RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 RRP7AQ9Y3A4 280 aaKnown RBP14.53□□□□□ -0.08
RIMKLA-202ENST00000431473 ZNF771Q7L3S4 317 aaPredicted RBP14.53□□□□□ -0.08
RIMKLA-202ENST00000431473 HMMRO75330 724 aa14.53□□□□□ -0.08
RIMKLA-202ENST00000431473 FAM161AQ3B820 660 aa14.53□□□□□ -0.08
RIMKLA-202ENST00000431473 ZNF592Q92610 1267 aa14.53□□□□□ -0.08
RIMKLA-202ENST00000431473 NUP155O75694 1391 aa14.52□□□□□ -0.08
RIMKLA-202ENST00000431473 CCDC34Q96HJ3 373 aa14.52□□□□□ -0.09
RIMKLA-202ENST00000431473 BCL2L13Q9BXK5 485 aa14.52□□□□□ -0.09
RIMKLA-202ENST00000431473 H3BQV1 296 aa14.52□□□□□ -0.09
RIMKLA-202ENST00000431473 SETQ01105 290 aaPredicted RBP14.52□□□□□ -0.09
RIMKLA-202ENST00000431473 IFFO2Q5TF58 517 aa14.52□□□□□ -0.09
RIMKLA-202ENST00000431473 CENPQQ7L2Z9 268 aaPredicted RBP14.51□□□□□ -0.09
RIMKLA-202ENST00000431473 RILPL2Q969X0 211 aa14.51□□□□□ -0.09
RIMKLA-202ENST00000431473 WIZO95785 1651 aa14.51□□□□□ -0.09
RIMKLA-202ENST00000431473 PRM3Q9NNZ6 103 aa14.51□□□□□ -0.09
RIMKLA-202ENST00000431473 TPM3P06753 285 aa14.51□□□□□ -0.09
RIMKLA-202ENST00000431473 GGT6Q6P531 493 aa14.51□□□□□ -0.09
RIMKLA-202ENST00000431473 TAF7LQ5H9L4 462 aa14.5□□□□□ -0.09
RIMKLA-202ENST00000431473 GOLGA6L19H0YKK7 550 aa14.5□□□□□ -0.09
RIMKLA-202ENST00000431473 SF3A1Q15459 793 aaKnown RBP14.5□□□□□ -0.09
RIMKLA-202ENST00000431473 CCDC9Q9Y3X0 531 aaKnown RBP14.5□□□□□ -0.09
RIMKLA-202ENST00000431473 ANKRD45Q5TZF3 282 aa14.5□□□□□ -0.09
RIMKLA-202ENST00000431473 KIF15Q9NS87 1388 aa14.49□□□□□ -0.09
RIMKLA-202ENST00000431473 FAM13BQ9NYF5 915 aa14.49□□□□□ -0.09
RIMKLA-202ENST00000431473 CRBNQ96SW2 442 aa14.49□□□□□ -0.09
RIMKLA-202ENST00000431473 NLRP13Q86W25 1043 aa14.48□□□□□ -0.09
RIMKLA-202ENST00000431473 PATL2C9JE40 543 aaKnown RBP14.48□□□□□ -0.09
RIMKLA-202ENST00000431473 TPD52L1Q16890 204 aaPredicted RBP14.48□□□□□ -0.09
RIMKLA-202ENST00000431473 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.48□□□□□ -0.09
RIMKLA-202ENST00000431473 EXOC6Q8TAG9 804 aa14.47□□□□□ -0.09
RIMKLA-202ENST00000431473 CCDC88BA6NC98 1476 aa14.47□□□□□ -0.09
RIMKLA-202ENST00000431473 HDGFP51858 240 aaKnown RBP14.47□□□□□ -0.09
RIMKLA-202ENST00000431473 RRP1P56182 461 aaKnown RBP14.47□□□□□ -0.09
RIMKLA-202ENST00000431473 NUTM2DQ5VT03 806 aaPredicted RBP14.47□□□□□ -0.09
RIMKLA-202ENST00000431473 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.46□□□□□ -0.09
RIMKLA-202ENST00000431473 L3MBTL2Q969R5 705 aa14.46□□□□□ -0.09
RIMKLA-202ENST00000431473 CSB-PGBD3P0DP91 1061 aa14.46□□□□□ -0.09
RIMKLA-202ENST00000431473 SKOR2Q2VWA4 1001 aaPredicted RBP14.46□□□□□ -0.09
RIMKLA-202ENST00000431473 FMN1Q68DA7 1419 aa14.46□□□□□ -0.1
RIMKLA-202ENST00000431473 BCL11BQ9C0K0 894 aaPredicted RBP14.46□□□□□ -0.1
RIMKLA-202ENST00000431473 TOMM22Q9NS69 142 aa14.45□□□□□ -0.1
RIMKLA-202ENST00000431473 PRDM2Q13029 1718 aa14.45□□□□□ -0.1
RIMKLA-202ENST00000431473 PDE3BQ13370 1112 aa14.45□□□□□ -0.1
RIMKLA-202ENST00000431473 MYBBP1AQ9BQG0 1328 aaKnown RBP14.45□□□□□ -0.1
RIMKLA-202ENST00000431473 MCTP1Q6DN14 999 aa14.44□□□□□ -0.1
RIMKLA-202ENST00000431473 VPS53Q5VIR6 699 aa14.44□□□□□ -0.1
RIMKLA-202ENST00000431473 PHLDB1Q86UU1 1377 aa14.44□□□□□ -0.1
RIMKLA-202ENST00000431473 BECN2A8MW95 431 aa14.44□□□□□ -0.1
RIMKLA-202ENST00000431473 FAM184AQ8NB25 1140 aa14.43□□□□□ -0.1
RIMKLA-202ENST00000431473 TSR1Q2NL82 804 aaKnown RBP14.43□□□□□ -0.1
RIMKLA-202ENST00000431473 ZBED9Q6R2W3 1325 aa14.43□□□□□ -0.1
RIMKLA-202ENST00000431473 FANCIQ9NVI1 1328 aa14.42□□□□□ -0.1
RIMKLA-202ENST00000431473 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
RIMKLA-202ENST00000431473 CEP89Q96ST8 783 aa14.41□□□□□ -0.1
RIMKLA-202ENST00000431473 TERF2IPQ9NYB0 399 aa14.41□□□□□ -0.1
RIMKLA-202ENST00000431473 KIF3AQ9Y496 699 aa14.41□□□□□ -0.1
RIMKLA-202ENST00000431473 ATP6V1DQ9Y5K8 247 aa14.41□□□□□ -0.1
RIMKLA-202ENST00000431473 ANKRD30AQ9BXX3 1397 aa14.41□□□□□ -0.1
RIMKLA-202ENST00000431473 ELL2O00472 640 aaPredicted RBP14.41□□□□□ -0.1
RIMKLA-202ENST00000431473 FBXW7Q969H0 707 aa14.4□□□□□ -0.1
RIMKLA-202ENST00000431473 LTV1Q96GA3 475 aaPredicted RBP14.4□□□□□ -0.1
RIMKLA-202ENST00000431473 COG6Q9Y2V7 657 aa14.4□□□□□ -0.1
RIMKLA-202ENST00000431473 PANK3Q9H999 370 aa14.4□□□□□ -0.1
RIMKLA-202ENST00000431473 GPS2Q13227 327 aa14.39□□□□□ -0.11
RIMKLA-202ENST00000431473 MARCH6O60337 910 aa14.38□□□□□ -0.11
RIMKLA-202ENST00000431473 LMOD3Q0VAK6 560 aa14.38□□□□□ -0.11
RIMKLA-202ENST00000431473 CCDC70Q6NSX1 233 aa14.38□□□□□ -0.11
RIMKLA-202ENST00000431473 ST20-MTHFSA0A0A6YYL1 179 aa14.37□□□□□ -0.11
RIMKLA-202ENST00000431473 TPM1P09493 284 aa14.37□□□□□ -0.11
RIMKLA-202ENST00000431473 HOMER1Q86YM7 354 aa14.37□□□□□ -0.11
RIMKLA-202ENST00000431473 NUTM2FA1L443 756 aa14.37□□□□□ -0.11
RIMKLA-202ENST00000431473 FAM43AQ8N2R8 423 aa14.37□□□□□ -0.11
RIMKLA-202ENST00000431473 FRAT2O75474 233 aaPredicted RBP14.37□□□□□ -0.11
RIMKLA-202ENST00000431473 AMPHP49418 695 aa14.36□□□□□ -0.11
RIMKLA-202ENST00000431473 TEX35Q5T0J7 233 aa14.36□□□□□ -0.11
RIMKLA-202ENST00000431473 HNRNPMP52272 730 aaKnown RBP eCLIP14.36□□□□□ -0.11
RIMKLA-202ENST00000431473 ZKSCAN2Q63HK3 967 aa14.35□□□□□ -0.11
RIMKLA-202ENST00000431473 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.35□□□□□ -0.11
RIMKLA-202ENST00000431473 HDAC5Q9UQL6 1122 aa14.35□□□□□ -0.11
RIMKLA-202ENST00000431473 E9PSI1 815 aa14.35□□□□□ -0.11
RIMKLA-202ENST00000431473 TMX4Q9H1E5 349 aaPredicted RBP14.35□□□□□ -0.11
RIMKLA-202ENST00000431473 TPM2P07951 284 aa14.34□□□□□ -0.11
RIMKLA-202ENST00000431473 DIAPH3Q9NSV4 1193 aa14.34□□□□□ -0.11
RIMKLA-202ENST00000431473 PCMTD1Q96MG8 357 aaPredicted RBP14.34□□□□□ -0.11
RIMKLA-202ENST00000431473 CHMP4AQ9BY43 222 aa14.34□□□□□ -0.11
RIMKLA-202ENST00000431473 WWC1Q8IX03 1113 aa14.33□□□□□ -0.11
RIMKLA-202ENST00000431473 ANO2Q9NQ90 1003 aa14.33□□□□□ -0.11
RIMKLA-202ENST00000431473 TRAK1Q9UPV9 953 aa14.33□□□□□ -0.11
RIMKLA-202ENST00000431473 FBXO3Q9UK99 471 aa14.33□□□□□ -0.12
RIMKLA-202ENST00000431473 USP47Q96K76 1375 aa14.33□□□□□ -0.12
RIMKLA-202ENST00000431473 FOSBP53539 338 aa14.33□□□□□ -0.12
RIMKLA-202ENST00000431473 PRKRIP1Q9H875 184 aaPredicted RBP14.33□□□□□ -0.12
RIMKLA-202ENST00000431473 G3V3G9 751 aa14.33□□□□□ -0.12
RIMKLA-202ENST00000431473 DCAF8Q5TAQ9 597 aa14.33□□□□□ -0.12
RIMKLA-202ENST00000431473 AKAP17AQ02040 695 aaKnown RBP14.32□□□□□ -0.12
RIMKLA-202ENST00000431473 IFT57Q9NWB7 429 aa14.32□□□□□ -0.12
RIMKLA-202ENST00000431473 REC8O95072 547 aa14.32□□□□□ -0.12
RIMKLA-202ENST00000431473 BICD2Q8TD16 824 aa14.32□□□□□ -0.12
RIMKLA-202ENST00000431473 NECTIN2Q92692 538 aa14.32□□□□□ -0.12
RIMKLA-202ENST00000431473 CCDC18Q5T9S5 1454 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms