-209ENST00000438055 BRD4O60885 1362 aaPredicted RBP22.31■■□□□ 1.16
TTC3-209ENST00000438055 RCAN3Q9UKA8 241 aa22.31■■□□□ 1.16
TTC3-209ENST00000438055 ANP32AP39687 249 aaKnown RBP22.3■■□□□ 1.16
TTC3-209ENST00000438055 KDM5CP41229 1560 aa22.28■■□□□ 1.16
TTC3-209ENST00000438055 CDC42BPAQ5VT25 1732 aa22.28■■□□□ 1.16
TTC3-209ENST00000438055 EXOC6Q8TAG9 804 aa22.27■■□□□ 1.16
TTC3-209ENST00000438055 ADCY10Q96PN6 1610 aa22.27■■□□□ 1.16
TTC3-209ENST00000438055 FAM135AQ9P2D6 1515 aa22.27■■□□□ 1.16
TTC3-209ENST00000438055 NBR1Q14596 966 aa22.26■■□□□ 1.15
TTC3-209ENST00000438055 CDCA7LQ96GN5 454 aa22.26■■□□□ 1.15
TTC3-209ENST00000438055 PLEKHH2Q8IVE3 1493 aa22.26■■□□□ 1.15
TTC3-209ENST00000438055 KNSTRNQ9Y448 316 aa22.25■■□□□ 1.15
TTC3-209ENST00000438055 SYCP2Q9BX26 1530 aa22.25■■□□□ 1.15
TTC3-209ENST00000438055 RRP1P56182 461 aaKnown RBP22.24■■□□□ 1.15
TTC3-209ENST00000438055 ARHGEF12Q9NZN5 1544 aa22.24■■□□□ 1.15
TTC3-209ENST00000438055 CROCC2H7BZ55 1655 aa22.24■■□□□ 1.15
TTC3-209ENST00000438055 AFAP1Q8N556 730 aa22.24■■□□□ 1.15
TTC3-209ENST00000438055 PLIN1O60240 522 aa22.23■■□□□ 1.15
TTC3-209ENST00000438055 WDR43Q15061 677 aaKnown RBP eCLIP22.22■■□□□ 1.15
TTC3-209ENST00000438055 SPAG9O60271 1321 aaKnown RBP22.22■■□□□ 1.15
TTC3-209ENST00000438055 PRAG1Q86YV5 1406 aa22.21■■□□□ 1.15
TTC3-209ENST00000438055 NOP58Q9Y2X3 529 aaKnown RBP22.2■■□□□ 1.14
TTC3-209ENST00000438055 DISP3Q9P2K9 1392 aa22.2■■□□□ 1.14
TTC3-209ENST00000438055 CHGAP10645 457 aaKnown RBP22.19■■□□□ 1.14
TTC3-209ENST00000438055 SAMD9LQ8IVG5 1584 aa22.17■■□□□ 1.14
TTC3-209ENST00000438055 TESK2Q96S53 571 aa22.16■■□□□ 1.14
TTC3-209ENST00000438055 PER1O15534 1290 aaPredicted RBP22.15■■□□□ 1.14
TTC3-209ENST00000438055 ZBTB47Q9UFB7 747 aaPredicted RBP22.15■■□□□ 1.14
TTC3-209ENST00000438055 KIF3BO15066 747 aa22.14■■□□□ 1.14
TTC3-209ENST00000438055 PDE3BQ13370 1112 aa22.14■■□□□ 1.14
TTC3-209ENST00000438055 ERBINQ96RT1 1412 aa22.14■■□□□ 1.13
TTC3-209ENST00000438055 LRPPRCP42704 1394 aaKnown RBP22.13■■□□□ 1.13
TTC3-209ENST00000438055 ARHGEF5Q12774 1597 aa22.13■■□□□ 1.13
TTC3-209ENST00000438055 A2MP01023 1474 aa22.13■■□□□ 1.13
TTC3-209ENST00000438055 POLR1AO95602 1720 aaPredicted RBP22.12■■□□□ 1.13
TTC3-209ENST00000438055 RNF123Q5XPI4 1314 aa22.11■■□□□ 1.13
TTC3-209ENST00000438055 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
TTC3-209ENST00000438055 KDM5DQ9BY66 1539 aa22.11■■□□□ 1.13
TTC3-209ENST00000438055 PARD3Q8TEW0 1356 aa22.11■■□□□ 1.13
TTC3-209ENST00000438055 PLA2R1Q13018 1463 aa22.1■■□□□ 1.13
TTC3-209ENST00000438055 PAK3O75914 559 aaPredicted RBP22.1■■□□□ 1.13
TTC3-209ENST00000438055 CDCA8Q53HL2 280 aa22.1■■□□□ 1.13
TTC3-209ENST00000438055 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
TTC3-209ENST00000438055 TTC37Q6PGP7 1564 aa22.07■■□□□ 1.12
TTC3-209ENST00000438055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.06■■□□□ 1.128e-9■■■■□ 23.3
TTC3-209ENST00000438055 CCDC146Q8IYE0 955 aa22.06■■□□□ 1.12
TTC3-209ENST00000438055 SENP3Q9H4L4 574 aaPredicted RBP22.06■■□□□ 1.12
TTC3-209ENST00000438055 CRBNQ96SW2 442 aa22.05■■□□□ 1.12
TTC3-209ENST00000438055 TRAPPC8Q9Y2L5 1435 aa22.05■■□□□ 1.12
TTC3-209ENST00000438055 WASHC2CQ9Y4E1 1318 aa22.04■■□□□ 1.12
TTC3-209ENST00000438055 CDC42BPBQ9Y5S2 1711 aa22.04■■□□□ 1.12
TTC3-209ENST00000438055 IPO9Q96P70 1041 aaKnown RBP22.04■■□□□ 1.12
TTC3-209ENST00000438055 PREX2Q70Z35 1606 aa22.04■■□□□ 1.12
TTC3-209ENST00000438055 KANK1Q14678 1352 aa22.03■■□□□ 1.12
TTC3-209ENST00000438055 PPP2R1AP30153 589 aa22.03■■□□□ 1.12
TTC3-209ENST00000438055 BCL11AQ9H165 835 aa22.03■■□□□ 1.12
TTC3-209ENST00000438055 SKAP1Q86WV1 359 aa22.02■■□□□ 1.12
TTC3-209ENST00000438055 ERCC6L2Q5T890 1561 aa22.02■■□□□ 1.12
TTC3-209ENST00000438055 GPRASP1Q5JY77 1395 aa22.01■■□□□ 1.11
TTC3-209ENST00000438055 TNNT2P45379 298 aaPredicted RBP22.01■■□□□ 1.11
TTC3-209ENST00000438055 COL17A1Q9UMD9 1497 aaPredicted RBP22.01■■□□□ 1.11
TTC3-209ENST00000438055 PLCH2O75038 1416 aa22.01■■□□□ 1.11
TTC3-209ENST00000438055 TCERG1O14776 1098 aaKnown RBP22■■□□□ 1.11
TTC3-209ENST00000438055 CFAP70Q5T0N1 1121 aa22■■□□□ 1.11
TTC3-209ENST00000438055 DUOX2Q9NRD8 1548 aa21.99■■□□□ 1.11
TTC3-209ENST00000438055 PDE4AP27815 886 aa21.98■■□□□ 1.11
TTC3-209ENST00000438055 ABCC2Q92887 1545 aa21.98■■□□□ 1.11
TTC3-209ENST00000438055 GOLGA2Q08379 1002 aa21.96■■□□□ 1.11
TTC3-209ENST00000438055 NEUROD2Q15784 382 aa21.95■■□□□ 1.1
TTC3-209ENST00000438055 C20orf194Q5TEA3 1177 aa21.95■■□□□ 1.1
TTC3-209ENST00000438055 GGT6Q6P531 493 aa21.95■■□□□ 1.1
TTC3-209ENST00000438055 DEKP35659 375 aaKnown RBP21.94■■□□□ 1.1
TTC3-209ENST00000438055 SCAPERQ9BY12 1400 aa21.94■■□□□ 1.1
TTC3-209ENST00000438055 LAS1LQ9Y4W2 734 aaKnown RBP21.94■■□□□ 1.1
TTC3-209ENST00000438055 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.94■■□□□ 1.1
TTC3-209ENST00000438055 CHD1O14646 1710 aa21.94■■□□□ 1.1
TTC3-209ENST00000438055 TRPM1Q7Z4N2 1603 aa21.93■■□□□ 1.1
TTC3-209ENST00000438055 APAF1O14727 1248 aa21.93■■□□□ 1.1
TTC3-209ENST00000438055 CANXP27824 592 aaKnown RBP21.93■■□□□ 1.1
TTC3-209ENST00000438055 DAXXQ9UER7 740 aaPredicted RBP21.93■■□□□ 1.1
TTC3-209ENST00000438055 NPM1P06748 294 aaKnown RBP eCLIP21.92■■□□□ 1.1
TTC3-209ENST00000438055 EIF3AQ14152 1382 aaKnown RBP21.91■■□□□ 1.1
TTC3-209ENST00000438055 AMER1Q5JTC6 1135 aaPredicted RBP21.91■■□□□ 1.1
TTC3-209ENST00000438055 TRAK1Q9UPV9 953 aa21.9■■□□□ 1.1
TTC3-209ENST00000438055 RGS3P49796 1198 aa21.9■■□□□ 1.1
TTC3-209ENST00000438055 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
TTC3-209ENST00000438055 MYO5CQ9NQX4 1742 aa21.88■■□□□ 1.09
TTC3-209ENST00000438055 ADGRF5Q8IZF2 1346 aa21.87■■□□□ 1.09
TTC3-209ENST00000438055 MAST1Q9Y2H9 1570 aa21.86■■□□□ 1.09
TTC3-209ENST00000438055 UNC13BO14795 1591 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms