RNA–Protein interactions for RNA: ENST00000427529.1

EFCAB2-206, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 3

Gene EFCAB2, Length 325 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-206ENST00000427529 COL9A1P20849 921 aa8.53□□□□□ -1.04
EFCAB2-206ENST00000427529 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
EFCAB2-206ENST00000427529 CCDC180Q9P1Z9 1646 aa8.52□□□□□ -1.05
EFCAB2-206ENST00000427529 BBXQ8WY36 941 aaPredicted RBP8.52□□□□□ -1.05
EFCAB2-206ENST00000427529 RABGEF1Q9UJ41 708 aa8.52□□□□□ -1.05
EFCAB2-206ENST00000427529 ANKK1Q8NFD2 765 aa8.51□□□□□ -1.05
EFCAB2-206ENST00000427529 DDX12PQ92771 950 aa8.5□□□□□ -1.05
EFCAB2-206ENST00000427529 EPAS1Q99814 870 aa8.5□□□□□ -1.05
EFCAB2-206ENST00000427529 KIAA1468Q9P260 1216 aa8.5□□□□□ -1.05
EFCAB2-206ENST00000427529 C6orf132Q5T0Z8 1188 aa8.49□□□□□ -1.05
EFCAB2-206ENST00000427529 CAMK2BQ13554 666 aa8.48□□□□□ -1.05
EFCAB2-206ENST00000427529 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.48□□□□□ -1.05
EFCAB2-206ENST00000427529 BCAMP50895 628 aa8.47□□□□□ -1.05
EFCAB2-206ENST00000427529 SPRYD3Q8NCJ5 442 aa8.47□□□□□ -1.05
EFCAB2-206ENST00000427529 SEPT9Q9UHD8 586 aaPredicted RBP8.46□□□□□ -1.06
EFCAB2-206ENST00000427529 MAP3K7O43318 606 aa8.44□□□□□ -1.06
EFCAB2-206ENST00000427529 NBR1Q14596 966 aa8.44□□□□□ -1.06
EFCAB2-206ENST00000427529 LAPTM4BQ86VI4 370 aa8.44□□□□□ -1.06
EFCAB2-206ENST00000427529 ZFRQ96KR1 1074 aaKnown RBP8.44□□□□□ -1.06
EFCAB2-206ENST00000427529 CFAP44Q96MT7 982 aa8.43□□□□□ -1.06
EFCAB2-206ENST00000427529 SOWAHBA6NEL2 793 aa8.42□□□□□ -1.06
EFCAB2-206ENST00000427529 TRIM6-TRIM34B2RNG4 842 aa8.42□□□□□ -1.06
EFCAB2-206ENST00000427529 WDR70Q9NW82 654 aa8.42□□□□□ -1.06
EFCAB2-206ENST00000427529 A0A0G2JS52 829 aa8.41□□□□□ -1.06
EFCAB2-206ENST00000427529 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
EFCAB2-206ENST00000427529 PAXIP1Q6ZW49 1069 aaPredicted RBP8.41□□□□□ -1.06
EFCAB2-206ENST00000427529 ONECUT3O60422 494 aaPredicted RBP8.4□□□□□ -1.06
EFCAB2-206ENST00000427529 TSR1Q2NL82 804 aaKnown RBP8.4□□□□□ -1.06
EFCAB2-206ENST00000427529 PACS2Q86VP3 889 aa8.4□□□□□ -1.06
EFCAB2-206ENST00000427529 WBP1LQ9NX94 342 aa8.4□□□□□ -1.06
EFCAB2-206ENST00000427529 GRXCR2A6NFK2 248 aa8.39□□□□□ -1.07
EFCAB2-206ENST00000427529 FAM98CQ17RN3 349 aaKnown RBP8.39□□□□□ -1.07
EFCAB2-206ENST00000427529 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.39□□□□□ -1.07
EFCAB2-206ENST00000427529 SPDYE16A6NNV3 312 aaPredicted RBP8.38□□□□□ -1.07
EFCAB2-206ENST00000427529 RGS20O76081 388 aa8.38□□□□□ -1.07
EFCAB2-206ENST00000427529 EN1Q05925 392 aaPredicted RBP8.38□□□□□ -1.07
EFCAB2-206ENST00000427529 PDIA6Q15084 440 aa8.38□□□□□ -1.07
EFCAB2-206ENST00000427529 E2F4Q16254 413 aa8.38□□□□□ -1.07
EFCAB2-206ENST00000427529 LRCH3Q96II8 777 aa8.38□□□□□ -1.07
EFCAB2-206ENST00000427529 IRX2Q9BZI1 471 aaPredicted RBP8.38□□□□□ -1.07
EFCAB2-206ENST00000427529 HPS5Q9UPZ3 1129 aa8.38□□□□□ -1.07
EFCAB2-206ENST00000427529 AMER1Q5JTC6 1135 aaPredicted RBP8.37□□□□□ -1.07
EFCAB2-206ENST00000427529 NYAP1Q6ZVC0 841 aa8.37□□□□□ -1.07
EFCAB2-206ENST00000427529 TSR3Q9UJK0 312 aaKnown RBP8.36□□□□□ -1.07
EFCAB2-206ENST00000427529 KCNC4Q03721 635 aa8.35□□□□□ -1.07
EFCAB2-206ENST00000427529 SMAPO00193 183 aa8.34□□□□□ -1.07
EFCAB2-206ENST00000427529 TSKSQ9UJT2 592 aa8.34□□□□□ -1.07
EFCAB2-206ENST00000427529 ITGBL1O95965 494 aaPredicted RBP8.33□□□□□ -1.08
EFCAB2-206ENST00000427529 PPP4CP60510 307 aa8.33□□□□□ -1.08
EFCAB2-206ENST00000427529 CDCA7LQ96GN5 454 aa8.33□□□□□ -1.08
EFCAB2-206ENST00000427529 RTN4Q9NQC3 1192 aaKnown RBP8.32□□□□□ -1.08
EFCAB2-206ENST00000427529 PRSS12P56730 875 aa8.31□□□□□ -1.08
EFCAB2-206ENST00000427529 RNF40O75150 1001 aa8.3□□□□□ -1.08
EFCAB2-206ENST00000427529 SAMD7Q7Z3H4 446 aa8.3□□□□□ -1.08
EFCAB2-206ENST00000427529 PNMA3Q9UL41 463 aa8.3□□□□□ -1.08
EFCAB2-206ENST00000427529 HDGFP51858 240 aaKnown RBP8.29□□□□□ -1.08
EFCAB2-206ENST00000427529 CERKQ8TCT0 537 aa8.29□□□□□ -1.08
EFCAB2-206ENST00000427529 NBPF26B4DH59 902 aa8.28□□□□□ -1.08
EFCAB2-206ENST00000427529 PRIM1P49642 420 aaKnown RBP8.28□□□□□ -1.08
EFCAB2-206ENST00000427529 TATDN2Q93075 761 aa8.27□□□□□ -1.09
EFCAB2-206ENST00000427529 FAM198AQ9UFP1 575 aa8.27□□□□□ -1.09
EFCAB2-206ENST00000427529 CDHR5Q9HBB8 845 aa8.26□□□□□ -1.09
EFCAB2-206ENST00000427529 OSBPP22059 807 aa8.25□□□□□ -1.09
EFCAB2-206ENST00000427529 NUDT18Q6ZVK8 323 aa8.25□□□□□ -1.09
EFCAB2-206ENST00000427529 ARIH1Q9Y4X5 557 aaPredicted RBP8.24□□□□□ -1.09
EFCAB2-206ENST00000427529 C3orf80F5H4A9 247 aa8.23□□□□□ -1.09
EFCAB2-206ENST00000427529 Q6ZNB5 142 aa8.23□□□□□ -1.09
EFCAB2-206ENST00000427529 MTRQ99707 1265 aa8.21□□□□□ -1.1
EFCAB2-206ENST00000427529 TJAP1Q5JTD0 557 aa8.2□□□□□ -1.1
EFCAB2-206ENST00000427529 PADI6Q6TGC4 694 aa8.2□□□□□ -1.1
EFCAB2-206ENST00000427529 IL21Q9HBE4 155 aa8.19□□□□□ -1.1
EFCAB2-206ENST00000427529 SLC4A3P48751 1232 aa8.18□□□□□ -1.1
EFCAB2-206ENST00000427529 RB1CC1Q8TDY2 1594 aa8.18□□□□□ -1.1
EFCAB2-206ENST00000427529 SWT1Q5T5J6 900 aaKnown RBP8.17□□□□□ -1.1
EFCAB2-206ENST00000427529 RBM27Q9P2N5 1060 aaKnown RBP8.17□□□□□ -1.1
EFCAB2-206ENST00000427529 APLP1P51693 650 aa8.16□□□□□ -1.1
EFCAB2-206ENST00000427529 SLF2Q8IX21 1173 aa8.16□□□□□ -1.1
EFCAB2-206ENST00000427529 ZNF516Q92618 1163 aa8.16□□□□□ -1.1
EFCAB2-206ENST00000427529 PRKD2Q9BZL6 878 aa8.16□□□□□ -1.1
EFCAB2-206ENST00000427529 TSHZ2Q9NRE2 1034 aa8.16□□□□□ -1.1
EFCAB2-206ENST00000427529 GFRA3O60609 400 aa8.15□□□□□ -1.1
EFCAB2-206ENST00000427529 COPS2P61201 443 aa8.15□□□□□ -1.1
EFCAB2-206ENST00000427529 PPP1R18Q6NYC8 613 aa8.15□□□□□ -1.1
EFCAB2-206ENST00000427529 NECTIN2Q92692 538 aa8.15□□□□□ -1.1
EFCAB2-206ENST00000427529 NPDC1Q9NQX5 325 aaPredicted RBP8.15□□□□□ -1.1
EFCAB2-206ENST00000427529 MLLT3P42568 568 aaPredicted RBP8.14□□□□□ -1.11
EFCAB2-206ENST00000427529 ARHGEF1Q92888 912 aaKnown RBP8.13□□□□□ -1.11
EFCAB2-206ENST00000427529 LAPTM4AQ15012 233 aa8.12□□□□□ -1.11
EFCAB2-206ENST00000427529 TTC13Q8NBP0 860 aa8.12□□□□□ -1.11
EFCAB2-206ENST00000427529 NKX2-3Q8TAU0 364 aa8.12□□□□□ -1.11
EFCAB2-206ENST00000427529 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.12□□□□□ -1.11
EFCAB2-206ENST00000427529 NUTM2FA1L443 756 aa8.11□□□□□ -1.11
EFCAB2-206ENST00000427529 GGCXP38435 758 aa8.11□□□□□ -1.11
EFCAB2-206ENST00000427529 KCNV2Q8TDN2 545 aa8.11□□□□□ -1.11
EFCAB2-206ENST00000427529 EYA1Q99502 592 aa8.09□□□□□ -1.11
EFCAB2-206ENST00000427529 RBM46Q8TBY0 533 aaKnown RBP8.08□□□□□ -1.12
EFCAB2-206ENST00000427529 PRR14Q9BWN1 585 aa8.08□□□□□ -1.12
EFCAB2-206ENST00000427529 PCDHB3Q9Y5E6 796 aa8.08□□□□□ -1.12
EFCAB2-206ENST00000427529 NACADO15069 1562 aa8.08□□□□□ -1.12
EFCAB2-206ENST00000427529 TRAF7Q6Q0C0 670 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms