RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 PLXNC1O60486 1568 aa10.71□□□□□ -0.7
LRCH3-204ENST00000428136 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
LRCH3-204ENST00000428136 GPRASP1Q5JY77 1395 aa10.7□□□□□ -0.7
LRCH3-204ENST00000428136 MSH5O43196 834 aa10.7□□□□□ -0.7
LRCH3-204ENST00000428136 CARD11Q9BXL7 1154 aa10.7□□□□□ -0.7
LRCH3-204ENST00000428136 BRD4O60885 1362 aaPredicted RBP10.7□□□□□ -0.7
LRCH3-204ENST00000428136 PRAG1Q86YV5 1406 aa10.7□□□□□ -0.7
LRCH3-204ENST00000428136 ATP10AO60312 1499 aa10.69□□□□□ -0.7
LRCH3-204ENST00000428136 IQGAP3Q86VI3 1631 aa10.69□□□□□ -0.7
LRCH3-204ENST00000428136 HNRNPMP52272 730 aaKnown RBP eCLIP10.69□□□□□ -0.7
LRCH3-204ENST00000428136 PLA2R1Q13018 1463 aa10.69□□□□□ -0.7
LRCH3-204ENST00000428136 MAGI2Q86UL8 1455 aa10.69□□□□□ -0.7
LRCH3-204ENST00000428136 RALBP1Q15311 655 aa10.68□□□□□ -0.7
LRCH3-204ENST00000428136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.68□□□□□ -0.7
LRCH3-204ENST00000428136 TTC37Q6PGP7 1564 aa10.67□□□□□ -0.7
LRCH3-204ENST00000428136 PLEKHH2Q8IVE3 1493 aa10.67□□□□□ -0.7
LRCH3-204ENST00000428136 MYBBP1AQ9BQG0 1328 aaKnown RBP10.67□□□□□ -0.7
LRCH3-204ENST00000428136 ST20-MTHFSA0A0A6YYL1 179 aa10.67□□□□□ -0.7
LRCH3-204ENST00000428136 INSRP06213 1382 aa10.66□□□□□ -0.7
LRCH3-204ENST00000428136 PRDM15P57071 1507 aaPredicted RBP10.66□□□□□ -0.7
LRCH3-204ENST00000428136 ZMYM4Q5VZL5 1548 aa10.66□□□□□ -0.7
LRCH3-204ENST00000428136 SYCP2Q9BX26 1530 aa10.66□□□□□ -0.7
LRCH3-204ENST00000428136 ZNF326Q5BKZ1 582 aaKnown RBP10.66□□□□□ -0.7
LRCH3-204ENST00000428136 DCAF11Q8TEB1 546 aa10.65□□□□□ -0.7
LRCH3-204ENST00000428136 PARD3Q8TEW0 1356 aa10.65□□□□□ -0.7
LRCH3-204ENST00000428136 MYO5CQ9NQX4 1742 aa10.65□□□□□ -0.7
LRCH3-204ENST00000428136 CCDC144AA2RUR9 1427 aa10.65□□□□□ -0.7
LRCH3-204ENST00000428136 EIF2AK4Q9P2K8 1649 aaKnown RBP10.65□□□□□ -0.7
LRCH3-204ENST00000428136 CHD1O14646 1710 aa10.65□□□□□ -0.71
LRCH3-204ENST00000428136 A2MP01023 1474 aa10.65□□□□□ -0.71
LRCH3-204ENST00000428136 ABCC2Q92887 1545 aa10.64□□□□□ -0.71
LRCH3-204ENST00000428136 DUOX2Q9NRD8 1548 aa10.64□□□□□ -0.71
LRCH3-204ENST00000428136 WASHC2CQ9Y4E1 1318 aa10.64□□□□□ -0.71
LRCH3-204ENST00000428136 B4GALNT3Q6L9W6 998 aa10.64□□□□□ -0.71
LRCH3-204ENST00000428136 COL17A1Q9UMD9 1497 aaPredicted RBP10.64□□□□□ -0.71
LRCH3-204ENST00000428136 ERBINQ96RT1 1412 aa10.63□□□□□ -0.71
LRCH3-204ENST00000428136 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
LRCH3-204ENST00000428136 ARHGAP5Q13017 1502 aa10.63□□□□□ -0.71
LRCH3-204ENST00000428136 PER1O15534 1290 aaPredicted RBP10.63□□□□□ -0.71
LRCH3-204ENST00000428136 RNF17Q9BXT8 1623 aaKnown RBP10.62□□□□□ -0.71
LRCH3-204ENST00000428136 KDM2AQ9Y2K7 1162 aa10.62□□□□□ -0.71
LRCH3-204ENST00000428136 TESK2Q96S53 571 aa10.6□□□□□ -0.71
LRCH3-204ENST00000428136 PLCH2O75038 1416 aa10.6□□□□□ -0.71
LRCH3-204ENST00000428136 UHRF1BP1LA0JNW5 1464 aa10.6□□□□□ -0.71
LRCH3-204ENST00000428136 NLRP13Q86W25 1043 aa10.6□□□□□ -0.71
LRCH3-204ENST00000428136 POLR3GLQ9BT43 218 aa10.6□□□□□ -0.71
LRCH3-204ENST00000428136 PDE3BQ13370 1112 aa10.59□□□□□ -0.71
LRCH3-204ENST00000428136 ABCC1P33527 1531 aa10.58□□□□□ -0.72
LRCH3-204ENST00000428136 ARAP3Q8WWN8 1544 aa10.58□□□□□ -0.72
LRCH3-204ENST00000428136 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
LRCH3-204ENST00000428136 BLMP54132 1417 aaPredicted RBP10.57□□□□□ -0.72
LRCH3-204ENST00000428136 ERCC6L2Q5T890 1561 aa10.57□□□□□ -0.72
LRCH3-204ENST00000428136 ZCCHC11Q5TAX3 1644 aaKnown RBP10.56□□□□□ -0.72
LRCH3-204ENST00000428136 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
LRCH3-204ENST00000428136 IQGAP1P46940 1657 aa10.56□□□□□ -0.72
LRCH3-204ENST00000428136 RTEL1-TNFRSF6BF6WH68 1400 aa10.56□□□□□ -0.72
LRCH3-204ENST00000428136 MADDQ8WXG6 1647 aa10.55□□□□□ -0.72
LRCH3-204ENST00000428136 NEURL4Q96JN8 1562 aa10.55□□□□□ -0.72
LRCH3-204ENST00000428136 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
LRCH3-204ENST00000428136 DEPDC5O75140 1603 aa10.55□□□□□ -0.72
LRCH3-204ENST00000428136 PTPRTO14522 1441 aa10.54□□□□□ -0.72
LRCH3-204ENST00000428136 TRPM2O94759 1503 aa10.54□□□□□ -0.72
LRCH3-204ENST00000428136 RRP1P56182 461 aaKnown RBP10.54□□□□□ -0.72
LRCH3-204ENST00000428136 CCDC136Q96JN2 1154 aa10.54□□□□□ -0.72
LRCH3-204ENST00000428136 STAC3Q96MF2 364 aa10.54□□□□□ -0.72
LRCH3-204ENST00000428136 CEP152O94986 1710 aa10.53□□□□□ -0.72
LRCH3-204ENST00000428136 SPHKAPQ2M3C7 1700 aa10.53□□□□□ -0.72
LRCH3-204ENST00000428136 SCAPERQ9BY12 1400 aa10.53□□□□□ -0.72
LRCH3-204ENST00000428136 WDR7Q9Y4E6 1490 aa10.52□□□□□ -0.73
LRCH3-204ENST00000428136 MYT1LQ9UL68 1186 aa10.52□□□□□ -0.73
LRCH3-204ENST00000428136 VWDEQ8N2E2 1590 aa10.52□□□□□ -0.73
LRCH3-204ENST00000428136 TMF1P82094 1093 aa10.52□□□□□ -0.73
LRCH3-204ENST00000428136 RGL3Q3MIN7 710 aa10.52□□□□□ -0.73
LRCH3-204ENST00000428136 EFCAB2Q5VUJ9 269 aa10.52□□□□□ -0.73
LRCH3-204ENST00000428136 RCAN3Q9UKA8 241 aa10.52□□□□□ -0.73
LRCH3-204ENST00000428136 KIAA1210Q9ULL0 1709 aa10.51□□□□□ -0.73
LRCH3-204ENST00000428136 TRAPPC8Q9Y2L5 1435 aa10.51□□□□□ -0.73
LRCH3-204ENST00000428136 CNGB1Q14028 1251 aaPredicted RBP10.51□□□□□ -0.73
LRCH3-204ENST00000428136 ZFYVE16Q7Z3T8 1539 aa10.51□□□□□ -0.73
LRCH3-204ENST00000428136 PANK3Q9H999 370 aa10.5□□□□□ -0.73
LRCH3-204ENST00000428136 SYNMO15061 1565 aa10.5□□□□□ -0.73
LRCH3-204ENST00000428136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.5□□□□□ -0.731e-7■■□□□ 14.2
LRCH3-204ENST00000428136 TET3O43151 1660 aa10.5□□□□□ -0.73
LRCH3-204ENST00000428136 CLTCL1P53675 1640 aa10.48□□□□□ -0.73
LRCH3-204ENST00000428136 ERICH6Q7L0X2 663 aa10.48□□□□□ -0.73
LRCH3-204ENST00000428136 NPC1L1Q9UHC9 1359 aa10.48□□□□□ -0.73
LRCH3-204ENST00000428136 INO80Q9ULG1 1556 aaPredicted RBP10.48□□□□□ -0.73
LRCH3-204ENST00000428136 SCAF11Q99590 1463 aaKnown RBP10.48□□□□□ -0.73
LRCH3-204ENST00000428136 ABCA9Q8IUA7 1624 aa10.48□□□□□ -0.73
LRCH3-204ENST00000428136 NOP58Q9Y2X3 529 aaKnown RBP10.47□□□□□ -0.73
LRCH3-204ENST00000428136 MYOM1P52179 1685 aa10.47□□□□□ -0.73
LRCH3-204ENST00000428136 EXOC6Q8TAG9 804 aa10.47□□□□□ -0.73
LRCH3-204ENST00000428136 TCERG1O14776 1098 aaKnown RBP10.46□□□□□ -0.73
LRCH3-204ENST00000428136 IPO9Q96P70 1041 aaKnown RBP10.46□□□□□ -0.73
LRCH3-204ENST00000428136 MS4A1P11836 297 aa10.45□□□□□ -0.74
LRCH3-204ENST00000428136 CC2D1BQ5T0F9 858 aaKnown RBP10.45□□□□□ -0.74
LRCH3-204ENST00000428136 PIK3C2GO75747 1445 aa10.45□□□□□ -0.74
LRCH3-204ENST00000428136 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
LRCH3-204ENST00000428136 CDCA7LQ96GN5 454 aa10.45□□□□□ -0.74
LRCH3-204ENST00000428136 SPAG9O60271 1321 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms