RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 PRKRIP1Q9H875 184 aaPredicted RBP17.94■□□□□ 0.46
STRC-201ENST00000428650 MLECQ14165 292 aa17.92■□□□□ 0.46
STRC-201ENST00000428650 STK26Q9P289 416 aa17.92■□□□□ 0.46
STRC-201ENST00000428650 MYOM3Q5VTT5 1437 aa17.91■□□□□ 0.46
STRC-201ENST00000428650 KIF3BO15066 747 aa17.91■□□□□ 0.46
STRC-201ENST00000428650 MFAP1P55081 439 aaKnown RBP17.91■□□□□ 0.46
STRC-201ENST00000428650 SPRYD3Q8NCJ5 442 aa17.9■□□□□ 0.46
STRC-201ENST00000428650 RRP1P56182 461 aaKnown RBP17.9■□□□□ 0.46
STRC-201ENST00000428650 USP47Q96K76 1375 aa17.9■□□□□ 0.46
STRC-201ENST00000428650 SLKQ9H2G2 1235 aaPredicted RBP17.9■□□□□ 0.46
STRC-201ENST00000428650 MIA2Q96PC5 1412 aa17.89■□□□□ 0.46
STRC-201ENST00000428650 SAFB2Q14151 953 aaKnown RBP eCLIP17.89■□□□□ 0.45
STRC-201ENST00000428650 HNRNPMP52272 730 aaKnown RBP eCLIP17.88■□□□□ 0.45
STRC-201ENST00000428650 ATP6V1DQ9Y5K8 247 aa17.87■□□□□ 0.45
STRC-201ENST00000428650 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
STRC-201ENST00000428650 ZKSCAN2Q63HK3 967 aa17.86■□□□□ 0.45
STRC-201ENST00000428650 EID1Q9Y6B2 187 aa17.85■□□□□ 0.45
STRC-201ENST00000428650 EVC2Q86UK5 1308 aa17.85■□□□□ 0.45
STRC-201ENST00000428650 PDE4AP27815 886 aa17.85■□□□□ 0.45
STRC-201ENST00000428650 VGFO15240 615 aaPredicted RBP17.84■□□□□ 0.45
STRC-201ENST00000428650 WASHC2CQ9Y4E1 1318 aa17.84■□□□□ 0.45
STRC-201ENST00000428650 ST20-MTHFSA0A0A6YYL1 179 aa17.84■□□□□ 0.45
STRC-201ENST00000428650 ROCK1Q13464 1354 aa17.84■□□□□ 0.45
STRC-201ENST00000428650 JPH4Q96JJ6 628 aa17.84■□□□□ 0.45
STRC-201ENST00000428650 PANK3Q9H999 370 aa17.84■□□□□ 0.45
STRC-201ENST00000428650 KIF16BQ96L93 1317 aa17.83■□□□□ 0.44
STRC-201ENST00000428650 KIF21BO75037 1637 aa17.83■□□□□ 0.44
STRC-201ENST00000428650 RSPH6AQ9H0K4 717 aa17.83■□□□□ 0.44
STRC-201ENST00000428650 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.44
STRC-201ENST00000428650 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
STRC-201ENST00000428650 TRIM6-TRIM34B2RNG4 842 aa17.82■□□□□ 0.44
STRC-201ENST00000428650 APBB1O00213 710 aa17.81■□□□□ 0.44
STRC-201ENST00000428650 DDX19BQ9UMR2 479 aa17.8■□□□□ 0.44
STRC-201ENST00000428650 CNTLNQ9NXG0 1405 aa17.8■□□□□ 0.44
STRC-201ENST00000428650 FYCO1Q9BQS8 1478 aa17.8■□□□□ 0.44
STRC-201ENST00000428650 SOX12O15370 315 aa17.8■□□□□ 0.44
STRC-201ENST00000428650 GZF1Q9H116 711 aaPredicted RBP17.8■□□□□ 0.44
STRC-201ENST00000428650 GORABQ5T7V8 394 aa17.79■□□□□ 0.44
STRC-201ENST00000428650 CCDC146Q8IYE0 955 aa17.79■□□□□ 0.44
STRC-201ENST00000428650 LRRFIP1Q32MZ4 808 aaKnown RBP17.77■□□□□ 0.44
STRC-201ENST00000428650 GSE1Q14687 1217 aa17.77■□□□□ 0.44
STRC-201ENST00000428650 HSP90B1P14625 803 aaKnown RBP17.77■□□□□ 0.44
STRC-201ENST00000428650 PTPRGP23470 1445 aa17.77■□□□□ 0.44
STRC-201ENST00000428650 CSB-PGBD3P0DP91 1061 aa17.77■□□□□ 0.43
STRC-201ENST00000428650 CCDC7Q96M83 1385 aa17.77■□□□□ 0.43
STRC-201ENST00000428650 CASKIN1Q8WXD9 1431 aa17.76■□□□□ 0.43
STRC-201ENST00000428650 API5Q9BZZ5 524 aaKnown RBP17.76■□□□□ 0.43
STRC-201ENST00000428650 REC8O95072 547 aa17.76■□□□□ 0.43
STRC-201ENST00000428650 PAK3O75914 559 aaPredicted RBP17.76■□□□□ 0.43
STRC-201ENST00000428650 LRRC9Q6ZRR7 1453 aa17.76■□□□□ 0.43
STRC-201ENST00000428650 AMPHP49418 695 aa17.75■□□□□ 0.43
STRC-201ENST00000428650 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
STRC-201ENST00000428650 BRD4O60885 1362 aaPredicted RBP17.75■□□□□ 0.43
STRC-201ENST00000428650 IGF1RP08069 1367 aa17.75■□□□□ 0.43
STRC-201ENST00000428650 RUFY2Q8WXA3 655 aa17.74■□□□□ 0.43
STRC-201ENST00000428650 GOLGA6L1Q8N7Z2 621 aa17.74■□□□□ 0.43
STRC-201ENST00000428650 CLUAP1Q96AJ1 413 aa17.74■□□□□ 0.43
STRC-201ENST00000428650 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
STRC-201ENST00000428650 NGDNQ8NEJ9 315 aaKnown RBP17.74■□□□□ 0.43
STRC-201ENST00000428650 TAF7LQ5H9L4 462 aa17.73■□□□□ 0.43
STRC-201ENST00000428650 COG3Q96JB2 828 aa17.73■□□□□ 0.43
STRC-201ENST00000428650 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
STRC-201ENST00000428650 FGD5Q6ZNL6 1462 aa17.72■□□□□ 0.43
STRC-201ENST00000428650 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
STRC-201ENST00000428650 CRBNQ96SW2 442 aa17.72■□□□□ 0.43
STRC-201ENST00000428650 EXOC6Q8TAG9 804 aa17.71■□□□□ 0.43
STRC-201ENST00000428650 SLC4A10Q6U841 1118 aa17.71■□□□□ 0.43
STRC-201ENST00000428650 CHMP5Q9NZZ3 219 aa17.71■□□□□ 0.43
STRC-201ENST00000428650 RRBP1Q9P2E9 1410 aaKnown RBP17.7■□□□□ 0.42
STRC-201ENST00000428650 RUNDC1Q96C34 613 aa17.7■□□□□ 0.42
STRC-201ENST00000428650 TRAK1Q9UPV9 953 aa17.7■□□□□ 0.42
STRC-201ENST00000428650 TMX4Q9H1E5 349 aaPredicted RBP17.69■□□□□ 0.42
STRC-201ENST00000428650 EFCAB5A4FU69 1503 aa17.69■□□□□ 0.42
STRC-201ENST00000428650 DDX49Q9Y6V7 483 aaKnown RBP17.69■□□□□ 0.42
STRC-201ENST00000428650 SCAPERQ9BY12 1400 aa17.69■□□□□ 0.42
STRC-201ENST00000428650 TPM3P06753 285 aa17.68■□□□□ 0.42
STRC-201ENST00000428650 ANKRD45Q5TZF3 282 aa17.68■□□□□ 0.42
STRC-201ENST00000428650 DZIP1LQ8IYY4 767 aaKnown RBP17.68■□□□□ 0.42
STRC-201ENST00000428650 TULP1O00294 542 aaPredicted RBP17.67■□□□□ 0.42
STRC-201ENST00000428650 DIAPH1O60610 1272 aaKnown RBP17.67■□□□□ 0.42
STRC-201ENST00000428650 NUCB2P80303 420 aa17.66■□□□□ 0.42
STRC-201ENST00000428650 SF3A1Q15459 793 aaKnown RBP17.66■□□□□ 0.42
STRC-201ENST00000428650 HSP90AB4PQ58FF6 505 aa17.65■□□□□ 0.42
STRC-201ENST00000428650 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.65■□□□□ 0.42
STRC-201ENST00000428650 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
STRC-201ENST00000428650 H3BQV1 296 aa17.64■□□□□ 0.42
STRC-201ENST00000428650 IFFO2Q5TF58 517 aa17.64■□□□□ 0.42
STRC-201ENST00000428650 GOLGA6L19H0YKK7 550 aa17.64■□□□□ 0.41
STRC-201ENST00000428650 NOC3LQ8WTT2 800 aaKnown RBP17.64■□□□□ 0.41
STRC-201ENST00000428650 NINLQ9Y2I6 1382 aa17.64■□□□□ 0.41
STRC-201ENST00000428650 KIF7Q2M1P5 1343 aa17.64■□□□□ 0.41
STRC-201ENST00000428650 GNAI1P63096 354 aa17.64■□□□□ 0.41
STRC-201ENST00000428650 CPLX2Q6PUV4 134 aaKnown RBP17.64■□□□□ 0.41
STRC-201ENST00000428650 CHMP3Q9Y3E7 222 aa17.64■□□□□ 0.41
STRC-201ENST00000428650 ZKSCAN1P17029 563 aaPredicted RBP17.63■□□□□ 0.41
STRC-201ENST00000428650 FAM184AQ8NB25 1140 aa17.63■□□□□ 0.41
STRC-201ENST00000428650 NCOA2Q15596 1464 aa17.63■□□□□ 0.41
STRC-201ENST00000428650 APAF1O14727 1248 aa17.62■□□□□ 0.41
STRC-201ENST00000428650 DIAPH3Q9NSV4 1193 aa17.62■□□□□ 0.41
STRC-201ENST00000428650 HFM1A2PYH4 1435 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms