RNA–Protein interactions for RNA: ENST00000437379.2

HDAC11-213, Transcript of histone deacetylase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HDAC11, Length 2,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-213ENST00000437379 PTPRGP23470 1445 aa19.55■□□□□ 0.72
HDAC11-213ENST00000437379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.72
HDAC11-213ENST00000437379 NBPF1Q3BBV0 1214 aa19.53■□□□□ 0.72
HDAC11-213ENST00000437379 SAMD9LQ8IVG5 1584 aa19.52■□□□□ 0.72
HDAC11-213ENST00000437379 SALL2Q9Y467 1007 aaPredicted RBP19.52■□□□□ 0.72
HDAC11-213ENST00000437379 FAM135AQ9P2D6 1515 aa19.51■□□□□ 0.71
HDAC11-213ENST00000437379 RNF123Q5XPI4 1314 aa19.51■□□□□ 0.71
HDAC11-213ENST00000437379 CCDC141Q6ZP82 1450 aa19.5■□□□□ 0.71
HDAC11-213ENST00000437379 ARHGEF5Q12774 1597 aa19.5■□□□□ 0.71
HDAC11-213ENST00000437379 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
HDAC11-213ENST00000437379 MYBBP1AQ9BQG0 1328 aaKnown RBP19.49■□□□□ 0.71
HDAC11-213ENST00000437379 CDC42BPBQ9Y5S2 1711 aa19.49■□□□□ 0.71
HDAC11-213ENST00000437379 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
HDAC11-213ENST00000437379 LRPPRCP42704 1394 aaKnown RBP19.47■□□□□ 0.71
HDAC11-213ENST00000437379 RALBP1Q15311 655 aa19.46■□□□□ 0.71
HDAC11-213ENST00000437379 PRAG1Q86YV5 1406 aa19.46■□□□□ 0.71
HDAC11-213ENST00000437379 SYCP2Q9BX26 1530 aa19.46■□□□□ 0.71
HDAC11-213ENST00000437379 BRD4O60885 1362 aaPredicted RBP19.45■□□□□ 0.7
HDAC11-213ENST00000437379 PLA2R1Q13018 1463 aa19.44■□□□□ 0.7
HDAC11-213ENST00000437379 MYT1LQ9UL68 1186 aa19.44■□□□□ 0.7
HDAC11-213ENST00000437379 PREX2Q70Z35 1606 aa19.43■□□□□ 0.7
HDAC11-213ENST00000437379 ARHGAP5Q13017 1502 aa19.41■□□□□ 0.7
HDAC11-213ENST00000437379 E9PCH4 1651 aa19.41■□□□□ 0.7
HDAC11-213ENST00000437379 NOP58Q9Y2X3 529 aaKnown RBP19.41■□□□□ 0.7
HDAC11-213ENST00000437379 TTC37Q6PGP7 1564 aa19.41■□□□□ 0.7
HDAC11-213ENST00000437379 RSPH4AQ5TD94 716 aa19.41■□□□□ 0.7
HDAC11-213ENST00000437379 TRPM1Q7Z4N2 1603 aa19.41■□□□□ 0.7
HDAC11-213ENST00000437379 PER1O15534 1290 aaPredicted RBP19.4■□□□□ 0.7
HDAC11-213ENST00000437379 CC2D1BQ5T0F9 858 aaKnown RBP19.4■□□□□ 0.7
HDAC11-213ENST00000437379 A2MP01023 1474 aa19.4■□□□□ 0.7
HDAC11-213ENST00000437379 PLEKHH2Q8IVE3 1493 aa19.39■□□□□ 0.7
HDAC11-213ENST00000437379 KTN1Q86UP2 1357 aaKnown RBP19.39■□□□□ 0.69
HDAC11-213ENST00000437379 DISP3Q9P2K9 1392 aa19.39■□□□□ 0.69
HDAC11-213ENST00000437379 NLRP13Q86W25 1043 aa19.39■□□□□ 0.69
HDAC11-213ENST00000437379 PARD3Q8TEW0 1356 aa19.38■□□□□ 0.69
HDAC11-213ENST00000437379 TESK2Q96S53 571 aa19.38■□□□□ 0.69
HDAC11-213ENST00000437379 DEKP35659 375 aaKnown RBP19.37■□□□□ 0.69
HDAC11-213ENST00000437379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.37■□□□□ 0.69
HDAC11-213ENST00000437379 CDCA7LQ96GN5 454 aa19.36■□□□□ 0.69
HDAC11-213ENST00000437379 RRP1P56182 461 aaKnown RBP19.35■□□□□ 0.69
HDAC11-213ENST00000437379 EXOC6Q8TAG9 804 aa19.35■□□□□ 0.69
HDAC11-213ENST00000437379 PAK3O75914 559 aaPredicted RBP19.35■□□□□ 0.69
HDAC11-213ENST00000437379 PANK3Q9H999 370 aa19.35■□□□□ 0.69
HDAC11-213ENST00000437379 NBR1Q14596 966 aa19.34■□□□□ 0.69
HDAC11-213ENST00000437379 RCAN3Q9UKA8 241 aa19.34■□□□□ 0.69
HDAC11-213ENST00000437379 ERCC6L2Q5T890 1561 aa19.33■□□□□ 0.68
HDAC11-213ENST00000437379 GPRASP1Q5JY77 1395 aa19.33■□□□□ 0.68
HDAC11-213ENST00000437379 UNC13BO14795 1591 aa19.33■□□□□ 0.68
HDAC11-213ENST00000437379 ANP32AP39687 249 aaKnown RBP19.32■□□□□ 0.68
HDAC11-213ENST00000437379 COL17A1Q9UMD9 1497 aaPredicted RBP19.31■□□□□ 0.68
HDAC11-213ENST00000437379 CHD1O14646 1710 aa19.3■□□□□ 0.68
HDAC11-213ENST00000437379 ERBINQ96RT1 1412 aa19.29■□□□□ 0.68
HDAC11-213ENST00000437379 MAST1Q9Y2H9 1570 aa19.29■□□□□ 0.68
HDAC11-213ENST00000437379 PRDM15P57071 1507 aaPredicted RBP19.29■□□□□ 0.68
HDAC11-213ENST00000437379 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
HDAC11-213ENST00000437379 PLIN1O60240 522 aa19.27■□□□□ 0.68
HDAC11-213ENST00000437379 IQGAP3Q86VI3 1631 aa19.27■□□□□ 0.68
HDAC11-213ENST00000437379 TMF1P82094 1093 aa19.27■□□□□ 0.67
HDAC11-213ENST00000437379 IPO9Q96P70 1041 aaKnown RBP19.27■□□□□ 0.67
HDAC11-213ENST00000437379 PLXNC1O60486 1568 aa19.25■□□□□ 0.67
HDAC11-213ENST00000437379 DUOX2Q9NRD8 1548 aa19.24■□□□□ 0.67
HDAC11-213ENST00000437379 ABCC2Q92887 1545 aa19.23■□□□□ 0.67
HDAC11-213ENST00000437379 ZBTB47Q9UFB7 747 aaPredicted RBP19.23■□□□□ 0.67
HDAC11-213ENST00000437379 PDE3BQ13370 1112 aa19.23■□□□□ 0.67
HDAC11-213ENST00000437379 TRAPPC8Q9Y2L5 1435 aa19.22■□□□□ 0.67
HDAC11-213ENST00000437379 WASHC2CQ9Y4E1 1318 aa19.21■□□□□ 0.67
HDAC11-213ENST00000437379 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.67
HDAC11-213ENST00000437379 AFAP1Q8N556 730 aa19.21■□□□□ 0.67
HDAC11-213ENST00000437379 SHROOM2Q13796 1616 aa19.2■□□□□ 0.66
HDAC11-213ENST00000437379 ADAMTS8Q9UP79 889 aa19.2■□□□□ 0.66
HDAC11-213ENST00000437379 LAMC1P11047 1609 aa19.2■□□□□ 0.66
HDAC11-213ENST00000437379 ATP10AO60312 1499 aa19.2■□□□□ 0.66
HDAC11-213ENST00000437379 MAGI2Q86UL8 1455 aa19.19■□□□□ 0.66
HDAC11-213ENST00000437379 PLCH2O75038 1416 aa19.19■□□□□ 0.66
HDAC11-213ENST00000437379 SKAP1Q86WV1 359 aa19.19■□□□□ 0.66
HDAC11-213ENST00000437379 EIF2AK4Q9P2K8 1649 aaKnown RBP19.19■□□□□ 0.66
HDAC11-213ENST00000437379 BLMP54132 1417 aaPredicted RBP19.18■□□□□ 0.66
HDAC11-213ENST00000437379 NPM2Q86SE8 214 aaKnown RBP19.18■□□□□ 0.66
HDAC11-213ENST00000437379 RTL5Q5HYW3 569 aaPredicted RBP19.17■□□□□ 0.66
HDAC11-213ENST00000437379 WDR7Q9Y4E6 1490 aa19.15■□□□□ 0.66
HDAC11-213ENST00000437379 KNSTRNQ9Y448 316 aa19.15■□□□□ 0.66
HDAC11-213ENST00000437379 CRBNQ96SW2 442 aa19.15■□□□□ 0.66
HDAC11-213ENST00000437379 SPAG9O60271 1321 aaKnown RBP19.14■□□□□ 0.66
HDAC11-213ENST00000437379 C20orf194Q5TEA3 1177 aa19.14■□□□□ 0.65
HDAC11-213ENST00000437379 PPP2R1AP30153 589 aa19.13■□□□□ 0.65
HDAC11-213ENST00000437379 RNF17Q9BXT8 1623 aaKnown RBP19.13■□□□□ 0.65
HDAC11-213ENST00000437379 ABCC1P33527 1531 aa19.13■□□□□ 0.65
HDAC11-213ENST00000437379 ZCCHC11Q5TAX3 1644 aaKnown RBP19.12■□□□□ 0.65
HDAC11-213ENST00000437379 PDE4AP27815 886 aa19.12■□□□□ 0.65
HDAC11-213ENST00000437379 AMER1Q5JTC6 1135 aaPredicted RBP19.12■□□□□ 0.65
HDAC11-213ENST00000437379 TCERG1O14776 1098 aaKnown RBP19.11■□□□□ 0.65
HDAC11-213ENST00000437379 MADDQ8WXG6 1647 aa19.11■□□□□ 0.65
HDAC11-213ENST00000437379 PLEKHH1Q9ULM0 1364 aa19.1■□□□□ 0.65
HDAC11-213ENST00000437379 ZMYM4Q5VZL5 1548 aa19.09■□□□□ 0.65
HDAC11-213ENST00000437379 WDR43Q15061 677 aaKnown RBP eCLIP19.09■□□□□ 0.65
HDAC11-213ENST00000437379 BACH2Q9BYV9 841 aa19.07■□□□□ 0.64
HDAC11-213ENST00000437379 INSRP06213 1382 aa19.07■□□□□ 0.64
HDAC11-213ENST00000437379 CCDC146Q8IYE0 955 aa19.05■□□□□ 0.64
HDAC11-213ENST00000437379 IQGAP1P46940 1657 aa19.05■□□□□ 0.64
HDAC11-213ENST00000437379 TRPM2O94759 1503 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms