RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 KIF7Q2M1P5 1343 aa24.91■■□□□ 1.58
HCG18-235ENST00000426882 NCOA2Q15596 1464 aa24.88■■□□□ 1.57
HCG18-235ENST00000426882 MFAP1P55081 439 aaKnown RBP24.87■■□□□ 1.57
HCG18-235ENST00000426882 PAK3O75914 559 aaPredicted RBP24.85■■□□□ 1.57
HCG18-235ENST00000426882 TAOK2Q9UL54 1235 aa24.84■■□□□ 1.57
HCG18-235ENST00000426882 TRHP20396 242 aaPredicted RBP24.83■■□□□ 1.57
HCG18-235ENST00000426882 PDE4AP27815 886 aa24.83■■□□□ 1.57
HCG18-235ENST00000426882 NAP1L2Q9ULW6 460 aaPredicted RBP24.83■■□□□ 1.57
HCG18-235ENST00000426882 FYCO1Q9BQS8 1478 aa24.83■■□□□ 1.56
HCG18-235ENST00000426882 PRXQ9BXM0 1461 aa24.83■■□□□ 1.56
HCG18-235ENST00000426882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.83■■□□□ 1.561e-6■■■■□ 21.3
HCG18-235ENST00000426882 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.56
HCG18-235ENST00000426882 CFTRP13569 1480 aa24.82■■□□□ 1.56
HCG18-235ENST00000426882 WASHC2AQ641Q2 1341 aa24.82■■□□□ 1.56
HCG18-235ENST00000426882 CENPQQ7L2Z9 268 aaPredicted RBP24.82■■□□□ 1.56
HCG18-235ENST00000426882 CRBNQ96SW2 442 aa24.82■■□□□ 1.56
HCG18-235ENST00000426882 GBP4Q96PP9 640 aa24.81■■□□□ 1.56
HCG18-235ENST00000426882 CNTLNQ9NXG0 1405 aa24.81■■□□□ 1.56
HCG18-235ENST00000426882 APAF1O14727 1248 aa24.8■■□□□ 1.56
HCG18-235ENST00000426882 BCL2L13Q9BXK5 485 aa24.8■■□□□ 1.56
HCG18-235ENST00000426882 GZF1Q9H116 711 aaPredicted RBP24.8■■□□□ 1.56
HCG18-235ENST00000426882 E9PSI1 815 aa24.8■■□□□ 1.56
HCG18-235ENST00000426882 GOLGA6L4A6NEF3 574 aa24.8■■□□□ 1.56
HCG18-235ENST00000426882 STK31Q9BXU1 1019 aa24.79■■□□□ 1.56
HCG18-235ENST00000426882 ANKRD50Q9ULJ7 1429 aa24.78■■□□□ 1.56
HCG18-235ENST00000426882 CGNL1Q0VF96 1302 aa24.77■■□□□ 1.56
HCG18-235ENST00000426882 VGFO15240 615 aaPredicted RBP24.77■■□□□ 1.56
HCG18-235ENST00000426882 KIAA1211Q6ZU35 1233 aa24.76■■□□□ 1.55
HCG18-235ENST00000426882 LMOD3Q0VAK6 560 aa24.75■■□□□ 1.55
HCG18-235ENST00000426882 EVC2Q86UK5 1308 aa24.74■■□□□ 1.55
HCG18-235ENST00000426882 FAM161AQ3B820 660 aa24.74■■□□□ 1.55
HCG18-235ENST00000426882 CDK11BP21127 795 aaKnown RBP24.72■■□□□ 1.55
HCG18-235ENST00000426882 COG6Q9Y2V7 657 aa24.72■■□□□ 1.55
HCG18-235ENST00000426882 NUTM2FA1L443 756 aa24.72■■□□□ 1.55
HCG18-235ENST00000426882 HMMRO75330 724 aa24.72■■□□□ 1.55
HCG18-235ENST00000426882 SLC4A10Q6U841 1118 aa24.72■■□□□ 1.55
HCG18-235ENST00000426882 NGDNQ8NEJ9 315 aaKnown RBP24.7■■□□□ 1.55
HCG18-235ENST00000426882 MSNP26038 577 aaKnown RBP24.7■■□□□ 1.54
HCG18-235ENST00000426882 TOP2BQ02880 1626 aa24.7■■□□□ 1.54
HCG18-235ENST00000426882 FANCIQ9NVI1 1328 aa24.69■■□□□ 1.54
HCG18-235ENST00000426882 ELL2O00472 640 aaPredicted RBP24.69■■□□□ 1.54
HCG18-235ENST00000426882 ZKSCAN2Q63HK3 967 aa24.69■■□□□ 1.54
HCG18-235ENST00000426882 PTMSP20962 102 aa24.68■■□□□ 1.54
HCG18-235ENST00000426882 CHMP4AQ9BY43 222 aa24.67■■□□□ 1.54
HCG18-235ENST00000426882 EID1Q9Y6B2 187 aa24.67■■□□□ 1.54
HCG18-235ENST00000426882 SLC4A3P48751 1232 aa24.67■■□□□ 1.54
HCG18-235ENST00000426882 AMPHP49418 695 aa24.67■■□□□ 1.54
HCG18-235ENST00000426882 MINK1Q8N4C8 1332 aaPredicted RBP24.66■■□□□ 1.54
HCG18-235ENST00000426882 MIA2Q96PC5 1412 aa24.66■■□□□ 1.54
HCG18-235ENST00000426882 PRDM2Q13029 1718 aa24.65■■□□□ 1.54
HCG18-235ENST00000426882 TRIM6-TRIM34B2RNG4 842 aa24.64■■□□□ 1.53
HCG18-235ENST00000426882 CSB-PGBD3P0DP91 1061 aa24.63■■□□□ 1.53
HCG18-235ENST00000426882 NGEFQ8N5V2 710 aa24.63■■□□□ 1.53
HCG18-235ENST00000426882 NPHP1O15259 732 aa24.63■■□□□ 1.53
HCG18-235ENST00000426882 GRIN2BQ13224 1484 aa24.63■■□□□ 1.53
HCG18-235ENST00000426882 GOLGA6L6A8MZA4 724 aa24.62■■□□□ 1.53
HCG18-235ENST00000426882 STAC3Q96MF2 364 aa24.62■■□□□ 1.53
HCG18-235ENST00000426882 FOXD4L1Q9NU39 408 aa24.62■■□□□ 1.53
HCG18-235ENST00000426882 LTV1Q96GA3 475 aaPredicted RBP24.61■■□□□ 1.53
HCG18-235ENST00000426882 USP35Q9P2H5 1018 aa24.61■■□□□ 1.53
HCG18-235ENST00000426882 EFCAB5A4FU69 1503 aa24.61■■□□□ 1.53
HCG18-235ENST00000426882 GOLGA6L3A6NEY3 463 aa24.61■■□□□ 1.53
HCG18-235ENST00000426882 NRDCO43847 1150 aa24.6■■□□□ 1.53
HCG18-235ENST00000426882 COG3Q96JB2 828 aa24.59■■□□□ 1.53
HCG18-235ENST00000426882 HFM1A2PYH4 1435 aa24.59■■□□□ 1.53
HCG18-235ENST00000426882 NBPF8Q3BBV2 869 aa24.59■■□□□ 1.53
HCG18-235ENST00000426882 BRD4O60885 1362 aaPredicted RBP24.59■■□□□ 1.53
HCG18-235ENST00000426882 TIAM1Q13009 1591 aa24.58■■□□□ 1.53
HCG18-235ENST00000426882 NESP48681 1621 aa24.58■■□□□ 1.53
HCG18-235ENST00000426882 ANKRD45Q5TZF3 282 aa24.57■■□□□ 1.52
HCG18-235ENST00000426882 HDAC5Q9UQL6 1122 aa24.55■■□□□ 1.52
HCG18-235ENST00000426882 DIAPH1O60610 1272 aaKnown RBP24.55■■□□□ 1.52
HCG18-235ENST00000426882 ZNF330Q9Y3S2 320 aaPredicted RBP24.55■■□□□ 1.52
HCG18-235ENST00000426882 RUNDC1Q96C34 613 aa24.54■■□□□ 1.52
HCG18-235ENST00000426882 CHAF1AQ13111 956 aaPredicted RBP24.54■■□□□ 1.52
HCG18-235ENST00000426882 ADAMTS8Q9UP79 889 aa24.53■■□□□ 1.52
HCG18-235ENST00000426882 DRC7Q8IY82 874 aa24.53■■□□□ 1.52
HCG18-235ENST00000426882 POLA1P09884 1462 aaPredicted RBP24.52■■□□□ 1.52
HCG18-235ENST00000426882 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
HCG18-235ENST00000426882 NOL8Q76FK4 1167 aaKnown RBP24.52■■□□□ 1.52
HCG18-235ENST00000426882 EHBP1L1Q8N3D4 1523 aa24.52■■□□□ 1.52
HCG18-235ENST00000426882 RIPK4P57078 832 aa24.52■■□□□ 1.52
HCG18-235ENST00000426882 DZIP1LQ8IYY4 767 aaKnown RBP24.52■■□□□ 1.52
HCG18-235ENST00000426882 DDX19BQ9UMR2 479 aa24.51■■□□□ 1.51
HCG18-235ENST00000426882 AFAP1Q8N556 730 aa24.51■■□□□ 1.51
HCG18-235ENST00000426882 GPATCH3Q96I76 525 aa24.51■■□□□ 1.51
HCG18-235ENST00000426882 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
HCG18-235ENST00000426882 SYAP1Q96A49 352 aaPredicted RBP24.51■■□□□ 1.51
HCG18-235ENST00000426882 ST18O60284 1047 aa24.5■■□□□ 1.51
HCG18-235ENST00000426882 NBPF1Q3BBV0 1214 aa24.5■■□□□ 1.51
HCG18-235ENST00000426882 CDCA7LQ96GN5 454 aa24.5■■□□□ 1.51
HCG18-235ENST00000426882 KIAA1107Q9UPP5 1409 aa24.48■■□□□ 1.51
HCG18-235ENST00000426882 CYB5RLQ6IPT4 315 aa24.47■■□□□ 1.51
HCG18-235ENST00000426882 CHMP3Q9Y3E7 222 aa24.46■■□□□ 1.51
HCG18-235ENST00000426882 CFAP70Q5T0N1 1121 aa24.46■■□□□ 1.51
HCG18-235ENST00000426882 TMEM132EQ6IEE7 984 aa24.46■■□□□ 1.51
HCG18-235ENST00000426882 OSCARQ8IYS5 282 aa24.46■■□□□ 1.51
HCG18-235ENST00000426882 PRG4Q92954 1404 aaPredicted RBP24.45■■□□□ 1.51
HCG18-235ENST00000426882 GNL2Q13823 731 aaKnown RBP24.45■■□□□ 1.5
HCG18-235ENST00000426882 WDR97A6NE52 1622 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms