RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 SND1Q7KZF4 910 aaKnown RBP eCLIP8.63□□□□□ -1.03
VRK2-206ENST00000435505 NUTM2FA1L443 756 aa8.62□□□□□ -1.03
VRK2-206ENST00000435505 RFX1P22670 979 aa8.62□□□□□ -1.03
VRK2-206ENST00000435505 CALR3Q96L12 384 aaKnown RBP8.62□□□□□ -1.03
VRK2-206ENST00000435505 DEKP35659 375 aaKnown RBP8.62□□□□□ -1.03
VRK2-206ENST00000435505 EMILIN3Q9NT22 766 aa8.62□□□□□ -1.03
VRK2-206ENST00000435505 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
VRK2-206ENST00000435505 SMARCA5O60264 1052 aaPredicted RBP8.61□□□□□ -1.03
VRK2-206ENST00000435505 PSEN1P49768 467 aa8.61□□□□□ -1.03
VRK2-206ENST00000435505 GDPD2Q9HCC8 539 aa8.61□□□□□ -1.03
VRK2-206ENST00000435505 GLMNQ92990 594 aa8.61□□□□□ -1.03
VRK2-206ENST00000435505 ZNF467Q7Z7K2 595 aaPredicted RBP8.6□□□□□ -1.03
VRK2-206ENST00000435505 ZCCHC6Q5VYS8 1495 aaKnown RBP8.6□□□□□ -1.03
VRK2-206ENST00000435505 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
VRK2-206ENST00000435505 NLRP6P59044 892 aa8.59□□□□□ -1.03
VRK2-206ENST00000435505 ATP1B4Q9UN42 357 aaPredicted RBP8.59□□□□□ -1.03
VRK2-206ENST00000435505 MS4A4AQ96JQ5 239 aa8.59□□□□□ -1.03
VRK2-206ENST00000435505 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
VRK2-206ENST00000435505 GNPATO15228 680 aa8.58□□□□□ -1.04
VRK2-206ENST00000435505 CABP2Q9NPB3 220 aa8.58□□□□□ -1.04
VRK2-206ENST00000435505 PDIA6Q15084 440 aa8.56□□□□□ -1.04
VRK2-206ENST00000435505 GRXCR2A6NFK2 248 aa8.55□□□□□ -1.04
VRK2-206ENST00000435505 PATL2C9JE40 543 aaKnown RBP8.55□□□□□ -1.04
VRK2-206ENST00000435505 PBXIP1Q96AQ6 731 aa8.55□□□□□ -1.04
VRK2-206ENST00000435505 MRRFQ96E11 262 aaKnown RBP8.55□□□□□ -1.04
VRK2-206ENST00000435505 ERICH6BQ5W0A0 696 aa8.55□□□□□ -1.04
VRK2-206ENST00000435505 TXNDC2Q86VQ3 553 aa8.55□□□□□ -1.04
VRK2-206ENST00000435505 RBM47A0AV96 593 aaKnown RBP8.54□□□□□ -1.04
VRK2-206ENST00000435505 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
VRK2-206ENST00000435505 ADAMTS19Q8TE59 1207 aa8.53□□□□□ -1.04
VRK2-206ENST00000435505 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.53□□□□□ -1.04
VRK2-206ENST00000435505 TBC1D12O60347 775 aa8.53□□□□□ -1.04
VRK2-206ENST00000435505 TSPYL2Q9H2G4 693 aaPredicted RBP8.53□□□□□ -1.04
VRK2-206ENST00000435505 DSG3P32926 999 aa8.52□□□□□ -1.05
VRK2-206ENST00000435505 MTMR14Q8NCE2 650 aa8.52□□□□□ -1.05
VRK2-206ENST00000435505 PPP1R15BQ5SWA1 713 aa8.52□□□□□ -1.05
VRK2-206ENST00000435505 USTQ9Y2C2 406 aa8.52□□□□□ -1.05
VRK2-206ENST00000435505 FANCIQ9NVI1 1328 aa8.51□□□□□ -1.05
VRK2-206ENST00000435505 ABL2P42684 1182 aa8.51□□□□□ -1.05
VRK2-206ENST00000435505 CFAP70Q5T0N1 1121 aa8.51□□□□□ -1.05
VRK2-206ENST00000435505 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
VRK2-206ENST00000435505 PHOX2BQ99453 314 aa8.5□□□□□ -1.05
VRK2-206ENST00000435505 CSB-PGBD3P0DP91 1061 aa8.5□□□□□ -1.05
VRK2-206ENST00000435505 PDE4CQ08493 712 aa8.5□□□□□ -1.05
VRK2-206ENST00000435505 ITGAEP38570 1179 aa8.49□□□□□ -1.05
VRK2-206ENST00000435505 RFC5P40937 340 aa8.49□□□□□ -1.05
VRK2-206ENST00000435505 CERS3Q8IU89 383 aa8.49□□□□□ -1.05
VRK2-206ENST00000435505 HIC1Q14526 733 aa8.49□□□□□ -1.05
VRK2-206ENST00000435505 PKNOX2Q96KN3 472 aa8.49□□□□□ -1.05
VRK2-206ENST00000435505 RNF39Q9H2S5 420 aa8.49□□□□□ -1.05
VRK2-206ENST00000435505 TBC1D2BQ9UPU7 963 aa8.49□□□□□ -1.05
VRK2-206ENST00000435505 BEGAINQ9BUH8 593 aa8.48□□□□□ -1.05
VRK2-206ENST00000435505 TMUB1Q9BVT8 246 aa8.48□□□□□ -1.05
VRK2-206ENST00000435505 SOX12O15370 315 aa8.48□□□□□ -1.05
VRK2-206ENST00000435505 KDM4AO75164 1064 aa8.48□□□□□ -1.05
VRK2-206ENST00000435505 PRIM1P49642 420 aaKnown RBP8.48□□□□□ -1.05
VRK2-206ENST00000435505 SPATA32Q96LK8 384 aa8.48□□□□□ -1.05
VRK2-206ENST00000435505 TMEM88BA6NKF7 163 aa8.47□□□□□ -1.05
VRK2-206ENST00000435505 OSBPP22059 807 aa8.47□□□□□ -1.05
VRK2-206ENST00000435505 MDM2Q00987 491 aaPredicted RBP8.47□□□□□ -1.05
VRK2-206ENST00000435505 CDCA8Q53HL2 280 aa8.46□□□□□ -1.06
VRK2-206ENST00000435505 MYSM1Q5VVJ2 828 aa8.46□□□□□ -1.06
VRK2-206ENST00000435505 NLRP7Q8WX94 980 aa8.46□□□□□ -1.06
VRK2-206ENST00000435505 VRTNQ9H8Y1 702 aa8.46□□□□□ -1.06
VRK2-206ENST00000435505 BRPF3Q9ULD4 1205 aa8.46□□□□□ -1.06
VRK2-206ENST00000435505 CLEC11AQ9Y240 323 aa8.46□□□□□ -1.06
VRK2-206ENST00000435505 CADPSQ9ULU8 1353 aa8.46□□□□□ -1.06
VRK2-206ENST00000435505 SPDYE16A6NNV3 312 aaPredicted RBP8.45□□□□□ -1.06
VRK2-206ENST00000435505 SSTR3P32745 418 aaPredicted RBP8.45□□□□□ -1.06
VRK2-206ENST00000435505 HDGFL1Q5TGJ6 251 aa8.45□□□□□ -1.06
VRK2-206ENST00000435505 PPP1R1BQ9UD71 204 aaPredicted RBP8.45□□□□□ -1.06
VRK2-206ENST00000435505 ZNF16P17020 682 aaPredicted RBP8.44□□□□□ -1.06
VRK2-206ENST00000435505 PRR29P0C7W0 189 aa8.44□□□□□ -1.06
VRK2-206ENST00000435505 DNAJC14Q6Y2X3 702 aaPredicted RBP8.44□□□□□ -1.06
VRK2-206ENST00000435505 TCF3P15923 654 aa8.43□□□□□ -1.06
VRK2-206ENST00000435505 SIRT1Q96EB6 747 aa8.43□□□□□ -1.06
VRK2-206ENST00000435505 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.43□□□□□ -1.062e-6■■■■□ 23.5
VRK2-206ENST00000435505 FCHSD2O94868 740 aa8.43□□□□□ -1.06
VRK2-206ENST00000435505 IFNL1Q8IU54 200 aa8.43□□□□□ -1.06
VRK2-206ENST00000435505 ARID4BQ4LE39 1312 aaPredicted RBP8.42□□□□□ -1.06
VRK2-206ENST00000435505 DSG2Q14126 1118 aa8.42□□□□□ -1.06
VRK2-206ENST00000435505 DRC1Q96MC2 740 aa8.42□□□□□ -1.06
VRK2-206ENST00000435505 BANK1Q8NDB2 785 aa8.41□□□□□ -1.06
VRK2-206ENST00000435505 KCNH8Q96L42 1107 aa8.41□□□□□ -1.06
VRK2-206ENST00000435505 ZNF662Q6ZS27 426 aa8.4□□□□□ -1.06
VRK2-206ENST00000435505 SREK1Q8WXA9 508 aaKnown RBP8.4□□□□□ -1.06
VRK2-206ENST00000435505 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
VRK2-206ENST00000435505 FARP1Q9Y4F1 1045 aaPredicted RBP8.4□□□□□ -1.06
VRK2-206ENST00000435505 PTGDRQ13258 359 aa8.4□□□□□ -1.07
VRK2-206ENST00000435505 ZNF579Q8NAF0 562 aaKnown RBP8.4□□□□□ -1.07
VRK2-206ENST00000435505 GPCPD1Q9NPB8 672 aa8.4□□□□□ -1.07
VRK2-206ENST00000435505 GPHNQ9NQX3 736 aaPredicted RBP8.4□□□□□ -1.07
VRK2-206ENST00000435505 NEFLP07196 543 aa8.39□□□□□ -1.07
VRK2-206ENST00000435505 CLK2P49760 499 aaKnown RBP8.39□□□□□ -1.07
VRK2-206ENST00000435505 TMED8Q6PL24 325 aaPredicted RBP8.39□□□□□ -1.07
VRK2-206ENST00000435505 DDX12PQ92771 950 aa8.39□□□□□ -1.07
VRK2-206ENST00000435505 PPP1R12CQ9BZL4 782 aa8.39□□□□□ -1.07
VRK2-206ENST00000435505 LIMD1Q9UGP4 676 aa8.39□□□□□ -1.07
VRK2-206ENST00000435505 GIMAP6Q6P9H5 292 aa8.39□□□□□ -1.07
VRK2-206ENST00000435505 GNEQ9Y223 722 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms