RNA–Protein interactions for RNA: ENST00000436436.5

R3HDM1-207, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-207ENST00000436436 RABGEF1Q9UJ41 708 aa7.9□□□□□ -1.14
R3HDM1-207ENST00000436436 DPYSL4O14531 572 aa7.89□□□□□ -1.15
R3HDM1-207ENST00000436436 WNT2BQ93097 391 aa7.89□□□□□ -1.15
R3HDM1-207ENST00000436436 ONECUT3O60422 494 aaPredicted RBP7.88□□□□□ -1.15
R3HDM1-207ENST00000436436 PTPN5P54829 565 aa7.87□□□□□ -1.15
R3HDM1-207ENST00000436436 LAPTM4BQ86VI4 370 aa7.87□□□□□ -1.15
R3HDM1-207ENST00000436436 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
R3HDM1-207ENST00000436436 COL9A1P20849 921 aa7.86□□□□□ -1.15
R3HDM1-207ENST00000436436 IFFO2Q5TF58 517 aa7.86□□□□□ -1.15
R3HDM1-207ENST00000436436 PDIA6Q15084 440 aa7.85□□□□□ -1.15
R3HDM1-207ENST00000436436 C6orf132Q5T0Z8 1188 aa7.85□□□□□ -1.15
R3HDM1-207ENST00000436436 PROX2Q3B8N5 592 aa7.84□□□□□ -1.15
R3HDM1-207ENST00000436436 ANKK1Q8NFD2 765 aa7.84□□□□□ -1.15
R3HDM1-207ENST00000436436 ARIH1Q9Y4X5 557 aaPredicted RBP7.84□□□□□ -1.15
R3HDM1-207ENST00000436436 RGS20O76081 388 aa7.82□□□□□ -1.16
R3HDM1-207ENST00000436436 E2F4Q16254 413 aa7.82□□□□□ -1.16
R3HDM1-207ENST00000436436 RTN4Q9NQC3 1192 aaKnown RBP7.82□□□□□ -1.16
R3HDM1-207ENST00000436436 KIAA1468Q9P260 1216 aa7.82□□□□□ -1.16
R3HDM1-207ENST00000436436 DDX12PQ92771 950 aa7.81□□□□□ -1.16
R3HDM1-207ENST00000436436 WDR70Q9NW82 654 aa7.81□□□□□ -1.16
R3HDM1-207ENST00000436436 TRIM6-TRIM34B2RNG4 842 aa7.8□□□□□ -1.16
R3HDM1-207ENST00000436436 EN1Q05925 392 aaPredicted RBP7.8□□□□□ -1.16
R3HDM1-207ENST00000436436 NYAP1Q6ZVC0 841 aa7.8□□□□□ -1.16
R3HDM1-207ENST00000436436 PAXIP1Q6ZW49 1069 aaPredicted RBP7.8□□□□□ -1.16
R3HDM1-207ENST00000436436 SOWAHBA6NEL2 793 aa7.79□□□□□ -1.16
R3HDM1-207ENST00000436436 RBM33Q96EV2 1170 aaKnown RBP7.79□□□□□ -1.16
R3HDM1-207ENST00000436436 NBR1Q14596 966 aa7.78□□□□□ -1.16
R3HDM1-207ENST00000436436 FAM98CQ17RN3 349 aaKnown RBP7.78□□□□□ -1.16
R3HDM1-207ENST00000436436 ZFRQ96KR1 1074 aaKnown RBP7.78□□□□□ -1.16
R3HDM1-207ENST00000436436 CFAP44Q96MT7 982 aa7.78□□□□□ -1.16
R3HDM1-207ENST00000436436 MAP3K7O43318 606 aa7.77□□□□□ -1.17
R3HDM1-207ENST00000436436 CERKQ8TCT0 537 aa7.77□□□□□ -1.17
R3HDM1-207ENST00000436436 PACS2Q86VP3 889 aa7.76□□□□□ -1.17
R3HDM1-207ENST00000436436 A0A0G2JS52 829 aa7.75□□□□□ -1.17
R3HDM1-207ENST00000436436 ITGBL1O95965 494 aaPredicted RBP7.74□□□□□ -1.17
R3HDM1-207ENST00000436436 BCAMP50895 628 aa7.74□□□□□ -1.17
R3HDM1-207ENST00000436436 SEPT9Q9UHD8 586 aaPredicted RBP7.74□□□□□ -1.17
R3HDM1-207ENST00000436436 TSR1Q2NL82 804 aaKnown RBP7.73□□□□□ -1.17
R3HDM1-207ENST00000436436 LRCH3Q96II8 777 aa7.72□□□□□ -1.17
R3HDM1-207ENST00000436436 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.72□□□□□ -1.17
R3HDM1-207ENST00000436436 TSR3Q9UJK0 312 aaKnown RBP7.72□□□□□ -1.17
R3HDM1-207ENST00000436436 PRSS12P56730 875 aa7.71□□□□□ -1.18
R3HDM1-207ENST00000436436 CDCA7LQ96GN5 454 aa7.71□□□□□ -1.18
R3HDM1-207ENST00000436436 TSKSQ9UJT2 592 aa7.71□□□□□ -1.18
R3HDM1-207ENST00000436436 GRXCR2A6NFK2 248 aa7.7□□□□□ -1.18
R3HDM1-207ENST00000436436 WBP1LQ9NX94 342 aa7.7□□□□□ -1.18
R3HDM1-207ENST00000436436 RBM27Q9P2N5 1060 aaKnown RBP7.7□□□□□ -1.18
R3HDM1-207ENST00000436436 NBPF26B4DH59 902 aa7.68□□□□□ -1.18
R3HDM1-207ENST00000436436 OSBPP22059 807 aa7.68□□□□□ -1.18
R3HDM1-207ENST00000436436 KCNC4Q03721 635 aa7.67□□□□□ -1.18
R3HDM1-207ENST00000436436 HPS5Q9UPZ3 1129 aa7.67□□□□□ -1.18
R3HDM1-207ENST00000436436 PRIM1P49642 420 aaKnown RBP7.66□□□□□ -1.18
R3HDM1-207ENST00000436436 PPP4CP60510 307 aa7.65□□□□□ -1.18
R3HDM1-207ENST00000436436 ARHGEF1Q92888 912 aaKnown RBP7.65□□□□□ -1.18
R3HDM1-207ENST00000436436 TATDN2Q93075 761 aa7.65□□□□□ -1.18
R3HDM1-207ENST00000436436 HDGFP51858 240 aaKnown RBP7.64□□□□□ -1.19
R3HDM1-207ENST00000436436 FAM198AQ9UFP1 575 aa7.64□□□□□ -1.19
R3HDM1-207ENST00000436436 PNMA3Q9UL41 463 aa7.64□□□□□ -1.19
R3HDM1-207ENST00000436436 NECTIN2Q92692 538 aa7.63□□□□□ -1.19
R3HDM1-207ENST00000436436 SAMD7Q7Z3H4 446 aa7.62□□□□□ -1.19
R3HDM1-207ENST00000436436 TTC13Q8NBP0 860 aa7.62□□□□□ -1.19
R3HDM1-207ENST00000436436 IRX2Q9BZI1 471 aaPredicted RBP7.62□□□□□ -1.19
R3HDM1-207ENST00000436436 CDHR5Q9HBB8 845 aa7.62□□□□□ -1.19
R3HDM1-207ENST00000436436 SMAPO00193 183 aa7.61□□□□□ -1.19
R3HDM1-207ENST00000436436 NUDT18Q6ZVK8 323 aa7.6□□□□□ -1.19
R3HDM1-207ENST00000436436 TSHZ2Q9NRE2 1034 aa7.6□□□□□ -1.19
R3HDM1-207ENST00000436436 NPDC1Q9NQX5 325 aaPredicted RBP7.59□□□□□ -1.19
R3HDM1-207ENST00000436436 C3orf80F5H4A9 247 aa7.57□□□□□ -1.2
R3HDM1-207ENST00000436436 SLC4A3P48751 1232 aa7.57□□□□□ -1.2
R3HDM1-207ENST00000436436 TJAP1Q5JTD0 557 aa7.57□□□□□ -1.2
R3HDM1-207ENST00000436436 PADI6Q6TGC4 694 aa7.57□□□□□ -1.2
R3HDM1-207ENST00000436436 P3H3Q8IVL6 736 aa7.57□□□□□ -1.2
R3HDM1-207ENST00000436436 SLF2Q8IX21 1173 aa7.57□□□□□ -1.2
R3HDM1-207ENST00000436436 IL21Q9HBE4 155 aa7.57□□□□□ -1.2
R3HDM1-207ENST00000436436 KCNV2Q8TDN2 545 aa7.56□□□□□ -1.2
R3HDM1-207ENST00000436436 EYA1Q99502 592 aa7.54□□□□□ -1.2
R3HDM1-207ENST00000436436 MTRQ99707 1265 aa7.54□□□□□ -1.2
R3HDM1-207ENST00000436436 RNF40O75150 1001 aa7.53□□□□□ -1.2
R3HDM1-207ENST00000436436 MLLT3P42568 568 aaPredicted RBP7.53□□□□□ -1.2
R3HDM1-207ENST00000436436 SWT1Q5T5J6 900 aaKnown RBP7.53□□□□□ -1.2
R3HDM1-207ENST00000436436 PRR14Q9BWN1 585 aa7.53□□□□□ -1.2
R3HDM1-207ENST00000436436 PTGDRQ13258 359 aa7.52□□□□□ -1.21
R3HDM1-207ENST00000436436 APLP1P51693 650 aa7.51□□□□□ -1.21
R3HDM1-207ENST00000436436 LAPTM4AQ15012 233 aa7.51□□□□□ -1.21
R3HDM1-207ENST00000436436 RBM46Q8TBY0 533 aaKnown RBP7.5□□□□□ -1.21
R3HDM1-207ENST00000436436 DNAJB2P25686 324 aa7.49□□□□□ -1.21
R3HDM1-207ENST00000436436 GGCXP38435 758 aa7.48□□□□□ -1.21
R3HDM1-207ENST00000436436 ADGRG1Q9Y653 693 aa7.48□□□□□ -1.21
R3HDM1-207ENST00000436436 NUTM2FA1L443 756 aa7.47□□□□□ -1.21
R3HDM1-207ENST00000436436 PPP1R18Q6NYC8 613 aa7.47□□□□□ -1.21
R3HDM1-207ENST00000436436 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.47□□□□□ -1.21
R3HDM1-207ENST00000436436 V9GY48 417 aaPredicted RBP7.47□□□□□ -1.21
R3HDM1-207ENST00000436436 FCHSD2O94868 740 aa7.46□□□□□ -1.22
R3HDM1-207ENST00000436436 ZNF516Q92618 1163 aa7.46□□□□□ -1.22
R3HDM1-207ENST00000436436 TMEM134Q9H6X4 195 aa7.46□□□□□ -1.22
R3HDM1-207ENST00000436436 TMUB1Q9BVT8 246 aa7.45□□□□□ -1.22
R3HDM1-207ENST00000436436 PRKD2Q9BZL6 878 aa7.45□□□□□ -1.22
R3HDM1-207ENST00000436436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.44□□□□□ -1.22
R3HDM1-207ENST00000436436 ZPR1O75312 459 aa7.44□□□□□ -1.22
R3HDM1-207ENST00000436436 SMYD5Q6GMV2 418 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 779.8 ms