RNA–Protein interactions for RNA: ENST00000432504.1

TMEM50B-202, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 619 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-202ENST00000432504 AFAP1Q8N556 730 aa9.35□□□□□ -0.91
TMEM50B-202ENST00000432504 MYO5CQ9NQX4 1742 aa9.35□□□□□ -0.91
TMEM50B-202ENST00000432504 REREQ9P2R6 1566 aa9.35□□□□□ -0.91
TMEM50B-202ENST00000432504 TOM1O60784 492 aa9.34□□□□□ -0.91
TMEM50B-202ENST00000432504 CDK13Q14004 1512 aaKnown RBP9.34□□□□□ -0.91
TMEM50B-202ENST00000432504 MYO3AQ8NEV4 1616 aa9.34□□□□□ -0.91
TMEM50B-202ENST00000432504 TCOF1Q13428 1488 aaKnown RBP9.34□□□□□ -0.91
TMEM50B-202ENST00000432504 ZNF142P52746 1687 aaPredicted RBP9.33□□□□□ -0.92
TMEM50B-202ENST00000432504 AGLP35573 1532 aa9.33□□□□□ -0.92
TMEM50B-202ENST00000432504 LHX8Q68G74 356 aa9.33□□□□□ -0.92
TMEM50B-202ENST00000432504 RGS17Q9UGC6 210 aaPredicted RBP9.33□□□□□ -0.92
TMEM50B-202ENST00000432504 ALKQ9UM73 1620 aa9.33□□□□□ -0.92
TMEM50B-202ENST00000432504 NPATQ14207 1427 aa9.32□□□□□ -0.92
TMEM50B-202ENST00000432504 PLA2R1Q13018 1463 aa9.32□□□□□ -0.92
TMEM50B-202ENST00000432504 CEP170BQ9Y4F5 1589 aaPredicted RBP9.32□□□□□ -0.92
TMEM50B-202ENST00000432504 CNTLNQ9NXG0 1405 aa9.31□□□□□ -0.92
TMEM50B-202ENST00000432504 PKD2Q13563 968 aa9.31□□□□□ -0.92
TMEM50B-202ENST00000432504 EFCAB2Q5VUJ9 269 aa9.31□□□□□ -0.92
TMEM50B-202ENST00000432504 MROH2AA6NES4 1674 aa9.31□□□□□ -0.92
TMEM50B-202ENST00000432504 SETD1AO15047 1707 aaKnown RBP9.3□□□□□ -0.92
TMEM50B-202ENST00000432504 KIF14Q15058 1648 aa9.3□□□□□ -0.92
TMEM50B-202ENST00000432504 CPS1P31327 1500 aa9.3□□□□□ -0.92
TMEM50B-202ENST00000432504 ARHGAP5Q13017 1502 aa9.3□□□□□ -0.92
TMEM50B-202ENST00000432504 CLTCQ00610 1675 aaKnown RBP9.29□□□□□ -0.92
TMEM50B-202ENST00000432504 MLH3Q9UHC1 1453 aa9.28□□□□□ -0.92
TMEM50B-202ENST00000432504 ZMYM3Q14202 1370 aa9.28□□□□□ -0.92
TMEM50B-202ENST00000432504 SHANK2Q9UPX8 1470 aa9.28□□□□□ -0.92
TMEM50B-202ENST00000432504 KIDINS220Q9ULH0 1771 aa9.27□□□□□ -0.92
TMEM50B-202ENST00000432504 NEURL4Q96JN8 1562 aa9.27□□□□□ -0.93
TMEM50B-202ENST00000432504 POLR1AO95602 1720 aaPredicted RBP9.27□□□□□ -0.93
TMEM50B-202ENST00000432504 PTPRKQ15262 1439 aa9.26□□□□□ -0.93
TMEM50B-202ENST00000432504 CD44P16070 742 aaKnown RBP9.26□□□□□ -0.93
TMEM50B-202ENST00000432504 POTEAQ6S8J7 498 aa9.26□□□□□ -0.93
TMEM50B-202ENST00000432504 FARP1Q9Y4F1 1045 aaPredicted RBP9.25□□□□□ -0.93
TMEM50B-202ENST00000432504 ITSN2Q9NZM3 1697 aa9.25□□□□□ -0.93
TMEM50B-202ENST00000432504 CDC42BPBQ9Y5S2 1711 aa9.25□□□□□ -0.93
TMEM50B-202ENST00000432504 VWDEQ8N2E2 1590 aa9.24□□□□□ -0.93
TMEM50B-202ENST00000432504 DNMT1P26358 1616 aaKnown RBP9.24□□□□□ -0.93
TMEM50B-202ENST00000432504 ABCC1P33527 1531 aa9.24□□□□□ -0.93
TMEM50B-202ENST00000432504 ATP1B4Q9UN42 357 aaPredicted RBP9.22□□□□□ -0.93
TMEM50B-202ENST00000432504 STRCP1A6NGW2 1772 aa9.22□□□□□ -0.93
TMEM50B-202ENST00000432504 A2ML1A8K2U0 1454 aa9.21□□□□□ -0.93
TMEM50B-202ENST00000432504 RNF17Q9BXT8 1623 aaKnown RBP9.21□□□□□ -0.93
TMEM50B-202ENST00000432504 CLCN6P51797 869 aa9.21□□□□□ -0.94
TMEM50B-202ENST00000432504 POTEIP0CG38 1075 aa9.2□□□□□ -0.94
TMEM50B-202ENST00000432504 PREX2Q70Z35 1606 aa9.2□□□□□ -0.94
TMEM50B-202ENST00000432504 LRRC7Q96NW7 1537 aa9.19□□□□□ -0.94
TMEM50B-202ENST00000432504 SAMD9LQ8IVG5 1584 aa9.19□□□□□ -0.94
TMEM50B-202ENST00000432504 TROQ12816 1431 aaPredicted RBP9.18□□□□□ -0.94
TMEM50B-202ENST00000432504 PLXNC1O60486 1568 aa9.17□□□□□ -0.94
TMEM50B-202ENST00000432504 GGT6Q6P531 493 aa9.17□□□□□ -0.94
TMEM50B-202ENST00000432504 LRRIQ1Q96JM4 1722 aa9.17□□□□□ -0.94
TMEM50B-202ENST00000432504 NPHP4O75161 1426 aaPredicted RBP9.16□□□□□ -0.94
TMEM50B-202ENST00000432504 CLIP1P30622 1438 aa9.16□□□□□ -0.94
TMEM50B-202ENST00000432504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.16□□□□□ -0.94
TMEM50B-202ENST00000432504 IQGAP1P46940 1657 aa9.16□□□□□ -0.94
TMEM50B-202ENST00000432504 SYNMO15061 1565 aa9.16□□□□□ -0.94
TMEM50B-202ENST00000432504 UPF1Q92900 1129 aaKnown RBP eCLIP9.15□□□□□ -0.94
TMEM50B-202ENST00000432504 CDK11AQ9UQ88 783 aaPredicted RBP9.15□□□□□ -0.94
TMEM50B-202ENST00000432504 SYCP2Q9BX26 1530 aa9.15□□□□□ -0.95
TMEM50B-202ENST00000432504 A2MP01023 1474 aa9.15□□□□□ -0.95
TMEM50B-202ENST00000432504 CDC42BPAQ5VT25 1732 aa9.14□□□□□ -0.95
TMEM50B-202ENST00000432504 FBXO31Q5XUX0 539 aaPredicted RBP9.14□□□□□ -0.95
TMEM50B-202ENST00000432504 ANKLE2Q86XL3 938 aa9.14□□□□□ -0.95
TMEM50B-202ENST00000432504 ATP7AQ04656 1500 aa9.14□□□□□ -0.95
TMEM50B-202ENST00000432504 TNRQ92752 1358 aa9.13□□□□□ -0.95
TMEM50B-202ENST00000432504 DEPDC5O75140 1603 aa9.13□□□□□ -0.95
TMEM50B-202ENST00000432504 SPAG9O60271 1321 aaKnown RBP9.13□□□□□ -0.95
TMEM50B-202ENST00000432504 DCBLD2Q96PD2 775 aa9.13□□□□□ -0.95
TMEM50B-202ENST00000432504 MED14O60244 1454 aa9.13□□□□□ -0.95
TMEM50B-202ENST00000432504 XIRP1Q702N8 1843 aaKnown RBP9.12□□□□□ -0.95
TMEM50B-202ENST00000432504 INO80Q9ULG1 1556 aaPredicted RBP9.12□□□□□ -0.95
TMEM50B-202ENST00000432504 ZNF777Q9ULD5 760 aaPredicted RBP9.12□□□□□ -0.95
TMEM50B-202ENST00000432504 HNRNPMP52272 730 aaKnown RBP eCLIP9.11□□□□□ -0.95
TMEM50B-202ENST00000432504 TRIM52Q96A61 297 aa9.1□□□□□ -0.95
TMEM50B-202ENST00000432504 FMN1Q68DA7 1419 aa9.1□□□□□ -0.95
TMEM50B-202ENST00000432504 UGGT1Q9NYU2 1555 aa9.1□□□□□ -0.95
TMEM50B-202ENST00000432504 ZNF579Q8NAF0 562 aaKnown RBP9.09□□□□□ -0.95
TMEM50B-202ENST00000432504 ZRANB1Q9UGI0 708 aa9.09□□□□□ -0.95
TMEM50B-202ENST00000432504 ZC3H13Q5T200 1668 aaKnown RBP9.09□□□□□ -0.95
TMEM50B-202ENST00000432504 ROBO1Q9Y6N7 1651 aa9.09□□□□□ -0.95
TMEM50B-202ENST00000432504 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
TMEM50B-202ENST00000432504 ADGBQ8N7X0 1667 aa9.08□□□□□ -0.96
TMEM50B-202ENST00000432504 THEMISQ8N1K5 641 aaPredicted RBP9.08□□□□□ -0.96
TMEM50B-202ENST00000432504 STAG3Q9UJ98 1225 aa9.08□□□□□ -0.96
TMEM50B-202ENST00000432504 PZPP20742 1482 aa9.08□□□□□ -0.96
TMEM50B-202ENST00000432504 FAM135BQ49AJ0 1406 aa9.07□□□□□ -0.96
TMEM50B-202ENST00000432504 CREBZFQ9NS37 354 aa9.07□□□□□ -0.96
TMEM50B-202ENST00000432504 ARHGAP35Q9NRY4 1499 aa9.07□□□□□ -0.96
TMEM50B-202ENST00000432504 NLRP1Q9C000 1473 aa9.06□□□□□ -0.96
TMEM50B-202ENST00000432504 MIA2Q96PC5 1412 aa9.05□□□□□ -0.96
TMEM50B-202ENST00000432504 KDM5DQ9BY66 1539 aa9.05□□□□□ -0.96
TMEM50B-202ENST00000432504 PHLPP1O60346 1717 aa9.04□□□□□ -0.96
TMEM50B-202ENST00000432504 LRP6O75581 1613 aa9.04□□□□□ -0.96
TMEM50B-202ENST00000432504 GPATCH8Q9UKJ3 1502 aaKnown RBP9.04□□□□□ -0.96
TMEM50B-202ENST00000432504 RBM33Q96EV2 1170 aaKnown RBP9.02□□□□□ -0.97
TMEM50B-202ENST00000432504 KIAA1107Q9UPP5 1409 aa9.02□□□□□ -0.97
TMEM50B-202ENST00000432504 JCADQ9P266 1359 aa9.01□□□□□ -0.97
TMEM50B-202ENST00000432504 KIF3BO15066 747 aa9.01□□□□□ -0.97
TMEM50B-202ENST00000432504 CCDC18Q5T9S5 1454 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms