RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 STK17AQ9UEE5 414 aa6.75□□□□□ -1.33
CDC40-204ENST00000431461 V9GY48 417 aaPredicted RBP6.75□□□□□ -1.33
CDC40-204ENST00000431461 HS6ST3Q8IZP7 471 aa6.74□□□□□ -1.33
CDC40-204ENST00000431461 PRKD2Q9BZL6 878 aa6.74□□□□□ -1.33
CDC40-204ENST00000431461 PDE4AP27815 886 aa6.73□□□□□ -1.33
CDC40-204ENST00000431461 FBXW7Q969H0 707 aa6.73□□□□□ -1.33
CDC40-204ENST00000431461 ZFRQ96KR1 1074 aaKnown RBP6.73□□□□□ -1.33
CDC40-204ENST00000431461 TREML4Q6UXN2 200 aa6.72□□□□□ -1.33
CDC40-204ENST00000431461 DNAJC5Q9H3Z4 198 aa6.72□□□□□ -1.33
CDC40-204ENST00000431461 BCAMP50895 628 aa6.71□□□□□ -1.34
CDC40-204ENST00000431461 PDZRN3Q9UPQ7 1066 aa6.71□□□□□ -1.34
CDC40-204ENST00000431461 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
CDC40-204ENST00000431461 WBP1LQ9NX94 342 aa6.7□□□□□ -1.34
CDC40-204ENST00000431461 TSR3Q9UJK0 312 aaKnown RBP6.7□□□□□ -1.34
CDC40-204ENST00000431461 MAP3K9P80192 1104 aa6.69□□□□□ -1.34
CDC40-204ENST00000431461 PROX2Q3B8N5 592 aa6.68□□□□□ -1.34
CDC40-204ENST00000431461 TYW1BQ6NUM6 668 aa6.68□□□□□ -1.34
CDC40-204ENST00000431461 PCDHGA10Q9Y5H3 936 aa6.68□□□□□ -1.34
CDC40-204ENST00000431461 PHF14O94880 888 aa6.67□□□□□ -1.34
CDC40-204ENST00000431461 FAM98CQ17RN3 349 aaKnown RBP6.67□□□□□ -1.34
CDC40-204ENST00000431461 KIAA1468Q9P260 1216 aa6.67□□□□□ -1.34
CDC40-204ENST00000431461 COL9A1P20849 921 aa6.66□□□□□ -1.34
CDC40-204ENST00000431461 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.66□□□□□ -1.34
CDC40-204ENST00000431461 LRCH3Q96II8 777 aa6.65□□□□□ -1.34
CDC40-204ENST00000431461 NCKAP5LQ9HCH0 1330 aa6.65□□□□□ -1.35
CDC40-204ENST00000431461 INSM1Q01101 510 aaPredicted RBP6.64□□□□□ -1.35
CDC40-204ENST00000431461 DDX27Q96GQ7 796 aaKnown RBP6.64□□□□□ -1.35
CDC40-204ENST00000431461 EPAS1Q99814 870 aa6.64□□□□□ -1.35
CDC40-204ENST00000431461 TRIM6-TRIM34B2RNG4 842 aa6.63□□□□□ -1.35
CDC40-204ENST00000431461 CHGAP10645 457 aaKnown RBP6.63□□□□□ -1.35
CDC40-204ENST00000431461 HPS5Q9UPZ3 1129 aa6.63□□□□□ -1.35
CDC40-204ENST00000431461 MFSD10Q14728 455 aa6.62□□□□□ -1.35
CDC40-204ENST00000431461 TJAP1Q5JTD0 557 aa6.61□□□□□ -1.35
CDC40-204ENST00000431461 C6orf132Q5T0Z8 1188 aa6.61□□□□□ -1.35
CDC40-204ENST00000431461 PPP4CP60510 307 aa6.6□□□□□ -1.35
CDC40-204ENST00000431461 PKDCCQ504Y2 493 aa6.6□□□□□ -1.35
CDC40-204ENST00000431461 LARP6Q9BRS8 491 aaKnown RBP6.6□□□□□ -1.35
CDC40-204ENST00000431461 IL21Q9HBE4 155 aa6.59□□□□□ -1.35
CDC40-204ENST00000431461 SEPT9Q9UHD8 586 aaPredicted RBP6.59□□□□□ -1.35
CDC40-204ENST00000431461 WIPF1O43516 503 aa6.58□□□□□ -1.36
CDC40-204ENST00000431461 DGAT1O75907 488 aa6.58□□□□□ -1.36
CDC40-204ENST00000431461 MYT1Q01538 1121 aa6.58□□□□□ -1.36
CDC40-204ENST00000431461 NKX1-1Q15270 411 aaPredicted RBP6.58□□□□□ -1.36
CDC40-204ENST00000431461 PACS2Q86VP3 889 aa6.58□□□□□ -1.36
CDC40-204ENST00000431461 POTECB2RU33 542 aa6.57□□□□□ -1.36
CDC40-204ENST00000431461 WFS1O76024 890 aa6.57□□□□□ -1.36
CDC40-204ENST00000431461 PPP1R18Q6NYC8 613 aa6.57□□□□□ -1.36
CDC40-204ENST00000431461 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.57□□□□□ -1.36
CDC40-204ENST00000431461 EMILIN3Q9NT22 766 aa6.57□□□□□ -1.36
CDC40-204ENST00000431461 GGCXP38435 758 aa6.55□□□□□ -1.36
CDC40-204ENST00000431461 NECTIN2Q92692 538 aa6.54□□□□□ -1.36
CDC40-204ENST00000431461 MTRQ99707 1265 aa6.54□□□□□ -1.36
CDC40-204ENST00000431461 TMUB1Q9BVT8 246 aa6.54□□□□□ -1.36
CDC40-204ENST00000431461 SUZ12Q15022 739 aaKnown RBP6.52□□□□□ -1.37
CDC40-204ENST00000431461 FAM181BA6NEQ2 426 aa6.51□□□□□ -1.37
CDC40-204ENST00000431461 CAMK2BQ13554 666 aa6.5□□□□□ -1.37
CDC40-204ENST00000431461 CERKQ8TCT0 537 aa6.5□□□□□ -1.37
CDC40-204ENST00000431461 TSKSQ9UJT2 592 aa6.5□□□□□ -1.37
CDC40-204ENST00000431461 HDGFP51858 240 aaKnown RBP6.49□□□□□ -1.37
CDC40-204ENST00000431461 SAMD7Q7Z3H4 446 aa6.48□□□□□ -1.37
CDC40-204ENST00000431461 RBM33Q96EV2 1170 aaKnown RBP6.48□□□□□ -1.37
CDC40-204ENST00000431461 GTPBP6O43824 516 aaPredicted RBP6.47□□□□□ -1.37
CDC40-204ENST00000431461 PRR20EP86478 221 aa6.47□□□□□ -1.37
CDC40-204ENST00000431461 PRR20CP86479 221 aa6.47□□□□□ -1.37
CDC40-204ENST00000431461 PRR20DP86480 221 aa6.47□□□□□ -1.37
CDC40-204ENST00000431461 PRR20BP86481 221 aa6.47□□□□□ -1.37
CDC40-204ENST00000431461 PRR20AP86496 221 aa6.47□□□□□ -1.37
CDC40-204ENST00000431461 EN1Q05925 392 aaPredicted RBP6.47□□□□□ -1.37
CDC40-204ENST00000431461 TRIM67Q6ZTA4 783 aa6.47□□□□□ -1.37
CDC40-204ENST00000431461 ZNF516Q92618 1163 aa6.46□□□□□ -1.38
CDC40-204ENST00000431461 NBPF26B4DH59 902 aa6.45□□□□□ -1.38
CDC40-204ENST00000431461 NFX1Q12986 1120 aaKnown RBP6.45□□□□□ -1.38
CDC40-204ENST00000431461 CDCA7LQ96GN5 454 aa6.45□□□□□ -1.38
CDC40-204ENST00000431461 FAM187AA6NFU0 413 aa6.44□□□□□ -1.38
CDC40-204ENST00000431461 PRSS12P56730 875 aa6.44□□□□□ -1.38
CDC40-204ENST00000431461 MAP3K7O43318 606 aa6.43□□□□□ -1.38
CDC40-204ENST00000431461 TATDN2Q93075 761 aa6.43□□□□□ -1.38
CDC40-204ENST00000431461 DPYSL4O14531 572 aa6.42□□□□□ -1.38
CDC40-204ENST00000431461 SLC19A1P41440 591 aa6.42□□□□□ -1.38
CDC40-204ENST00000431461 APLP1P51693 650 aa6.42□□□□□ -1.38
CDC40-204ENST00000431461 PRR14Q9BWN1 585 aa6.42□□□□□ -1.38
CDC40-204ENST00000431461 AAASQ9NRG9 546 aa6.42□□□□□ -1.38
CDC40-204ENST00000431461 RBM27Q9P2N5 1060 aaKnown RBP6.42□□□□□ -1.38
CDC40-204ENST00000431461 ZNF598Q86UK7 904 aaKnown RBP6.41□□□□□ -1.38
CDC40-204ENST00000431461 CADPS2Q86UW7 1296 aa6.41□□□□□ -1.38
CDC40-204ENST00000431461 DDX12PQ92771 950 aa6.41□□□□□ -1.38
CDC40-204ENST00000431461 SPDYE16A6NNV3 312 aaPredicted RBP6.4□□□□□ -1.38
CDC40-204ENST00000431461 SMAPO00193 183 aa6.4□□□□□ -1.38
CDC40-204ENST00000431461 ZPR1O75312 459 aa6.4□□□□□ -1.38
CDC40-204ENST00000431461 DCAF8L2P0C7V8 631 aa6.4□□□□□ -1.38
CDC40-204ENST00000431461 SLC4A3P48751 1232 aa6.4□□□□□ -1.38
CDC40-204ENST00000431461 NBR1Q14596 966 aa6.4□□□□□ -1.38
CDC40-204ENST00000431461 TSR1Q2NL82 804 aaKnown RBP6.4□□□□□ -1.38
CDC40-204ENST00000431461 SLF2Q8IX21 1173 aa6.4□□□□□ -1.38
CDC40-204ENST00000431461 NKX2-3Q8TAU0 364 aa6.4□□□□□ -1.38
CDC40-204ENST00000431461 PNMA3Q9UL41 463 aa6.4□□□□□ -1.38
CDC40-204ENST00000431461 ST8SIA5O15466 376 aa6.39□□□□□ -1.39
CDC40-204ENST00000431461 PDIA6Q15084 440 aa6.39□□□□□ -1.39
CDC40-204ENST00000431461 SPRYD7Q5W111 196 aa6.39□□□□□ -1.39
CDC40-204ENST00000431461 RNF40O75150 1001 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms