RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 MAP3K7O43318 606 aa13.95□□□□□ -0.18
LINC01953-201ENST00000426870 SPNS2Q8IVW8 549 aa13.93□□□□□ -0.18
LINC01953-201ENST00000426870 TK2O00142 265 aa13.92□□□□□ -0.18
LINC01953-201ENST00000426870 EN1Q05925 392 aaPredicted RBP13.92□□□□□ -0.18
LINC01953-201ENST00000426870 STAC3Q96MF2 364 aa13.92□□□□□ -0.18
LINC01953-201ENST00000426870 PPP1R3GB7ZBB8 358 aa13.91□□□□□ -0.18
LINC01953-201ENST00000426870 C6orf132Q5T0Z8 1188 aa13.91□□□□□ -0.18
LINC01953-201ENST00000426870 DMRTA1Q5VZB9 504 aa13.91□□□□□ -0.18
LINC01953-201ENST00000426870 ADGRD1Q6QNK2 874 aa13.9□□□□□ -0.18
LINC01953-201ENST00000426870 SMYD5Q6GMV2 418 aa13.89□□□□□ -0.19
LINC01953-201ENST00000426870 SEMA3EO15041 775 aa13.86□□□□□ -0.19
LINC01953-201ENST00000426870 OSBPP22059 807 aa13.86□□□□□ -0.19
LINC01953-201ENST00000426870 SLC4A5Q9BY07 1137 aa13.86□□□□□ -0.19
LINC01953-201ENST00000426870 MLLT3P42568 568 aaPredicted RBP13.85□□□□□ -0.19
LINC01953-201ENST00000426870 CERKQ8TCT0 537 aa13.83□□□□□ -0.2
LINC01953-201ENST00000426870 ZBED2Q9BTP6 218 aa13.83□□□□□ -0.2
LINC01953-201ENST00000426870 VPS9D1Q9Y2B5 631 aa13.83□□□□□ -0.2
LINC01953-201ENST00000426870 TULP1O00294 542 aaPredicted RBP13.82□□□□□ -0.2
LINC01953-201ENST00000426870 TSR1Q2NL82 804 aaKnown RBP13.82□□□□□ -0.2
LINC01953-201ENST00000426870 MYT1LQ9UL68 1186 aa13.82□□□□□ -0.2
LINC01953-201ENST00000426870 COL9A1P20849 921 aa13.81□□□□□ -0.2
LINC01953-201ENST00000426870 MMRN1Q13201 1228 aa13.81□□□□□ -0.2
LINC01953-201ENST00000426870 NBPF3Q9H094 633 aa13.79□□□□□ -0.2
LINC01953-201ENST00000426870 TESPA1A2RU30 521 aaPredicted RBP13.78□□□□□ -0.2
LINC01953-201ENST00000426870 SLC24A1O60721 1099 aa13.78□□□□□ -0.2
LINC01953-201ENST00000426870 ONECUT3O60422 494 aaPredicted RBP13.76□□□□□ -0.21
LINC01953-201ENST00000426870 PRIM1P49642 420 aaKnown RBP13.76□□□□□ -0.21
LINC01953-201ENST00000426870 RNF166Q96A37 237 aaPredicted RBP13.76□□□□□ -0.21
LINC01953-201ENST00000426870 GOLGA8CPA6NN73 597 aa13.75□□□□□ -0.21
LINC01953-201ENST00000426870 HRO43593 1189 aa13.75□□□□□ -0.21
LINC01953-201ENST00000426870 PROX2Q3B8N5 592 aa13.75□□□□□ -0.21
LINC01953-201ENST00000426870 RABGEF1Q9UJ41 708 aa13.75□□□□□ -0.21
LINC01953-201ENST00000426870 NUTM2FA1L443 756 aa13.74□□□□□ -0.21
LINC01953-201ENST00000426870 MRPL50Q8N5N7 158 aaKnown RBP13.74□□□□□ -0.21
LINC01953-201ENST00000426870 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
LINC01953-201ENST00000426870 PACS2Q86VP3 889 aa13.73□□□□□ -0.21
LINC01953-201ENST00000426870 CDHR5Q9HBB8 845 aa13.72□□□□□ -0.21
LINC01953-201ENST00000426870 PRSS12P56730 875 aa13.71□□□□□ -0.21
LINC01953-201ENST00000426870 CDCA7LQ96GN5 454 aa13.71□□□□□ -0.21
LINC01953-201ENST00000426870 KIAA1468Q9P260 1216 aa13.71□□□□□ -0.21
LINC01953-201ENST00000426870 BHMG1C9JSJ3 638 aaPredicted RBP13.68□□□□□ -0.22
LINC01953-201ENST00000426870 RBM27Q9P2N5 1060 aaKnown RBP13.67□□□□□ -0.22
LINC01953-201ENST00000426870 FCHSD2O94868 740 aa13.65□□□□□ -0.22
LINC01953-201ENST00000426870 RBM26Q5T8P6 1007 aaKnown RBP13.65□□□□□ -0.22
LINC01953-201ENST00000426870 LAPTM4BQ86VI4 370 aa13.65□□□□□ -0.22
LINC01953-201ENST00000426870 NBPF26B4DH59 902 aa13.64□□□□□ -0.23
LINC01953-201ENST00000426870 PTGDRQ13258 359 aa13.63□□□□□ -0.23
LINC01953-201ENST00000426870 KCTD12Q96CX2 325 aaKnown RBP13.63□□□□□ -0.23
LINC01953-201ENST00000426870 TSKSQ9UJT2 592 aa13.63□□□□□ -0.23
LINC01953-201ENST00000426870 NPDC1Q9NQX5 325 aaPredicted RBP13.62□□□□□ -0.23
LINC01953-201ENST00000426870 WNT2BQ93097 391 aa13.61□□□□□ -0.23
LINC01953-201ENST00000426870 PADI6Q6TGC4 694 aa13.6□□□□□ -0.23
LINC01953-201ENST00000426870 SEPT9Q9UHD8 586 aaPredicted RBP13.6□□□□□ -0.23
LINC01953-201ENST00000426870 FAM98CQ17RN3 349 aaKnown RBP13.59□□□□□ -0.23
LINC01953-201ENST00000426870 GPIHBP1Q8IV16 184 aa13.59□□□□□ -0.23
LINC01953-201ENST00000426870 ANKK1Q8NFD2 765 aa13.59□□□□□ -0.23
LINC01953-201ENST00000426870 PNMA3Q9UL41 463 aa13.59□□□□□ -0.23
LINC01953-201ENST00000426870 HIC1Q14526 733 aa13.57□□□□□ -0.24
LINC01953-201ENST00000426870 TATDN2Q93075 761 aa13.57□□□□□ -0.24
LINC01953-201ENST00000426870 HCSTQ9UBK5 93 aa13.56□□□□□ -0.24
LINC01953-201ENST00000426870 HDGFP51858 240 aaKnown RBP13.55□□□□□ -0.24
LINC01953-201ENST00000426870 NUDT18Q6ZVK8 323 aa13.55□□□□□ -0.24
LINC01953-201ENST00000426870 ZFRQ96KR1 1074 aaKnown RBP13.55□□□□□ -0.24
LINC01953-201ENST00000426870 FAM198AQ9UFP1 575 aa13.54□□□□□ -0.24
LINC01953-201ENST00000426870 SMAPO00193 183 aa13.53□□□□□ -0.24
LINC01953-201ENST00000426870 TTC13Q8NBP0 860 aa13.53□□□□□ -0.24
LINC01953-201ENST00000426870 GNPATO15228 680 aa13.51□□□□□ -0.25
LINC01953-201ENST00000426870 PTPN5P54829 565 aa13.5□□□□□ -0.25
LINC01953-201ENST00000426870 THSD4Q6ZMP0 1018 aa13.5□□□□□ -0.25
LINC01953-201ENST00000426870 RBM46Q8TBY0 533 aaKnown RBP13.5□□□□□ -0.25
LINC01953-201ENST00000426870 LRCH3Q96II8 777 aa13.5□□□□□ -0.25
LINC01953-201ENST00000426870 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
LINC01953-201ENST00000426870 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.48□□□□□ -0.25
LINC01953-201ENST00000426870 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
LINC01953-201ENST00000426870 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC01953-201ENST00000426870 SOWAHBA6NEL2 793 aa13.46□□□□□ -0.25
LINC01953-201ENST00000426870 OATP04181 439 aa13.45□□□□□ -0.26
LINC01953-201ENST00000426870 BCAMP50895 628 aa13.44□□□□□ -0.26
LINC01953-201ENST00000426870 ADGRG1Q9Y653 693 aa13.44□□□□□ -0.26
LINC01953-201ENST00000426870 SAMD7Q7Z3H4 446 aa13.43□□□□□ -0.26
LINC01953-201ENST00000426870 BCANQ96GW7 911 aa13.43□□□□□ -0.26
LINC01953-201ENST00000426870 C3orf80F5H4A9 247 aa13.42□□□□□ -0.26
LINC01953-201ENST00000426870 GPR37O15354 613 aa13.42□□□□□ -0.26
LINC01953-201ENST00000426870 EYA1Q99502 592 aa13.42□□□□□ -0.26
LINC01953-201ENST00000426870 DNAJB2P25686 324 aa13.41□□□□□ -0.26
LINC01953-201ENST00000426870 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
LINC01953-201ENST00000426870 RNF40O75150 1001 aa13.4□□□□□ -0.26
LINC01953-201ENST00000426870 TSR3Q9UJK0 312 aaKnown RBP13.4□□□□□ -0.26
LINC01953-201ENST00000426870 HPS5Q9UPZ3 1129 aa13.4□□□□□ -0.26
LINC01953-201ENST00000426870 PPP4CP60510 307 aa13.39□□□□□ -0.27
LINC01953-201ENST00000426870 NYAP1Q6ZVC0 841 aa13.39□□□□□ -0.27
LINC01953-201ENST00000426870 FAM161AQ3B820 660 aa13.38□□□□□ -0.27
LINC01953-201ENST00000426870 SLF2Q8IX21 1173 aa13.38□□□□□ -0.27
LINC01953-201ENST00000426870 FECHP22830 423 aa13.37□□□□□ -0.27
LINC01953-201ENST00000426870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.36□□□□□ -0.27
LINC01953-201ENST00000426870 SWT1Q5T5J6 900 aaKnown RBP13.36□□□□□ -0.27
LINC01953-201ENST00000426870 RCCD1A6NED2 376 aa13.35□□□□□ -0.27
LINC01953-201ENST00000426870 MAP2K5Q13163 448 aa13.34□□□□□ -0.27
LINC01953-201ENST00000426870 PXYLP1Q8TE99 480 aa13.34□□□□□ -0.27
LINC01953-201ENST00000426870 METTL3Q86U44 580 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms