RNA–Protein interactions for RNA: ENST00000425021.1

LINC00494-202, long intergenic non-protein coding RNA 494, humanhuman

TSL 2

Gene LINC00494, Length 438 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-202ENST00000425021 TK2O00142 265 aa12.41□□□□□ -0.42
LINC00494-202ENST00000425021 SMARCA2P51531 1590 aa12.41□□□□□ -0.42
LINC00494-202ENST00000425021 FOSBP53539 338 aa12.41□□□□□ -0.42
LINC00494-202ENST00000425021 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
LINC00494-202ENST00000425021 PEG3Q9GZU2 1588 aa12.4□□□□□ -0.42
LINC00494-202ENST00000425021 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
LINC00494-202ENST00000425021 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.43
LINC00494-202ENST00000425021 STAC3Q96MF2 364 aa12.39□□□□□ -0.43
LINC00494-202ENST00000425021 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
LINC00494-202ENST00000425021 PTPREP23469 700 aa12.38□□□□□ -0.43
LINC00494-202ENST00000425021 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
LINC00494-202ENST00000425021 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
LINC00494-202ENST00000425021 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
LINC00494-202ENST00000425021 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
LINC00494-202ENST00000425021 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
LINC00494-202ENST00000425021 WDR70Q9NW82 654 aa12.34□□□□□ -0.43
LINC00494-202ENST00000425021 DPYSL4O14531 572 aa12.33□□□□□ -0.44
LINC00494-202ENST00000425021 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
LINC00494-202ENST00000425021 ADAM33Q9BZ11 813 aa12.31□□□□□ -0.44
LINC00494-202ENST00000425021 HRO43593 1189 aa12.3□□□□□ -0.44
LINC00494-202ENST00000425021 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
LINC00494-202ENST00000425021 VPS9D1Q9Y2B5 631 aa12.3□□□□□ -0.44
LINC00494-202ENST00000425021 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
LINC00494-202ENST00000425021 PHF14O94880 888 aa12.29□□□□□ -0.44
LINC00494-202ENST00000425021 PCDHGA10Q9Y5H3 936 aa12.29□□□□□ -0.44
LINC00494-202ENST00000425021 TYW1BQ6NUM6 668 aa12.28□□□□□ -0.44
LINC00494-202ENST00000425021 SLC4A5Q9BY07 1137 aa12.28□□□□□ -0.44
LINC00494-202ENST00000425021 E2F4Q16254 413 aa12.26□□□□□ -0.45
LINC00494-202ENST00000425021 HCSTQ9UBK5 93 aa12.26□□□□□ -0.45
LINC00494-202ENST00000425021 WIZO95785 1651 aa12.26□□□□□ -0.45
LINC00494-202ENST00000425021 EPAS1Q99814 870 aa12.25□□□□□ -0.45
LINC00494-202ENST00000425021 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
LINC00494-202ENST00000425021 PPP1R3GB7ZBB8 358 aa12.23□□□□□ -0.45
LINC00494-202ENST00000425021 SPDYE16A6NNV3 312 aaPredicted RBP12.22□□□□□ -0.45
LINC00494-202ENST00000425021 KCTD12Q96CX2 325 aaKnown RBP12.22□□□□□ -0.45
LINC00494-202ENST00000425021 RSF1Q96T23 1441 aaPredicted RBP12.21□□□□□ -0.45
LINC00494-202ENST00000425021 PDIA6Q15084 440 aa12.21□□□□□ -0.45
LINC00494-202ENST00000425021 DDX12PQ92771 950 aa12.21□□□□□ -0.45
LINC00494-202ENST00000425021 NBPF3Q9H094 633 aa12.21□□□□□ -0.45
LINC00494-202ENST00000425021 GOLGA8CPA6NN73 597 aa12.2□□□□□ -0.46
LINC00494-202ENST00000425021 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
LINC00494-202ENST00000425021 BHMG1C9JSJ3 638 aaPredicted RBP12.16□□□□□ -0.46
LINC00494-202ENST00000425021 NBR1Q14596 966 aa12.16□□□□□ -0.46
LINC00494-202ENST00000425021 C6orf132Q5T0Z8 1188 aa12.16□□□□□ -0.46
LINC00494-202ENST00000425021 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
LINC00494-202ENST00000425021 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
LINC00494-202ENST00000425021 COL9A1P20849 921 aa12.14□□□□□ -0.47
LINC00494-202ENST00000425021 TOP2AP11388 1531 aaKnown RBP12.13□□□□□ -0.47
LINC00494-202ENST00000425021 RABGEF1Q9UJ41 708 aa12.13□□□□□ -0.47
LINC00494-202ENST00000425021 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
LINC00494-202ENST00000425021 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
LINC00494-202ENST00000425021 MAP3K7O43318 606 aa12.11□□□□□ -0.47
LINC00494-202ENST00000425021 WNT2BQ93097 391 aa12.11□□□□□ -0.47
LINC00494-202ENST00000425021 PTPN5P54829 565 aa12.1□□□□□ -0.47
LINC00494-202ENST00000425021 EN1Q05925 392 aaPredicted RBP12.1□□□□□ -0.47
LINC00494-202ENST00000425021 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
LINC00494-202ENST00000425021 PLA2G2EQ9NZK7 142 aa12.08□□□□□ -0.48
LINC00494-202ENST00000425021 ONECUT3O60422 494 aaPredicted RBP12.07□□□□□ -0.48
LINC00494-202ENST00000425021 THSD4Q6ZMP0 1018 aa12.07□□□□□ -0.48
LINC00494-202ENST00000425021 KIAA1468Q9P260 1216 aa12.07□□□□□ -0.48
LINC00494-202ENST00000425021 NESP48681 1621 aa12.06□□□□□ -0.48
LINC00494-202ENST00000425021 LAPTM4BQ86VI4 370 aa12.05□□□□□ -0.48
LINC00494-202ENST00000425021 ANKK1Q8NFD2 765 aa12.05□□□□□ -0.48
LINC00494-202ENST00000425021 TRIM6-TRIM34B2RNG4 842 aa12.04□□□□□ -0.48
LINC00494-202ENST00000425021 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
LINC00494-202ENST00000425021 ERCC6Q03468 1493 aa12.03□□□□□ -0.48
LINC00494-202ENST00000425021 CADPSQ9ULU8 1353 aa12.02□□□□□ -0.49
LINC00494-202ENST00000425021 PACS2Q86VP3 889 aa12.01□□□□□ -0.49
LINC00494-202ENST00000425021 CERKQ8TCT0 537 aa12.01□□□□□ -0.49
LINC00494-202ENST00000425021 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
LINC00494-202ENST00000425021 SEPT9Q9UHD8 586 aaPredicted RBP11.99□□□□□ -0.49
LINC00494-202ENST00000425021 KIF21AQ7Z4S6 1674 aa11.99□□□□□ -0.49
LINC00494-202ENST00000425021 PRDM2Q13029 1718 aa11.98□□□□□ -0.49
LINC00494-202ENST00000425021 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
LINC00494-202ENST00000425021 ZFRQ96KR1 1074 aaKnown RBP11.98□□□□□ -0.49
LINC00494-202ENST00000425021 FAM98CQ17RN3 349 aaKnown RBP11.97□□□□□ -0.49
LINC00494-202ENST00000425021 CFTRP13569 1480 aa11.96□□□□□ -0.49
LINC00494-202ENST00000425021 OSBPP22059 807 aa11.96□□□□□ -0.49
LINC00494-202ENST00000425021 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
LINC00494-202ENST00000425021 KCNV2Q8TDN2 545 aa11.96□□□□□ -0.49
LINC00494-202ENST00000425021 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
LINC00494-202ENST00000425021 CUX2O14529 1486 aa11.95□□□□□ -0.5
LINC00494-202ENST00000425021 PRSS12P56730 875 aa11.95□□□□□ -0.5
LINC00494-202ENST00000425021 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
LINC00494-202ENST00000425021 THOC2Q8NI27 1593 aaKnown RBP11.95□□□□□ -0.5
LINC00494-202ENST00000425021 SOWAHBA6NEL2 793 aa11.94□□□□□ -0.5
LINC00494-202ENST00000425021 TSKSQ9UJT2 592 aa11.94□□□□□ -0.5
LINC00494-202ENST00000425021 PRIM1P49642 420 aaKnown RBP11.93□□□□□ -0.5
LINC00494-202ENST00000425021 BCAMP50895 628 aa11.93□□□□□ -0.5
LINC00494-202ENST00000425021 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
LINC00494-202ENST00000425021 NBPF26B4DH59 902 aa11.9□□□□□ -0.5
LINC00494-202ENST00000425021 NYAP1Q6ZVC0 841 aa11.9□□□□□ -0.5
LINC00494-202ENST00000425021 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
LINC00494-202ENST00000425021 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.9□□□□□ -0.5
LINC00494-202ENST00000425021 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
LINC00494-202ENST00000425021 CEP164Q9UPV0 1460 aa11.89□□□□□ -0.51
LINC00494-202ENST00000425021 RBM27Q9P2N5 1060 aaKnown RBP11.88□□□□□ -0.51
LINC00494-202ENST00000425021 PNMA3Q9UL41 463 aa11.86□□□□□ -0.51
LINC00494-202ENST00000425021 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
LINC00494-202ENST00000425021 WDR62O43379 1518 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms