RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ARHGAP5Q13017 1502 aa17.65■□□□□ 0.42
COL12A1-205ENST00000425443 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
COL12A1-205ENST00000425443 RGL3Q3MIN7 710 aa17.64■□□□□ 0.41
COL12A1-205ENST00000425443 FANCIQ9NVI1 1328 aa17.63■□□□□ 0.41
COL12A1-205ENST00000425443 ARHGEF5Q12774 1597 aa17.6■□□□□ 0.41
COL12A1-205ENST00000425443 SAMD9LQ8IVG5 1584 aa17.6■□□□□ 0.41
COL12A1-205ENST00000425443 SYCP2Q9BX26 1530 aa17.59■□□□□ 0.41
COL12A1-205ENST00000425443 CDC42BPBQ9Y5S2 1711 aa17.59■□□□□ 0.41
COL12A1-205ENST00000425443 PREX2Q70Z35 1606 aa17.58■□□□□ 0.41
COL12A1-205ENST00000425443 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
COL12A1-205ENST00000425443 ERICH6BQ5W0A0 696 aa17.58■□□□□ 0.4
COL12A1-205ENST00000425443 KDM5CP41229 1560 aa17.57■□□□□ 0.4
COL12A1-205ENST00000425443 CCDC144AA2RUR9 1427 aa17.57■□□□□ 0.4
COL12A1-205ENST00000425443 ROCK2O75116 1388 aaKnown RBP17.57■□□□□ 0.4
COL12A1-205ENST00000425443 ERCC6L2Q5T890 1561 aa17.56■□□□□ 0.4
COL12A1-205ENST00000425443 EFCAB2Q5VUJ9 269 aa17.56■□□□□ 0.4
COL12A1-205ENST00000425443 TTC37Q6PGP7 1564 aa17.55■□□□□ 0.4
COL12A1-205ENST00000425443 FAM135AQ9P2D6 1515 aa17.55■□□□□ 0.4
COL12A1-205ENST00000425443 MYT1LQ9UL68 1186 aa17.54■□□□□ 0.4
COL12A1-205ENST00000425443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.54■□□□□ 0.4
COL12A1-205ENST00000425443 ABCC2Q92887 1545 aa17.54■□□□□ 0.4
COL12A1-205ENST00000425443 ARID4BQ4LE39 1312 aaPredicted RBP17.54■□□□□ 0.4
COL12A1-205ENST00000425443 KDM5DQ9BY66 1539 aa17.54■□□□□ 0.4
COL12A1-205ENST00000425443 UHRF1BP1Q6BDS2 1440 aa17.53■□□□□ 0.4
COL12A1-205ENST00000425443 RALGAPBQ86X10 1494 aa17.53■□□□□ 0.4
COL12A1-205ENST00000425443 ARHGEF12Q9NZN5 1544 aa17.52■□□□□ 0.4
COL12A1-205ENST00000425443 TMC1Q8TDI8 760 aa17.52■□□□□ 0.4
COL12A1-205ENST00000425443 PLEKHH2Q8IVE3 1493 aa17.52■□□□□ 0.39
COL12A1-205ENST00000425443 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.39
COL12A1-205ENST00000425443 SHROOM2Q13796 1616 aa17.51■□□□□ 0.39
COL12A1-205ENST00000425443 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
COL12A1-205ENST00000425443 MYO5CQ9NQX4 1742 aa17.49■□□□□ 0.39
COL12A1-205ENST00000425443 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
COL12A1-205ENST00000425443 NUDCQ9Y266 331 aa17.47■□□□□ 0.39
COL12A1-205ENST00000425443 NBPF1Q3BBV0 1214 aa17.46■□□□□ 0.39
COL12A1-205ENST00000425443 RNF123Q5XPI4 1314 aa17.46■□□□□ 0.38
COL12A1-205ENST00000425443 PLCH2O75038 1416 aa17.45■□□□□ 0.38
COL12A1-205ENST00000425443 SPAG9O60271 1321 aaKnown RBP17.45■□□□□ 0.38
COL12A1-205ENST00000425443 RTN4Q9NQC3 1192 aaKnown RBP17.45■□□□□ 0.38
COL12A1-205ENST00000425443 DEKP35659 375 aaKnown RBP17.44■□□□□ 0.38
COL12A1-205ENST00000425443 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
COL12A1-205ENST00000425443 NBR1Q14596 966 aa17.43■□□□□ 0.38
COL12A1-205ENST00000425443 DUOX2Q9NRD8 1548 aa17.42■□□□□ 0.38
COL12A1-205ENST00000425443 MAST1Q9Y2H9 1570 aa17.42■□□□□ 0.38
COL12A1-205ENST00000425443 ZCCHC11Q5TAX3 1644 aaKnown RBP17.41■□□□□ 0.38
COL12A1-205ENST00000425443 PRAG1Q86YV5 1406 aa17.41■□□□□ 0.38
COL12A1-205ENST00000425443 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
COL12A1-205ENST00000425443 TRAPPC8Q9Y2L5 1435 aa17.39■□□□□ 0.37
COL12A1-205ENST00000425443 RALBP1Q15311 655 aa17.38■□□□□ 0.37
COL12A1-205ENST00000425443 UNC13BO14795 1591 aa17.38■□□□□ 0.37
COL12A1-205ENST00000425443 ERBINQ96RT1 1412 aa17.38■□□□□ 0.37
COL12A1-205ENST00000425443 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
COL12A1-205ENST00000425443 PLXNC1O60486 1568 aa17.38■□□□□ 0.37
COL12A1-205ENST00000425443 E9PCH4 1651 aa17.37■□□□□ 0.37
COL12A1-205ENST00000425443 LRPPRCP42704 1394 aaKnown RBP17.37■□□□□ 0.37
COL12A1-205ENST00000425443 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
COL12A1-205ENST00000425443 A2MP01023 1474 aa17.36■□□□□ 0.37
COL12A1-205ENST00000425443 CC2D1BQ5T0F9 858 aaKnown RBP17.36■□□□□ 0.37
COL12A1-205ENST00000425443 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
COL12A1-205ENST00000425443 CLASP1Q7Z460 1538 aa17.35■□□□□ 0.37
COL12A1-205ENST00000425443 IQGAP3Q86VI3 1631 aa17.34■□□□□ 0.37
COL12A1-205ENST00000425443 TMF1P82094 1093 aa17.34■□□□□ 0.37
COL12A1-205ENST00000425443 KTN1Q86UP2 1357 aaKnown RBP17.34■□□□□ 0.37
COL12A1-205ENST00000425443 ABCC1P33527 1531 aa17.33■□□□□ 0.36
COL12A1-205ENST00000425443 KIF3BO15066 747 aa17.32■□□□□ 0.36
COL12A1-205ENST00000425443 TRPM1Q7Z4N2 1603 aa17.32■□□□□ 0.36
COL12A1-205ENST00000425443 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
COL12A1-205ENST00000425443 KANK1Q14678 1352 aa17.31■□□□□ 0.36
COL12A1-205ENST00000425443 NPM1P06748 294 aaKnown RBP eCLIP17.3■□□□□ 0.36
COL12A1-205ENST00000425443 NLRP13Q86W25 1043 aa17.3■□□□□ 0.36
COL12A1-205ENST00000425443 NOP58Q9Y2X3 529 aaKnown RBP17.3■□□□□ 0.36
COL12A1-205ENST00000425443 PANK3Q9H999 370 aa17.3■□□□□ 0.36
COL12A1-205ENST00000425443 EXOC6Q8TAG9 804 aa17.29■□□□□ 0.36
COL12A1-205ENST00000425443 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
COL12A1-205ENST00000425443 GPRASP1Q5JY77 1395 aa17.28■□□□□ 0.36
COL12A1-205ENST00000425443 FANCAO15360 1455 aa17.28■□□□□ 0.36
COL12A1-205ENST00000425443 DISP3Q9P2K9 1392 aa17.27■□□□□ 0.36
COL12A1-205ENST00000425443 WDR7Q9Y4E6 1490 aa17.27■□□□□ 0.36
COL12A1-205ENST00000425443 TESK2Q96S53 571 aa17.27■□□□□ 0.36
COL12A1-205ENST00000425443 SCAPERQ9BY12 1400 aa17.27■□□□□ 0.35
COL12A1-205ENST00000425443 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.35
COL12A1-205ENST00000425443 CDCA7LQ96GN5 454 aa17.27■□□□□ 0.35
COL12A1-205ENST00000425443 RRP1P56182 461 aaKnown RBP17.26■□□□□ 0.35
COL12A1-205ENST00000425443 EIF2AK4Q9P2K8 1649 aaKnown RBP17.26■□□□□ 0.35
COL12A1-205ENST00000425443 RTEL1-TNFRSF6BF6WH68 1400 aa17.26■□□□□ 0.35
COL12A1-205ENST00000425443 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
COL12A1-205ENST00000425443 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
COL12A1-205ENST00000425443 ATP10AO60312 1499 aa17.25■□□□□ 0.35
COL12A1-205ENST00000425443 ADGRL1O94910 1474 aa17.23■□□□□ 0.35
COL12A1-205ENST00000425443 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
COL12A1-205ENST00000425443 IL27Q8NEV9 243 aa17.23■□□□□ 0.35
COL12A1-205ENST00000425443 COL17A1Q9UMD9 1497 aaPredicted RBP17.22■□□□□ 0.35
COL12A1-205ENST00000425443 RCAN3Q9UKA8 241 aa17.22■□□□□ 0.35
COL12A1-205ENST00000425443 KNSTRNQ9Y448 316 aa17.22■□□□□ 0.35
COL12A1-205ENST00000425443 PRDM15P57071 1507 aaPredicted RBP17.22■□□□□ 0.35
COL12A1-205ENST00000425443 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
COL12A1-205ENST00000425443 PLIN1O60240 522 aa17.21■□□□□ 0.35
COL12A1-205ENST00000425443 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
COL12A1-205ENST00000425443 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
COL12A1-205ENST00000425443 CDCA8Q53HL2 280 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms