RNA–Protein interactions for RNA: ENST00000429433.3

BEND3-202, Transcript of BEN domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEND3, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3-202ENST00000429433 A0A0U1RQG5 324 aaPredicted RBP13.01□□□□□ -0.33
BEND3-202ENST00000429433 KIF16BQ96L93 1317 aa13.01□□□□□ -0.33
BEND3-202ENST00000429433 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
BEND3-202ENST00000429433 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
BEND3-202ENST00000429433 SPAG9O60271 1321 aaKnown RBP13□□□□□ -0.33
BEND3-202ENST00000429433 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
BEND3-202ENST00000429433 NUTM2FA1L443 756 aa13□□□□□ -0.33
BEND3-202ENST00000429433 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
BEND3-202ENST00000429433 ELL2O00472 640 aaPredicted RBP13□□□□□ -0.33
BEND3-202ENST00000429433 PDE4AP27815 886 aa13□□□□□ -0.33
BEND3-202ENST00000429433 FMN1Q68DA7 1419 aa13□□□□□ -0.33
BEND3-202ENST00000429433 DDX49Q9Y6V7 483 aaKnown RBP12.99□□□□□ -0.33
BEND3-202ENST00000429433 NGEFQ8N5V2 710 aa12.99□□□□□ -0.33
BEND3-202ENST00000429433 MPHOSPH9Q99550 1183 aa12.99□□□□□ -0.33
BEND3-202ENST00000429433 BAZ1AQ9NRL2 1556 aaPredicted RBP12.99□□□□□ -0.33
BEND3-202ENST00000429433 CLSTN1O94985 981 aa12.98□□□□□ -0.33
BEND3-202ENST00000429433 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
BEND3-202ENST00000429433 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.98□□□□□ -0.33
BEND3-202ENST00000429433 CGNL1Q0VF96 1302 aa12.98□□□□□ -0.33
BEND3-202ENST00000429433 MTERF4Q7Z6M4 381 aaKnown RBP12.98□□□□□ -0.33
BEND3-202ENST00000429433 CCDC70Q6NSX1 233 aa12.98□□□□□ -0.33
BEND3-202ENST00000429433 CCDC9Q9Y3X0 531 aaKnown RBP12.97□□□□□ -0.33
BEND3-202ENST00000429433 KIF15Q9NS87 1388 aa12.97□□□□□ -0.33
BEND3-202ENST00000429433 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
BEND3-202ENST00000429433 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
BEND3-202ENST00000429433 MAP7D2Q96T17 732 aa12.97□□□□□ -0.33
BEND3-202ENST00000429433 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
BEND3-202ENST00000429433 C11orf95C9JLR9 678 aaPredicted RBP12.96□□□□□ -0.33
BEND3-202ENST00000429433 TEX35Q5T0J7 233 aa12.96□□□□□ -0.33
BEND3-202ENST00000429433 CRBNQ96SW2 442 aa12.96□□□□□ -0.34
BEND3-202ENST00000429433 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
BEND3-202ENST00000429433 TPM1P09493 284 aa12.95□□□□□ -0.34
BEND3-202ENST00000429433 MYBBP1AQ9BQG0 1328 aaKnown RBP12.95□□□□□ -0.34
BEND3-202ENST00000429433 TSR1Q2NL82 804 aaKnown RBP12.95□□□□□ -0.34
BEND3-202ENST00000429433 GGT6Q6P531 493 aa12.95□□□□□ -0.34
BEND3-202ENST00000429433 CEP89Q96ST8 783 aa12.95□□□□□ -0.34
BEND3-202ENST00000429433 SF3A1Q15459 793 aaKnown RBP12.95□□□□□ -0.34
BEND3-202ENST00000429433 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
BEND3-202ENST00000429433 ANKRD30AQ9BXX3 1397 aa12.95□□□□□ -0.34
BEND3-202ENST00000429433 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
BEND3-202ENST00000429433 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
BEND3-202ENST00000429433 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
BEND3-202ENST00000429433 BECN2A8MW95 431 aa12.94□□□□□ -0.34
BEND3-202ENST00000429433 CHMP5Q9NZZ3 219 aa12.94□□□□□ -0.34
BEND3-202ENST00000429433 SLC4A10Q6U841 1118 aa12.93□□□□□ -0.34
BEND3-202ENST00000429433 GORABQ5T7V8 394 aa12.93□□□□□ -0.34
BEND3-202ENST00000429433 ZNF771Q7L3S4 317 aaPredicted RBP12.93□□□□□ -0.34
BEND3-202ENST00000429433 AAMPQ13685 434 aa12.92□□□□□ -0.34
BEND3-202ENST00000429433 RASSF8Q8NHQ8 419 aa12.91□□□□□ -0.34
BEND3-202ENST00000429433 ISY1Q9ULR0 285 aaKnown RBP12.91□□□□□ -0.34
BEND3-202ENST00000429433 PDE4CQ08493 712 aa12.91□□□□□ -0.34
BEND3-202ENST00000429433 E9PSI1 815 aa12.91□□□□□ -0.34
BEND3-202ENST00000429433 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
BEND3-202ENST00000429433 REC8O95072 547 aa12.9□□□□□ -0.34
BEND3-202ENST00000429433 NUP155O75694 1391 aa12.9□□□□□ -0.34
BEND3-202ENST00000429433 TPM2P07951 284 aa12.9□□□□□ -0.34
BEND3-202ENST00000429433 HNRNPMP52272 730 aaKnown RBP eCLIP12.9□□□□□ -0.34
BEND3-202ENST00000429433 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.35
BEND3-202ENST00000429433 FAM43AQ8N2R8 423 aa12.9□□□□□ -0.35
BEND3-202ENST00000429433 ST20-MTHFSA0A0A6YYL1 179 aa12.89□□□□□ -0.35
BEND3-202ENST00000429433 COG6Q9Y2V7 657 aa12.89□□□□□ -0.35
BEND3-202ENST00000429433 ZKSCAN2Q63HK3 967 aa12.89□□□□□ -0.35
BEND3-202ENST00000429433 H3BQV1 296 aa12.89□□□□□ -0.35
BEND3-202ENST00000429433 IFFO2Q5TF58 517 aa12.89□□□□□ -0.35
BEND3-202ENST00000429433 SKAP1Q86WV1 359 aa12.89□□□□□ -0.35
BEND3-202ENST00000429433 RSPH4AQ5TD94 716 aa12.88□□□□□ -0.35
BEND3-202ENST00000429433 ACBD3Q9H3P7 528 aa12.88□□□□□ -0.35
BEND3-202ENST00000429433 NUCB2P80303 420 aa12.88□□□□□ -0.35
BEND3-202ENST00000429433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
BEND3-202ENST00000429433 ARGLU1Q9NWB6 273 aaPredicted RBP12.88□□□□□ -0.35
BEND3-202ENST00000429433 CUX2O14529 1486 aa12.88□□□□□ -0.35
BEND3-202ENST00000429433 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
BEND3-202ENST00000429433 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
BEND3-202ENST00000429433 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
BEND3-202ENST00000429433 IPO7O95373 1038 aaKnown RBP12.88□□□□□ -0.35
BEND3-202ENST00000429433 CREBRFQ8IUR6 639 aa12.87□□□□□ -0.35
BEND3-202ENST00000429433 TPD52L1Q16890 204 aaPredicted RBP12.87□□□□□ -0.35
BEND3-202ENST00000429433 FAM184AQ8NB25 1140 aa12.87□□□□□ -0.35
BEND3-202ENST00000429433 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
BEND3-202ENST00000429433 LRRFIP1Q32MZ4 808 aaKnown RBP12.87□□□□□ -0.35
BEND3-202ENST00000429433 CPLX2Q6PUV4 134 aaKnown RBP12.87□□□□□ -0.35
BEND3-202ENST00000429433 RUFY2Q8WXA3 655 aa12.87□□□□□ -0.35
BEND3-202ENST00000429433 DIAPH3Q9NSV4 1193 aa12.87□□□□□ -0.35
BEND3-202ENST00000429433 CDR1P51861 262 aa12.86□□□□□ -0.35
BEND3-202ENST00000429433 DHX57Q6P158 1386 aaKnown RBP12.86□□□□□ -0.35
BEND3-202ENST00000429433 NECTIN2Q92692 538 aa12.86□□□□□ -0.35
BEND3-202ENST00000429433 MRE11P49959 708 aa12.86□□□□□ -0.35
BEND3-202ENST00000429433 ANKRD20A12PQ8NF67 263 aa12.86□□□□□ -0.35
BEND3-202ENST00000429433 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
BEND3-202ENST00000429433 PANK3Q9H999 370 aa12.85□□□□□ -0.35
BEND3-202ENST00000429433 TAF7LQ5H9L4 462 aa12.85□□□□□ -0.35
BEND3-202ENST00000429433 PRKCSHP14314 528 aaPredicted RBP12.85□□□□□ -0.35
BEND3-202ENST00000429433 PRKRIP1Q9H875 184 aaPredicted RBP12.85□□□□□ -0.35
BEND3-202ENST00000429433 CARMIL2Q6F5E8 1435 aa12.85□□□□□ -0.35
BEND3-202ENST00000429433 DDX19BQ9UMR2 479 aa12.84□□□□□ -0.35
BEND3-202ENST00000429433 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
BEND3-202ENST00000429433 CALRP27797 417 aaKnown RBP12.84□□□□□ -0.35
BEND3-202ENST00000429433 FAM13BQ9NYF5 915 aa12.84□□□□□ -0.35
BEND3-202ENST00000429433 CCAR2Q8N163 923 aaKnown RBP12.83□□□□□ -0.35
BEND3-202ENST00000429433 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms