RNA–Protein interactions for RNA: ENST00000434452.5

DSC3-202, Transcript of desmocollin 3, humanhuman

TSL 5 BASIC

Gene DSC3, Length 6,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-202ENST00000434452 B4GALNT3Q6L9W6 998 aa11.5□□□□□ -0.57
DSC3-202ENST00000434452 TTC5Q8N0Z6 440 aa11.5□□□□□ -0.57
DSC3-202ENST00000434452 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
DSC3-202ENST00000434452 FYB1O15117 783 aa11.5□□□□□ -0.57
DSC3-202ENST00000434452 WASHC2AQ641Q2 1341 aa11.49□□□□□ -0.57
DSC3-202ENST00000434452 CCDC47Q96A33 483 aaKnown RBP11.49□□□□□ -0.57
DSC3-202ENST00000434452 IPO8O15397 1037 aaKnown RBP11.48□□□□□ -0.57
DSC3-202ENST00000434452 NUTM2DQ5VT03 806 aaPredicted RBP11.48□□□□□ -0.57
DSC3-202ENST00000434452 U2AF1L5P0DN76 240 aaPredicted RBP11.48□□□□□ -0.57
DSC3-202ENST00000434452 U2AF1Q01081 240 aaKnown RBP eCLIP11.48□□□□□ -0.57
DSC3-202ENST00000434452 ITPRIPQ8IWB1 547 aa11.47□□□□□ -0.57
DSC3-202ENST00000434452 TMF1P82094 1093 aa11.47□□□□□ -0.57
DSC3-202ENST00000434452 CALD1Q05682 793 aaKnown RBP11.47□□□□□ -0.57
DSC3-202ENST00000434452 WDHD1O75717 1129 aaPredicted RBP11.47□□□□□ -0.57
DSC3-202ENST00000434452 CALRP27797 417 aaKnown RBP11.47□□□□□ -0.57
DSC3-202ENST00000434452 CHMP4BP1P59074 171 aa11.47□□□□□ -0.57
DSC3-202ENST00000434452 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.47□□□□□ -0.57
DSC3-202ENST00000434452 TPM1P09493 284 aa11.46□□□□□ -0.57
DSC3-202ENST00000434452 H3BQV1 296 aa11.46□□□□□ -0.57
DSC3-202ENST00000434452 IFFO2Q5TF58 517 aa11.46□□□□□ -0.57
DSC3-202ENST00000434452 KIF3AQ9Y496 699 aa11.45□□□□□ -0.58
DSC3-202ENST00000434452 HSP90AB2PQ58FF8 381 aa11.45□□□□□ -0.58
DSC3-202ENST00000434452 NUTM2BA6NNL0 878 aaPredicted RBP11.44□□□□□ -0.58
DSC3-202ENST00000434452 NUTM2EB1AL46 878 aaPredicted RBP11.44□□□□□ -0.58
DSC3-202ENST00000434452 NUTM2AQ8IVF1 878 aaPredicted RBP11.44□□□□□ -0.58
DSC3-202ENST00000434452 CCDC27Q2M243 656 aa11.44□□□□□ -0.58
DSC3-202ENST00000434452 CCDC70Q6NSX1 233 aa11.44□□□□□ -0.58
DSC3-202ENST00000434452 SETQ01105 290 aaPredicted RBP11.44□□□□□ -0.58
DSC3-202ENST00000434452 FAM184AQ8NB25 1140 aa11.44□□□□□ -0.58
DSC3-202ENST00000434452 DCAF11Q8TEB1 546 aa11.44□□□□□ -0.58
DSC3-202ENST00000434452 NAP1L1P55209 391 aaKnown RBP11.43□□□□□ -0.58
DSC3-202ENST00000434452 TRIM29Q14134 588 aa11.43□□□□□ -0.58
DSC3-202ENST00000434452 IPO7O95373 1038 aaKnown RBP11.43□□□□□ -0.58
DSC3-202ENST00000434452 FAM177BA6PVY3 158 aa11.43□□□□□ -0.58
DSC3-202ENST00000434452 GRM1Q13255 1194 aa11.43□□□□□ -0.58
DSC3-202ENST00000434452 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.43□□□□□ -0.58
DSC3-202ENST00000434452 KIF16BQ96L93 1317 aa11.43□□□□□ -0.58
DSC3-202ENST00000434452 HMMRO75330 724 aa11.42□□□□□ -0.58
DSC3-202ENST00000434452 MCTP1Q6DN14 999 aa11.42□□□□□ -0.58
DSC3-202ENST00000434452 SYAP1Q96A49 352 aaPredicted RBP11.42□□□□□ -0.58
DSC3-202ENST00000434452 NEBLO76041 1014 aa11.42□□□□□ -0.58
DSC3-202ENST00000434452 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
DSC3-202ENST00000434452 MPHOSPH10O00566 681 aaKnown RBP11.41□□□□□ -0.58
DSC3-202ENST00000434452 CPLX2Q6PUV4 134 aaKnown RBP11.41□□□□□ -0.58
DSC3-202ENST00000434452 NFXL1Q6ZNB6 911 aa11.41□□□□□ -0.58
DSC3-202ENST00000434452 TEFQ10587 303 aa11.4□□□□□ -0.58
DSC3-202ENST00000434452 FOXD4L5Q5VV16 416 aaPredicted RBP11.4□□□□□ -0.58
DSC3-202ENST00000434452 FOXD4L4Q8WXT5 416 aaPredicted RBP11.4□□□□□ -0.58
DSC3-202ENST00000434452 EPS15P42566 896 aa11.4□□□□□ -0.58
DSC3-202ENST00000434452 ERICH2A1L162 156 aa11.4□□□□□ -0.58
DSC3-202ENST00000434452 CA8P35219 290 aa11.4□□□□□ -0.58
DSC3-202ENST00000434452 CSPP1Q1MSJ5 1256 aa11.4□□□□□ -0.58
DSC3-202ENST00000434452 NEXNQ0ZGT2 675 aa11.4□□□□□ -0.59
DSC3-202ENST00000434452 SMC4Q9NTJ3 1288 aa11.4□□□□□ -0.59
DSC3-202ENST00000434452 ATP2B2Q01814 1243 aa11.39□□□□□ -0.59
DSC3-202ENST00000434452 ATF3P18847 181 aa11.39□□□□□ -0.59
DSC3-202ENST00000434452 RBM5P52756 815 aaKnown RBP eCLIP11.39□□□□□ -0.59
DSC3-202ENST00000434452 LRRFIP1Q32MZ4 808 aaKnown RBP11.39□□□□□ -0.59
DSC3-202ENST00000434452 EIF2S2P20042 333 aaKnown RBP11.38□□□□□ -0.59
DSC3-202ENST00000434452 RDXP35241 583 aaKnown RBP11.38□□□□□ -0.59
DSC3-202ENST00000434452 ANKRD20A12PQ8NF67 263 aa11.38□□□□□ -0.59
DSC3-202ENST00000434452 TTLL12Q14166 644 aaPredicted RBP11.38□□□□□ -0.59
DSC3-202ENST00000434452 OFD1O75665 1012 aa11.38□□□□□ -0.59
DSC3-202ENST00000434452 PSME1Q06323 249 aa11.38□□□□□ -0.59
DSC3-202ENST00000434452 GZF1Q9H116 711 aaPredicted RBP11.38□□□□□ -0.59
DSC3-202ENST00000434452 HOMER1Q86YM7 354 aa11.38□□□□□ -0.59
DSC3-202ENST00000434452 PLIN1O60240 522 aa11.37□□□□□ -0.59
DSC3-202ENST00000434452 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
DSC3-202ENST00000434452 CPLX1O14810 134 aa11.36□□□□□ -0.59
DSC3-202ENST00000434452 TRDNQ13061 729 aa11.36□□□□□ -0.59
DSC3-202ENST00000434452 RILPL2Q969X0 211 aa11.36□□□□□ -0.59
DSC3-202ENST00000434452 GBP4Q96PP9 640 aa11.36□□□□□ -0.59
DSC3-202ENST00000434452 RSF1Q96T23 1441 aaPredicted RBP11.35□□□□□ -0.59
DSC3-202ENST00000434452 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
DSC3-202ENST00000434452 ANKRD62A6NC57 917 aa11.35□□□□□ -0.59
DSC3-202ENST00000434452 C9orf78Q9NZ63 289 aaPredicted RBP11.34□□□□□ -0.59
DSC3-202ENST00000434452 SLKQ9H2G2 1235 aaPredicted RBP11.34□□□□□ -0.59
DSC3-202ENST00000434452 PDCL3Q9H2J4 239 aa11.34□□□□□ -0.59
DSC3-202ENST00000434452 TERF2IPQ9NYB0 399 aa11.34□□□□□ -0.59
DSC3-202ENST00000434452 BECN2A8MW95 431 aa11.34□□□□□ -0.59
DSC3-202ENST00000434452 NEFHP12036 1026 aa11.33□□□□□ -0.6
DSC3-202ENST00000434452 TCERG1O14776 1098 aaKnown RBP11.33□□□□□ -0.6
DSC3-202ENST00000434452 FOXD4L6Q3SYB3 417 aaPredicted RBP11.33□□□□□ -0.6
DSC3-202ENST00000434452 FOXD4L3Q6VB84 417 aaPredicted RBP11.33□□□□□ -0.6
DSC3-202ENST00000434452 CBX1P83916 185 aa11.33□□□□□ -0.6
DSC3-202ENST00000434452 RFX1P22670 979 aa11.33□□□□□ -0.6
DSC3-202ENST00000434452 WDR78Q5VTH9 848 aa11.33□□□□□ -0.6
DSC3-202ENST00000434452 GOLGA6L19H0YKK7 550 aa11.33□□□□□ -0.6
DSC3-202ENST00000434452 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
DSC3-202ENST00000434452 CYB5RLQ6IPT4 315 aa11.32□□□□□ -0.6
DSC3-202ENST00000434452 SCLT1Q96NL6 688 aa11.32□□□□□ -0.6
DSC3-202ENST00000434452 KDM4AO75164 1064 aa11.32□□□□□ -0.6
DSC3-202ENST00000434452 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
DSC3-202ENST00000434452 MATR3P43243 847 aaKnown RBP eCLIP11.32□□□□□ -0.6
DSC3-202ENST00000434452 MFAP1P55081 439 aaKnown RBP11.32□□□□□ -0.6
DSC3-202ENST00000434452 SYCP1Q15431 976 aa11.32□□□□□ -0.6
DSC3-202ENST00000434452 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
DSC3-202ENST00000434452 C16orf71Q8IYS4 520 aaPredicted RBP11.31□□□□□ -0.6
DSC3-202ENST00000434452 CHMP4CQ96CF2 233 aa11.31□□□□□ -0.6
DSC3-202ENST00000434452 SKIDA1Q1XH10 827 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms