RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 RALGAPBQ86X10 1494 aa20.29■□□□□ 0.84
LINC00839-202ENST00000429940 UHRF1BP1Q6BDS2 1440 aa20.29■□□□□ 0.84
LINC00839-202ENST00000429940 ANKRD50Q9ULJ7 1429 aa20.29■□□□□ 0.84
LINC00839-202ENST00000429940 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.84
LINC00839-202ENST00000429940 PNISRQ8TF01 805 aaKnown RBP20.27■□□□□ 0.84
LINC00839-202ENST00000429940 CCDC136Q96JN2 1154 aa20.27■□□□□ 0.83
LINC00839-202ENST00000429940 PREX2Q70Z35 1606 aa20.26■□□□□ 0.83
LINC00839-202ENST00000429940 TMC1Q8TDI8 760 aa20.26■□□□□ 0.83
LINC00839-202ENST00000429940 MYO5CQ9NQX4 1742 aa20.26■□□□□ 0.83
LINC00839-202ENST00000429940 ARHGEF12Q9NZN5 1544 aa20.25■□□□□ 0.83
LINC00839-202ENST00000429940 CARD11Q9BXL7 1154 aa20.24■□□□□ 0.83
LINC00839-202ENST00000429940 MYT1LQ9UL68 1186 aa20.24■□□□□ 0.83
LINC00839-202ENST00000429940 SAMD9LQ8IVG5 1584 aa20.23■□□□□ 0.83
LINC00839-202ENST00000429940 NUP155O75694 1391 aa20.23■□□□□ 0.83
LINC00839-202ENST00000429940 KIF15Q9NS87 1388 aa20.23■□□□□ 0.83
LINC00839-202ENST00000429940 PLCH2O75038 1416 aa20.23■□□□□ 0.83
LINC00839-202ENST00000429940 SENP3-EIF4A1A0A087X0R7 540 aa20.23■□□□□ 0.83
LINC00839-202ENST00000429940 NOP58Q9Y2X3 529 aaKnown RBP20.23■□□□□ 0.83
LINC00839-202ENST00000429940 SHANK2Q9UPX8 1470 aa20.21■□□□□ 0.83
LINC00839-202ENST00000429940 C9orf84Q5VXU9 1444 aa20.2■□□□□ 0.82
LINC00839-202ENST00000429940 EFCAB2Q5VUJ9 269 aa20.19■□□□□ 0.82
LINC00839-202ENST00000429940 KDM5DQ9BY66 1539 aa20.19■□□□□ 0.82
LINC00839-202ENST00000429940 LRPPRCP42704 1394 aaKnown RBP20.18■□□□□ 0.82
LINC00839-202ENST00000429940 ABCA9Q8IUA7 1624 aa20.18■□□□□ 0.82
LINC00839-202ENST00000429940 BRD4O60885 1362 aaPredicted RBP20.17■□□□□ 0.82
LINC00839-202ENST00000429940 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
LINC00839-202ENST00000429940 ST20-MTHFSA0A0A6YYL1 179 aa20.17■□□□□ 0.82
LINC00839-202ENST00000429940 KDM2AQ9Y2K7 1162 aa20.17■□□□□ 0.82
LINC00839-202ENST00000429940 MYBBP1AQ9BQG0 1328 aaKnown RBP20.17■□□□□ 0.82
LINC00839-202ENST00000429940 KTN1Q86UP2 1357 aaKnown RBP20.17■□□□□ 0.82
LINC00839-202ENST00000429940 E9PCH4 1651 aa20.16■□□□□ 0.82
LINC00839-202ENST00000429940 FAM69CQ0P6D2 419 aa20.15■□□□□ 0.82
LINC00839-202ENST00000429940 RALBP1Q15311 655 aa20.15■□□□□ 0.82
LINC00839-202ENST00000429940 CD109Q6YHK3 1445 aa20.14■□□□□ 0.82
LINC00839-202ENST00000429940 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.81
LINC00839-202ENST00000429940 DCAF11Q8TEB1 546 aa20.14■□□□□ 0.81
LINC00839-202ENST00000429940 FANCAO15360 1455 aa20.13■□□□□ 0.81
LINC00839-202ENST00000429940 ANP32AP39687 249 aaKnown RBP20.13■□□□□ 0.81
LINC00839-202ENST00000429940 TSPY4P0CV99 314 aa20.13■□□□□ 0.81
LINC00839-202ENST00000429940 TSPY10P0CW01 314 aa20.13■□□□□ 0.81
LINC00839-202ENST00000429940 AFAP1Q8N556 730 aa20.13■□□□□ 0.81
LINC00839-202ENST00000429940 DEKP35659 375 aaKnown RBP20.1■□□□□ 0.81
LINC00839-202ENST00000429940 TRAPPC8Q9Y2L5 1435 aa20.1■□□□□ 0.81
LINC00839-202ENST00000429940 IPO9Q96P70 1041 aaKnown RBP20.09■□□□□ 0.81
LINC00839-202ENST00000429940 DNAJC5Q9H3Z4 198 aa20.09■□□□□ 0.81
LINC00839-202ENST00000429940 RRP1P56182 461 aaKnown RBP20.08■□□□□ 0.81
LINC00839-202ENST00000429940 NBR1Q14596 966 aa20.07■□□□□ 0.8
LINC00839-202ENST00000429940 ARHGEF5Q12774 1597 aa20.07■□□□□ 0.8
LINC00839-202ENST00000429940 CCDC141Q6ZP82 1450 aa20.07■□□□□ 0.8
LINC00839-202ENST00000429940 ABCC1P33527 1531 aa20.06■□□□□ 0.8
LINC00839-202ENST00000429940 TSPOAP1O95153 1857 aa20.06■□□□□ 0.8
LINC00839-202ENST00000429940 TRPM1Q7Z4N2 1603 aa20.05■□□□□ 0.8
LINC00839-202ENST00000429940 SCAPERQ9BY12 1400 aa20.05■□□□□ 0.8
LINC00839-202ENST00000429940 NLRP13Q86W25 1043 aa20.04■□□□□ 0.8
LINC00839-202ENST00000429940 RCAN3Q9UKA8 241 aa20.04■□□□□ 0.8
LINC00839-202ENST00000429940 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
LINC00839-202ENST00000429940 ADGRL1O94910 1474 aa20.04■□□□□ 0.8
LINC00839-202ENST00000429940 ARAP3Q8WWN8 1544 aa20.04■□□□□ 0.8
LINC00839-202ENST00000429940 DIP2BQ9P265 1576 aa20.03■□□□□ 0.8
LINC00839-202ENST00000429940 PARD3Q8TEW0 1356 aa20.03■□□□□ 0.8
LINC00839-202ENST00000429940 ZBTB47Q9UFB7 747 aaPredicted RBP20.03■□□□□ 0.8
LINC00839-202ENST00000429940 RSPH4AQ5TD94 716 aa20.02■□□□□ 0.8
LINC00839-202ENST00000429940 EXOC6Q8TAG9 804 aa20.02■□□□□ 0.8
LINC00839-202ENST00000429940 PRAG1Q86YV5 1406 aa20.02■□□□□ 0.8
LINC00839-202ENST00000429940 PLEKHH2Q8IVE3 1493 aa20.02■□□□□ 0.8
LINC00839-202ENST00000429940 SALL2Q9Y467 1007 aaPredicted RBP20.01■□□□□ 0.79
LINC00839-202ENST00000429940 MAP3K4Q9Y6R4 1608 aa20■□□□□ 0.79
LINC00839-202ENST00000429940 CCDC144AA2RUR9 1427 aa20■□□□□ 0.79
LINC00839-202ENST00000429940 RAPGEF3O95398 923 aa20■□□□□ 0.79
LINC00839-202ENST00000429940 PDE3BQ13370 1112 aa20■□□□□ 0.79
LINC00839-202ENST00000429940 SPAG9O60271 1321 aaKnown RBP19.98■□□□□ 0.79
LINC00839-202ENST00000429940 TCERG1O14776 1098 aaKnown RBP19.97■□□□□ 0.79
LINC00839-202ENST00000429940 KIF13AQ9H1H9 1805 aa19.96■□□□□ 0.79
LINC00839-202ENST00000429940 GLI2P10070 1586 aa19.96■□□□□ 0.79
LINC00839-202ENST00000429940 PER1O15534 1290 aaPredicted RBP19.96■□□□□ 0.79
LINC00839-202ENST00000429940 NBPF1Q3BBV0 1214 aa19.95■□□□□ 0.78
LINC00839-202ENST00000429940 RGL3Q3MIN7 710 aa19.95■□□□□ 0.78
LINC00839-202ENST00000429940 COL17A1Q9UMD9 1497 aaPredicted RBP19.94■□□□□ 0.78
LINC00839-202ENST00000429940 LAMC1P11047 1609 aa19.94■□□□□ 0.78
LINC00839-202ENST00000429940 GPRASP1Q5JY77 1395 aa19.93■□□□□ 0.78
LINC00839-202ENST00000429940 UNC13BO14795 1591 aa19.93■□□□□ 0.78
LINC00839-202ENST00000429940 A2MP01023 1474 aa19.93■□□□□ 0.78
LINC00839-202ENST00000429940 RTL5Q5HYW3 569 aaPredicted RBP19.92■□□□□ 0.78
LINC00839-202ENST00000429940 CDCA7LQ96GN5 454 aa19.92■□□□□ 0.78
LINC00839-202ENST00000429940 PRDM15P57071 1507 aaPredicted RBP19.92■□□□□ 0.78
LINC00839-202ENST00000429940 WASHC2CQ9Y4E1 1318 aa19.92■□□□□ 0.78
LINC00839-202ENST00000429940 NPM2Q86SE8 214 aaKnown RBP19.91■□□□□ 0.78
LINC00839-202ENST00000429940 PPRC1Q5VV67 1664 aaKnown RBP19.91■□□□□ 0.78
LINC00839-202ENST00000429940 DISP3Q9P2K9 1392 aa19.91■□□□□ 0.78
LINC00839-202ENST00000429940 CC2D1BQ5T0F9 858 aaKnown RBP19.91■□□□□ 0.78
LINC00839-202ENST00000429940 PLA2R1Q13018 1463 aa19.91■□□□□ 0.78
LINC00839-202ENST00000429940 BLMP54132 1417 aaPredicted RBP19.9■□□□□ 0.78
LINC00839-202ENST00000429940 TRHP20396 242 aaPredicted RBP19.9■□□□□ 0.78
LINC00839-202ENST00000429940 MAST1Q9Y2H9 1570 aa19.9■□□□□ 0.78
LINC00839-202ENST00000429940 PDE4AP27815 886 aa19.9■□□□□ 0.78
LINC00839-202ENST00000429940 ZMYM4Q5VZL5 1548 aa19.89■□□□□ 0.77
LINC00839-202ENST00000429940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.89■□□□□ 0.77
LINC00839-202ENST00000429940 EIF2AK4Q9P2K8 1649 aaKnown RBP19.89■□□□□ 0.77
LINC00839-202ENST00000429940 INSRP06213 1382 aa19.89■□□□□ 0.77
LINC00839-202ENST00000429940 MS4A1P11836 297 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms