RNA–Protein interactions for RNA: ENST00000437366.2

NEFM-203, Transcript of neurofilament medium, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEFM, Length 3,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-203ENST00000437366 ABCC2Q92887 1545 aa15.55■□□□□ 0.08
NEFM-203ENST00000437366 NPM1P06748 294 aaKnown RBP eCLIP15.55■□□□□ 0.08
NEFM-203ENST00000437366 B4GALNT3Q6L9W6 998 aa15.54■□□□□ 0.08
NEFM-203ENST00000437366 TRAPPC8Q9Y2L5 1435 aa15.54■□□□□ 0.08
NEFM-203ENST00000437366 ZBED9Q6R2W3 1325 aa15.53■□□□□ 0.08
NEFM-203ENST00000437366 CDC42BPBQ9Y5S2 1711 aa15.53■□□□□ 0.08
NEFM-203ENST00000437366 DHX29Q7Z478 1369 aaKnown RBP15.52■□□□□ 0.07
NEFM-203ENST00000437366 ARHGEF12Q9NZN5 1544 aa15.52■□□□□ 0.07
NEFM-203ENST00000437366 PLCH2O75038 1416 aa15.51■□□□□ 0.07
NEFM-203ENST00000437366 PREX2Q70Z35 1606 aa15.51■□□□□ 0.07
NEFM-203ENST00000437366 ARHGEF5Q12774 1597 aa15.5■□□□□ 0.07
NEFM-203ENST00000437366 RALGAPBQ86X10 1494 aa15.5■□□□□ 0.07
NEFM-203ENST00000437366 PANK3Q9H999 370 aa15.49■□□□□ 0.07
NEFM-203ENST00000437366 BCORL1Q5H9F3 1711 aa15.48■□□□□ 0.07
NEFM-203ENST00000437366 SCAPERQ9BY12 1400 aa15.48■□□□□ 0.07
NEFM-203ENST00000437366 TMF1P82094 1093 aa15.48■□□□□ 0.07
NEFM-203ENST00000437366 GGT6Q6P531 493 aa15.48■□□□□ 0.07
NEFM-203ENST00000437366 UHRF1BP1Q6BDS2 1440 aa15.47■□□□□ 0.07
NEFM-203ENST00000437366 PNISRQ8TF01 805 aaKnown RBP15.47■□□□□ 0.07
NEFM-203ENST00000437366 ARID4BQ4LE39 1312 aaPredicted RBP15.46■□□□□ 0.07
NEFM-203ENST00000437366 RBM19Q9Y4C8 960 aaKnown RBP15.46■□□□□ 0.07
NEFM-203ENST00000437366 PRAG1Q86YV5 1406 aa15.46■□□□□ 0.07
NEFM-203ENST00000437366 PLA2R1Q13018 1463 aa15.46■□□□□ 0.07
NEFM-203ENST00000437366 MYBBP1AQ9BQG0 1328 aaKnown RBP15.45■□□□□ 0.06
NEFM-203ENST00000437366 KDM5CP41229 1560 aa15.45■□□□□ 0.06
NEFM-203ENST00000437366 KTN1Q86UP2 1357 aaKnown RBP15.44■□□□□ 0.06
NEFM-203ENST00000437366 RALBP1Q15311 655 aa15.44■□□□□ 0.06
NEFM-203ENST00000437366 PPP4R2Q9NY27 417 aa15.44■□□□□ 0.06
NEFM-203ENST00000437366 A2MP01023 1474 aa15.43■□□□□ 0.06
NEFM-203ENST00000437366 DISP3Q9P2K9 1392 aa15.43■□□□□ 0.06
NEFM-203ENST00000437366 ZCCHC11Q5TAX3 1644 aaKnown RBP15.42■□□□□ 0.06
NEFM-203ENST00000437366 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
NEFM-203ENST00000437366 KANK1Q14678 1352 aa15.42■□□□□ 0.06
NEFM-203ENST00000437366 MYO5CQ9NQX4 1742 aa15.42■□□□□ 0.06
NEFM-203ENST00000437366 KDM5DQ9BY66 1539 aa15.42■□□□□ 0.06
NEFM-203ENST00000437366 NUDCQ9Y266 331 aa15.42■□□□□ 0.06
NEFM-203ENST00000437366 SHROOM2Q13796 1616 aa15.41■□□□□ 0.06
NEFM-203ENST00000437366 DUOX2Q9NRD8 1548 aa15.41■□□□□ 0.06
NEFM-203ENST00000437366 NUTM2DQ5VT03 806 aaPredicted RBP15.41■□□□□ 0.06
NEFM-203ENST00000437366 NLRP13Q86W25 1043 aa15.4■□□□□ 0.06
NEFM-203ENST00000437366 KNSTRNQ9Y448 316 aa15.4■□□□□ 0.06
NEFM-203ENST00000437366 FANCAO15360 1455 aa15.4■□□□□ 0.06
NEFM-203ENST00000437366 TESK2Q96S53 571 aa15.4■□□□□ 0.06
NEFM-203ENST00000437366 ERBINQ96RT1 1412 aa15.38■□□□□ 0.05
NEFM-203ENST00000437366 CFAP70Q5T0N1 1121 aa15.38■□□□□ 0.05
NEFM-203ENST00000437366 CCDC136Q96JN2 1154 aa15.38■□□□□ 0.05
NEFM-203ENST00000437366 ADGRL1O94910 1474 aa15.37■□□□□ 0.05
NEFM-203ENST00000437366 WDR7Q9Y4E6 1490 aa15.37■□□□□ 0.05
NEFM-203ENST00000437366 ASXL2Q76L83 1435 aa15.35■□□□□ 0.05
NEFM-203ENST00000437366 RAPGEF3O95398 923 aa15.35■□□□□ 0.05
NEFM-203ENST00000437366 CLASP1Q7Z460 1538 aa15.34■□□□□ 0.05
NEFM-203ENST00000437366 PER1O15534 1290 aaPredicted RBP15.34■□□□□ 0.05
NEFM-203ENST00000437366 CDCA7LQ96GN5 454 aa15.34■□□□□ 0.05
NEFM-203ENST00000437366 ABCC1P33527 1531 aa15.34■□□□□ 0.05
NEFM-203ENST00000437366 BRD4O60885 1362 aaPredicted RBP15.33■□□□□ 0.05
NEFM-203ENST00000437366 UHRF1BP1LA0JNW5 1464 aa15.32■□□□□ 0.04
NEFM-203ENST00000437366 TNNT2P45379 298 aaPredicted RBP15.32■□□□□ 0.04
NEFM-203ENST00000437366 WDR43Q15061 677 aaKnown RBP eCLIP15.32■□□□□ 0.04
NEFM-203ENST00000437366 TRAK1Q9UPV9 953 aa15.31■□□□□ 0.04
NEFM-203ENST00000437366 ADGRF5Q8IZF2 1346 aa15.31■□□□□ 0.04
NEFM-203ENST00000437366 WASHC2CQ9Y4E1 1318 aa15.31■□□□□ 0.04
NEFM-203ENST00000437366 MAST1Q9Y2H9 1570 aa15.31■□□□□ 0.04
NEFM-203ENST00000437366 SAFB2Q14151 953 aaKnown RBP eCLIP15.3■□□□□ 0.04
NEFM-203ENST00000437366 CYB5RLQ6IPT4 315 aa15.3■□□□□ 0.04
NEFM-203ENST00000437366 UNC13BO14795 1591 aa15.3■□□□□ 0.04
NEFM-203ENST00000437366 ERICH6Q7L0X2 663 aa15.3■□□□□ 0.04
NEFM-203ENST00000437366 PLXNC1O60486 1568 aa15.29■□□□□ 0.04
NEFM-203ENST00000437366 TMEM132EQ6IEE7 984 aa15.29■□□□□ 0.04
NEFM-203ENST00000437366 SMG6Q86US8 1419 aaKnown RBP15.29■□□□□ 0.04
NEFM-203ENST00000437366 CDCA8Q53HL2 280 aa15.29■□□□□ 0.04
NEFM-203ENST00000437366 PLIN1O60240 522 aa15.28■□□□□ 0.04
NEFM-203ENST00000437366 RCAN3Q9UKA8 241 aa15.28■□□□□ 0.04
NEFM-203ENST00000437366 ADAMTS8Q9UP79 889 aa15.28■□□□□ 0.04
NEFM-203ENST00000437366 GPRASP1Q5JY77 1395 aa15.28■□□□□ 0.04
NEFM-203ENST00000437366 IQGAP3Q86VI3 1631 aa15.28■□□□□ 0.04
NEFM-203ENST00000437366 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
NEFM-203ENST00000437366 CCDC146Q8IYE0 955 aa15.27■□□□□ 0.04
NEFM-203ENST00000437366 ATP10AO60312 1499 aa15.27■□□□□ 0.03
NEFM-203ENST00000437366 TRPM1Q7Z4N2 1603 aa15.26■□□□□ 0.03
NEFM-203ENST00000437366 RTEL1-TNFRSF6BF6WH68 1400 aa15.26■□□□□ 0.03
NEFM-203ENST00000437366 POLR1AO95602 1720 aaPredicted RBP15.26■□□□□ 0.03
NEFM-203ENST00000437366 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
NEFM-203ENST00000437366 PARD3Q8TEW0 1356 aa15.26■□□□□ 0.03
NEFM-203ENST00000437366 COL17A1Q9UMD9 1497 aaPredicted RBP15.26■□□□□ 0.03
NEFM-203ENST00000437366 UGGT1Q9NYU2 1555 aa15.26■□□□□ 0.03
NEFM-203ENST00000437366 ATP7AQ04656 1500 aa15.25■□□□□ 0.03
NEFM-203ENST00000437366 ZFYVE16Q7Z3T8 1539 aa15.25■□□□□ 0.03
NEFM-203ENST00000437366 EXOC6Q8TAG9 804 aa15.24■□□□□ 0.03
NEFM-203ENST00000437366 PPP2R1AP30153 589 aa15.23■□□□□ 0.03
NEFM-203ENST00000437366 STK26Q9P289 416 aa15.23■□□□□ 0.03
NEFM-203ENST00000437366 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
NEFM-203ENST00000437366 LRPPRCP42704 1394 aaKnown RBP15.22■□□□□ 0.03
NEFM-203ENST00000437366 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
NEFM-203ENST00000437366 NEUROD2Q15784 382 aa15.21■□□□□ 0.03
NEFM-203ENST00000437366 ANP32EQ9BTT0 268 aa15.2■□□□□ 0.02
NEFM-203ENST00000437366 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
NEFM-203ENST00000437366 PRDM15P57071 1507 aaPredicted RBP15.2■□□□□ 0.02
NEFM-203ENST00000437366 SCAF11Q99590 1463 aaKnown RBP15.19■□□□□ 0.02
NEFM-203ENST00000437366 E9PCH4 1651 aa15.19■□□□□ 0.02
NEFM-203ENST00000437366 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms