RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NBR1Q14596 966 aa20.95■□□□□ 0.94
SCARF1-203ENST00000434376 SCAPERQ9BY12 1400 aa20.94■□□□□ 0.94
SCARF1-203ENST00000434376 MBD5Q9P267 1494 aa20.94■□□□□ 0.94
SCARF1-203ENST00000434376 RSPH4AQ5TD94 716 aa20.92■□□□□ 0.94
SCARF1-203ENST00000434376 CHD1O14646 1710 aa20.92■□□□□ 0.94
SCARF1-203ENST00000434376 SPATA31E1Q6ZUB1 1445 aa20.91■□□□□ 0.94
SCARF1-203ENST00000434376 CYB5RLQ6IPT4 315 aa20.91■□□□□ 0.94
SCARF1-203ENST00000434376 CDCA7LQ96GN5 454 aa20.91■□□□□ 0.94
SCARF1-203ENST00000434376 RAPGEF3O95398 923 aa20.91■□□□□ 0.94
SCARF1-203ENST00000434376 CDC42BPAQ5VT25 1732 aa20.91■□□□□ 0.94
SCARF1-203ENST00000434376 CFAP70Q5T0N1 1121 aa20.9■□□□□ 0.94
SCARF1-203ENST00000434376 ITSN2Q9NZM3 1697 aa20.89■□□□□ 0.94
SCARF1-203ENST00000434376 PLIN1O60240 522 aa20.89■□□□□ 0.93
SCARF1-203ENST00000434376 CCDC136Q96JN2 1154 aa20.88■□□□□ 0.93
SCARF1-203ENST00000434376 TTC37Q6PGP7 1564 aa20.87■□□□□ 0.93
SCARF1-203ENST00000434376 TMEM132EQ6IEE7 984 aa20.87■□□□□ 0.93
SCARF1-203ENST00000434376 PNISRQ8TF01 805 aaKnown RBP20.87■□□□□ 0.93
SCARF1-203ENST00000434376 TMF1P82094 1093 aa20.86■□□□□ 0.93
SCARF1-203ENST00000434376 TRAK1Q9UPV9 953 aa20.86■□□□□ 0.93
SCARF1-203ENST00000434376 ZBED9Q6R2W3 1325 aa20.86■□□□□ 0.93
SCARF1-203ENST00000434376 DHX29Q7Z478 1369 aaKnown RBP20.86■□□□□ 0.93
SCARF1-203ENST00000434376 SAMD9LQ8IVG5 1584 aa20.86■□□□□ 0.93
SCARF1-203ENST00000434376 MLECQ14165 292 aa20.86■□□□□ 0.93
SCARF1-203ENST00000434376 CCDC146Q8IYE0 955 aa20.86■□□□□ 0.93
SCARF1-203ENST00000434376 ARHGEF12Q9NZN5 1544 aa20.85■□□□□ 0.93
SCARF1-203ENST00000434376 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
SCARF1-203ENST00000434376 NEUROD2Q15784 382 aa20.84■□□□□ 0.93
SCARF1-203ENST00000434376 FAM135AQ9P2D6 1515 aa20.84■□□□□ 0.93
SCARF1-203ENST00000434376 KNSTRNQ9Y448 316 aa20.84■□□□□ 0.93
SCARF1-203ENST00000434376 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.84■□□□□ 0.93
SCARF1-203ENST00000434376 ADGRL2O95490 1459 aa20.83■□□□□ 0.93
SCARF1-203ENST00000434376 STK26Q9P289 416 aa20.83■□□□□ 0.92
SCARF1-203ENST00000434376 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
SCARF1-203ENST00000434376 SKAP1Q86WV1 359 aa20.81■□□□□ 0.92
SCARF1-203ENST00000434376 PPP4R2Q9NY27 417 aa20.81■□□□□ 0.92
SCARF1-203ENST00000434376 NPM2Q86SE8 214 aaKnown RBP20.8■□□□□ 0.92
SCARF1-203ENST00000434376 BCORL1Q5H9F3 1711 aa20.8■□□□□ 0.92
SCARF1-203ENST00000434376 KTN1Q86UP2 1357 aaKnown RBP20.79■□□□□ 0.92
SCARF1-203ENST00000434376 NUDCQ9Y266 331 aa20.78■□□□□ 0.92
SCARF1-203ENST00000434376 MYBBP1AQ9BQG0 1328 aaKnown RBP20.78■□□□□ 0.92
SCARF1-203ENST00000434376 DEKP35659 375 aaKnown RBP20.78■□□□□ 0.92
SCARF1-203ENST00000434376 PLA2R1Q13018 1463 aa20.77■□□□□ 0.92
SCARF1-203ENST00000434376 TESK2Q96S53 571 aa20.76■□□□□ 0.91
SCARF1-203ENST00000434376 ADGRF5Q8IZF2 1346 aa20.76■□□□□ 0.91
SCARF1-203ENST00000434376 NLRP13Q86W25 1043 aa20.75■□□□□ 0.91
SCARF1-203ENST00000434376 WDR43Q15061 677 aaKnown RBP eCLIP20.75■□□□□ 0.91
SCARF1-203ENST00000434376 CFAP65Q6ZU64 1925 aaKnown RBP20.75■□□□□ 0.91
SCARF1-203ENST00000434376 PLCH2O75038 1416 aa20.74■□□□□ 0.91
SCARF1-203ENST00000434376 WASHC2CQ9Y4E1 1318 aa20.74■□□□□ 0.91
SCARF1-203ENST00000434376 CDC42BPBQ9Y5S2 1711 aa20.74■□□□□ 0.91
SCARF1-203ENST00000434376 EXOC6Q8TAG9 804 aa20.73■□□□□ 0.91
SCARF1-203ENST00000434376 ABCC2Q92887 1545 aa20.73■□□□□ 0.91
SCARF1-203ENST00000434376 ADAMTS8Q9UP79 889 aa20.73■□□□□ 0.91
SCARF1-203ENST00000434376 A2MP01023 1474 aa20.72■□□□□ 0.91
SCARF1-203ENST00000434376 FANCIQ9NVI1 1328 aa20.72■□□□□ 0.91
SCARF1-203ENST00000434376 RALBP1Q15311 655 aa20.72■□□□□ 0.91
SCARF1-203ENST00000434376 ADGBQ8N7X0 1667 aa20.72■□□□□ 0.91
SCARF1-203ENST00000434376 PRAG1Q86YV5 1406 aa20.72■□□□□ 0.91
SCARF1-203ENST00000434376 KANK1Q14678 1352 aa20.7■□□□□ 0.9
SCARF1-203ENST00000434376 RALGAPBQ86X10 1494 aa20.69■□□□□ 0.9
SCARF1-203ENST00000434376 FANCAO15360 1455 aa20.68■□□□□ 0.9
SCARF1-203ENST00000434376 SHANK2Q9UPX8 1470 aa20.68■□□□□ 0.9
SCARF1-203ENST00000434376 STAG3Q9UJ98 1225 aa20.68■□□□□ 0.9
SCARF1-203ENST00000434376 RRP7AQ9Y3A4 280 aaKnown RBP20.68■□□□□ 0.9
SCARF1-203ENST00000434376 PER1O15534 1290 aaPredicted RBP20.67■□□□□ 0.9
SCARF1-203ENST00000434376 RCAN3Q9UKA8 241 aa20.67■□□□□ 0.9
SCARF1-203ENST00000434376 ADCY10Q96PN6 1610 aa20.66■□□□□ 0.9
SCARF1-203ENST00000434376 ERBINQ96RT1 1412 aa20.64■□□□□ 0.9
SCARF1-203ENST00000434376 SLC12A5Q9H2X9 1139 aa20.64■□□□□ 0.89
SCARF1-203ENST00000434376 ADGRL1O94910 1474 aa20.64■□□□□ 0.89
SCARF1-203ENST00000434376 ASXL2Q76L83 1435 aa20.64■□□□□ 0.89
SCARF1-203ENST00000434376 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
SCARF1-203ENST00000434376 CROCC2H7BZ55 1655 aa20.63■□□□□ 0.89
SCARF1-203ENST00000434376 KDM5CP41229 1560 aa20.62■□□□□ 0.89
SCARF1-203ENST00000434376 PAK3O75914 559 aaPredicted RBP20.62■□□□□ 0.89
SCARF1-203ENST00000434376 PREX2Q70Z35 1606 aa20.61■□□□□ 0.89
SCARF1-203ENST00000434376 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
SCARF1-203ENST00000434376 UHRF1BP1Q6BDS2 1440 aa20.6■□□□□ 0.89
SCARF1-203ENST00000434376 APAF1O14727 1248 aa20.6■□□□□ 0.89
SCARF1-203ENST00000434376 RTL5Q5HYW3 569 aaPredicted RBP20.6■□□□□ 0.89
SCARF1-203ENST00000434376 PPP2R1AP30153 589 aa20.59■□□□□ 0.89
SCARF1-203ENST00000434376 PPM1GO15355 546 aaPredicted RBP20.58■□□□□ 0.89
SCARF1-203ENST00000434376 ZCCHC11Q5TAX3 1644 aaKnown RBP20.58■□□□□ 0.88
SCARF1-203ENST00000434376 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
SCARF1-203ENST00000434376 FBXO31Q5XUX0 539 aaPredicted RBP20.56■□□□□ 0.88
SCARF1-203ENST00000434376 CABP2Q9NPB3 220 aa20.56■□□□□ 0.88
SCARF1-203ENST00000434376 RTN4Q9NQC3 1192 aaKnown RBP20.56■□□□□ 0.88
SCARF1-203ENST00000434376 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
SCARF1-203ENST00000434376 RRP1P56182 461 aaKnown RBP20.55■□□□□ 0.88
SCARF1-203ENST00000434376 FAM69CQ0P6D2 419 aa20.55■□□□□ 0.88
SCARF1-203ENST00000434376 ARHGEF5Q12774 1597 aa20.55■□□□□ 0.88
SCARF1-203ENST00000434376 BRD4O60885 1362 aaPredicted RBP20.55■□□□□ 0.88
SCARF1-203ENST00000434376 WDR7Q9Y4E6 1490 aa20.54■□□□□ 0.88
SCARF1-203ENST00000434376 ANP32AP39687 249 aaKnown RBP20.54■□□□□ 0.88
SCARF1-203ENST00000434376 SRPK2P78362 688 aaKnown RBP20.54■□□□□ 0.88
SCARF1-203ENST00000434376 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
SCARF1-203ENST00000434376 DUOX2Q9NRD8 1548 aa20.53■□□□□ 0.88
SCARF1-203ENST00000434376 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
SCARF1-203ENST00000434376 CRBNQ96SW2 442 aa20.53■□□□□ 0.88
SCARF1-203ENST00000434376 MINK1Q8N4C8 1332 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms