RNA–Protein interactions for RNA: ENST00000424439.2

NHLRC4-201, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NHLRC4, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-201ENST00000424439 SHANK2Q9UPX8 1470 aa31.24■■■□□ 2.59
NHLRC4-201ENST00000424439 RALBP1Q15311 655 aa31.23■■■□□ 2.59
NHLRC4-201ENST00000424439 ANKRD50Q9ULJ7 1429 aa31.22■■■□□ 2.59
NHLRC4-201ENST00000424439 MYBBP1AQ9BQG0 1328 aaKnown RBP31.2■■■□□ 2.59
NHLRC4-201ENST00000424439 PTPRGP23470 1445 aa31.2■■■□□ 2.59
NHLRC4-201ENST00000424439 ATP10BO94823 1461 aa31.2■■■□□ 2.59
NHLRC4-201ENST00000424439 POLR3GLQ9BT43 218 aa31.14■■■□□ 2.58
NHLRC4-201ENST00000424439 ZBTB47Q9UFB7 747 aaPredicted RBP31.14■■■□□ 2.58
NHLRC4-201ENST00000424439 CARD11Q9BXL7 1154 aa31.13■■■□□ 2.57
NHLRC4-201ENST00000424439 ZNF326Q5BKZ1 582 aaKnown RBP31.13■■■□□ 2.57
NHLRC4-201ENST00000424439 RRP1P56182 461 aaKnown RBP31.12■■■□□ 2.57
NHLRC4-201ENST00000424439 PDE3BQ13370 1112 aa31.12■■■□□ 2.57
NHLRC4-201ENST00000424439 CDC42BPAQ5VT25 1732 aa31.11■■■□□ 2.57
NHLRC4-201ENST00000424439 PLEKHD1A6NEE1 506 aa31.11■■■□□ 2.57
NHLRC4-201ENST00000424439 TCERG1O14776 1098 aaKnown RBP31.1■■■□□ 2.57
NHLRC4-201ENST00000424439 INSRP06213 1382 aa31.09■■■□□ 2.57
NHLRC4-201ENST00000424439 NUP155O75694 1391 aa31.07■■■□□ 2.56
NHLRC4-201ENST00000424439 ABCC10Q5T3U5 1492 aa31.07■■■□□ 2.56
NHLRC4-201ENST00000424439 ZMYM4Q5VZL5 1548 aa31.07■■■□□ 2.56
NHLRC4-201ENST00000424439 NBR1Q14596 966 aa31.06■■■□□ 2.56
NHLRC4-201ENST00000424439 C9orf84Q5VXU9 1444 aa31.05■■■□□ 2.56
NHLRC4-201ENST00000424439 MS4A1P11836 297 aa31.03■■■□□ 2.56
NHLRC4-201ENST00000424439 PARD3Q8TEW0 1356 aa31.03■■■□□ 2.56
NHLRC4-201ENST00000424439 ST20-MTHFSA0A0A6YYL1 179 aa31.02■■■□□ 2.56
NHLRC4-201ENST00000424439 RCAN3Q9UKA8 241 aa31.02■■■□□ 2.56
NHLRC4-201ENST00000424439 RTL5Q5HYW3 569 aaPredicted RBP31.01■■■□□ 2.56
NHLRC4-201ENST00000424439 NLRP13Q86W25 1043 aa31.01■■■□□ 2.55
NHLRC4-201ENST00000424439 CNGB1Q14028 1251 aaPredicted RBP31■■■□□ 2.55
NHLRC4-201ENST00000424439 ZNF777Q9ULD5 760 aaPredicted RBP31■■■□□ 2.55
NHLRC4-201ENST00000424439 ARHGEF5Q12774 1597 aa31■■■□□ 2.55
NHLRC4-201ENST00000424439 TRPM1Q7Z4N2 1603 aa30.97■■■□□ 2.55
NHLRC4-201ENST00000424439 WASHC2CQ9Y4E1 1318 aa30.96■■■□□ 2.55
NHLRC4-201ENST00000424439 LAMC1P11047 1609 aa30.96■■■□□ 2.55
NHLRC4-201ENST00000424439 EXOC6Q8TAG9 804 aa30.96■■■□□ 2.55
NHLRC4-201ENST00000424439 ABCC2Q92887 1545 aa30.94■■■□□ 2.54
NHLRC4-201ENST00000424439 GPRASP1Q5JY77 1395 aa30.9■■■□□ 2.54
NHLRC4-201ENST00000424439 PRAG1Q86YV5 1406 aa30.9■■■□□ 2.54
NHLRC4-201ENST00000424439 PDE4AP27815 886 aa30.89■■■□□ 2.54
NHLRC4-201ENST00000424439 DCAF11Q8TEB1 546 aa30.89■■■□□ 2.54
NHLRC4-201ENST00000424439 BACH2Q9BYV9 841 aa30.89■■■□□ 2.54
NHLRC4-201ENST00000424439 USP35Q9P2H5 1018 aa30.89■■■□□ 2.54
NHLRC4-201ENST00000424439 TSPY4P0CV99 314 aa30.88■■■□□ 2.53
NHLRC4-201ENST00000424439 TSPY10P0CW01 314 aa30.88■■■□□ 2.53
NHLRC4-201ENST00000424439 BLMP54132 1417 aaPredicted RBP30.88■■■□□ 2.53
NHLRC4-201ENST00000424439 PLEKHH2Q8IVE3 1493 aa30.87■■■□□ 2.53
NHLRC4-201ENST00000424439 PER1O15534 1290 aaPredicted RBP30.86■■■□□ 2.53
NHLRC4-201ENST00000424439 KDM2AQ9Y2K7 1162 aa30.85■■■□□ 2.53
NHLRC4-201ENST00000424439 FAM135AQ9P2D6 1515 aa30.84■■■□□ 2.53
NHLRC4-201ENST00000424439 COL17A1Q9UMD9 1497 aaPredicted RBP30.84■■■□□ 2.53
NHLRC4-201ENST00000424439 TRHP20396 242 aaPredicted RBP30.83■■■□□ 2.53
NHLRC4-201ENST00000424439 PREX2Q70Z35 1606 aa30.83■■■□□ 2.53
NHLRC4-201ENST00000424439 UHRF1BP1LA0JNW5 1464 aa30.81■■■□□ 2.52
NHLRC4-201ENST00000424439 PRDM15P57071 1507 aaPredicted RBP30.81■■■□□ 2.52
NHLRC4-201ENST00000424439 CDC42BPBQ9Y5S2 1711 aa30.8■■■□□ 2.52
NHLRC4-201ENST00000424439 SENP3-EIF4A1A0A087X0R7 540 aa30.8■■■□□ 2.52
NHLRC4-201ENST00000424439 RSPH4AQ5TD94 716 aa30.77■■■□□ 2.52
NHLRC4-201ENST00000424439 CCDC141Q6ZP82 1450 aa30.76■■■□□ 2.52
NHLRC4-201ENST00000424439 UNC13BO14795 1591 aa30.76■■■□□ 2.51
NHLRC4-201ENST00000424439 CCDC144AA2RUR9 1427 aa30.76■■■□□ 2.51
NHLRC4-201ENST00000424439 EIF2AK4Q9P2K8 1649 aaKnown RBP30.76■■■□□ 2.51
NHLRC4-201ENST00000424439 PPM1GO15355 546 aaPredicted RBP30.75■■■□□ 2.51
NHLRC4-201ENST00000424439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.73■■■□□ 2.518e-6■□□□□ 10.5
NHLRC4-201ENST00000424439 SAMD9LQ8IVG5 1584 aa30.73■■■□□ 2.51
NHLRC4-201ENST00000424439 TTC37Q6PGP7 1564 aa30.73■■■□□ 2.51
NHLRC4-201ENST00000424439 MAST1Q9Y2H9 1570 aa30.73■■■□□ 2.51
NHLRC4-201ENST00000424439 ZCCHC11Q5TAX3 1644 aaKnown RBP30.72■■■□□ 2.51
NHLRC4-201ENST00000424439 DDRGK1Q96HY6 314 aa30.71■■■□□ 2.51
NHLRC4-201ENST00000424439 NPM2Q86SE8 214 aaKnown RBP30.7■■■□□ 2.5
NHLRC4-201ENST00000424439 A2MP01023 1474 aa30.69■■■□□ 2.5
NHLRC4-201ENST00000424439 CDCA7LQ96GN5 454 aa30.69■■■□□ 2.5
NHLRC4-201ENST00000424439 TESK2Q96S53 571 aa30.68■■■□□ 2.5
NHLRC4-201ENST00000424439 PLA2R1Q13018 1463 aa30.67■■■□□ 2.5
NHLRC4-201ENST00000424439 ERBINQ96RT1 1412 aa30.66■■■□□ 2.5
NHLRC4-201ENST00000424439 MYO5CQ9NQX4 1742 aa30.66■■■□□ 2.5
NHLRC4-201ENST00000424439 HNRNPMP52272 730 aaKnown RBP eCLIP30.66■■■□□ 2.5
NHLRC4-201ENST00000424439 ATP10AO60312 1499 aa30.64■■■□□ 2.5
NHLRC4-201ENST00000424439 IQGAP3Q86VI3 1631 aa30.64■■■□□ 2.5
NHLRC4-201ENST00000424439 SALL2Q9Y467 1007 aaPredicted RBP30.64■■■□□ 2.5
NHLRC4-201ENST00000424439 DISP3Q9P2K9 1392 aa30.63■■■□□ 2.49
NHLRC4-201ENST00000424439 NEFMP07197 916 aa30.62■■■□□ 2.49
NHLRC4-201ENST00000424439 NBPF1Q3BBV0 1214 aa30.62■■■□□ 2.49
NHLRC4-201ENST00000424439 ARHGAP5Q13017 1502 aa30.62■■■□□ 2.49
NHLRC4-201ENST00000424439 CRBNQ96SW2 442 aa30.62■■■□□ 2.49
NHLRC4-201ENST00000424439 RNF17Q9BXT8 1623 aaKnown RBP30.6■■■□□ 2.49
NHLRC4-201ENST00000424439 TMF1P82094 1093 aa30.58■■■□□ 2.49
NHLRC4-201ENST00000424439 PANK3Q9H999 370 aa30.58■■■□□ 2.49
NHLRC4-201ENST00000424439 KDM2BQ8NHM5 1336 aa30.58■■■□□ 2.49
NHLRC4-201ENST00000424439 PLXNC1O60486 1568 aa30.58■■■□□ 2.49
NHLRC4-201ENST00000424439 SYCP2Q9BX26 1530 aa30.56■■■□□ 2.48
NHLRC4-201ENST00000424439 PLIN1O60240 522 aa30.54■■■□□ 2.48
NHLRC4-201ENST00000424439 CC2D1BQ5T0F9 858 aaKnown RBP30.54■■■□□ 2.48
NHLRC4-201ENST00000424439 LAS1LQ9Y4W2 734 aaKnown RBP30.54■■■□□ 2.48
NHLRC4-201ENST00000424439 NPM1P06748 294 aaKnown RBP eCLIP30.53■■■□□ 2.48
NHLRC4-201ENST00000424439 CENPQQ7L2Z9 268 aaPredicted RBP30.53■■■□□ 2.48
NHLRC4-201ENST00000424439 PLCH2O75038 1416 aa30.52■■■□□ 2.48
NHLRC4-201ENST00000424439 MAGI2Q86UL8 1455 aa30.52■■■□□ 2.48
NHLRC4-201ENST00000424439 KIF13AQ9H1H9 1805 aa30.5■■■□□ 2.47
NHLRC4-201ENST00000424439 RGL3Q3MIN7 710 aa30.48■■■□□ 2.47
NHLRC4-201ENST00000424439 WDR7Q9Y4E6 1490 aa30.47■■■□□ 2.47
NHLRC4-201ENST00000424439 ZNF521Q96K83 1311 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms