RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 TRIM67Q6ZTA4 783 aa5.04□□□□□ -1.6
PMS1-210ENST00000424307 IFNLR1Q8IU57 520 aaPredicted RBP5.04□□□□□ -1.6
PMS1-210ENST00000424307 KRTAP1-3Q8IUG1 177 aa5.04□□□□□ -1.6
PMS1-210ENST00000424307 TSR3Q9UJK0 312 aaKnown RBP5.04□□□□□ -1.6
PMS1-210ENST00000424307 TJAP1Q5JTD0 557 aa5.03□□□□□ -1.6
PMS1-210ENST00000424307 AAASQ9NRG9 546 aa5.03□□□□□ -1.6
PMS1-210ENST00000424307 GGCXP38435 758 aa5.02□□□□□ -1.61
PMS1-210ENST00000424307 FBXO22Q8NEZ5 403 aa5.02□□□□□ -1.61
PMS1-210ENST00000424307 ZNF454Q8N9F8 522 aa5.01□□□□□ -1.61
PMS1-210ENST00000424307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.01□□□□□ -1.61
PMS1-210ENST00000424307 ZFP91Q96JP5 570 aaPredicted RBP5.01□□□□□ -1.61
PMS1-210ENST00000424307 ZFRQ96KR1 1074 aaKnown RBP5.01□□□□□ -1.61
PMS1-210ENST00000424307 PSMG3-AS1Q96PY0 264 aa5.01□□□□□ -1.61
PMS1-210ENST00000424307 ZSCAN1Q8NBB4 408 aa5□□□□□ -1.61
PMS1-210ENST00000424307 TMUB1Q9BVT8 246 aa5□□□□□ -1.61
PMS1-210ENST00000424307 CRIPAKQ8N1N5 446 aa4.99□□□□□ -1.61
PMS1-210ENST00000424307 TERTO14746 1132 aaKnown RBP4.99□□□□□ -1.61
PMS1-210ENST00000424307 FOSBP53539 338 aa4.99□□□□□ -1.61
PMS1-210ENST00000424307 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
PMS1-210ENST00000424307 IL21Q9HBE4 155 aa4.99□□□□□ -1.61
PMS1-210ENST00000424307 ONECUT3O60422 494 aaPredicted RBP4.98□□□□□ -1.61
PMS1-210ENST00000424307 LORP23490 312 aaPredicted RBP4.98□□□□□ -1.61
PMS1-210ENST00000424307 KCNMA1Q12791 1236 aa4.98□□□□□ -1.61
PMS1-210ENST00000424307 C11orf95C9JLR9 678 aaPredicted RBP4.98□□□□□ -1.61
PMS1-210ENST00000424307 KCTD17Q8N5Z5 321 aa4.97□□□□□ -1.61
PMS1-210ENST00000424307 FAM187AA6NFU0 413 aa4.97□□□□□ -1.61
PMS1-210ENST00000424307 ST8SIA5O15466 376 aa4.95□□□□□ -1.62
PMS1-210ENST00000424307 HPS5Q9UPZ3 1129 aa4.95□□□□□ -1.62
PMS1-210ENST00000424307 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.95□□□□□ -1.62
PMS1-210ENST00000424307 PPP1R3GB7ZBB8 358 aa4.94□□□□□ -1.62
PMS1-210ENST00000424307 FOXK1P85037 733 aa4.94□□□□□ -1.62
PMS1-210ENST00000424307 ZNF598Q86UK7 904 aaKnown RBP4.94□□□□□ -1.62
PMS1-210ENST00000424307 SLC19A1P41440 591 aa4.93□□□□□ -1.62
PMS1-210ENST00000424307 ZDHHC16Q969W1 377 aa4.92□□□□□ -1.62
PMS1-210ENST00000424307 LRCH3Q96II8 777 aa4.92□□□□□ -1.62
PMS1-210ENST00000424307 GMPR2Q9P2T1 348 aaKnown RBP4.92□□□□□ -1.62
PMS1-210ENST00000424307 PLPP6Q8IY26 295 aa4.92□□□□□ -1.62
PMS1-210ENST00000424307 JPH4Q96JJ6 628 aa4.92□□□□□ -1.62
PMS1-210ENST00000424307 MTRQ99707 1265 aa4.92□□□□□ -1.62
PMS1-210ENST00000424307 BCL11BQ9C0K0 894 aaPredicted RBP4.92□□□□□ -1.62
PMS1-210ENST00000424307 SPRYD7Q5W111 196 aa4.91□□□□□ -1.62
PMS1-210ENST00000424307 MFRPQ9BY79 579 aa4.91□□□□□ -1.62
PMS1-210ENST00000424307 RNF25Q96BH1 459 aaPredicted RBP4.91□□□□□ -1.62
PMS1-210ENST00000424307 STK24Q9Y6E0 443 aa4.91□□□□□ -1.62
PMS1-210ENST00000424307 GDF9O60383 454 aa4.9□□□□□ -1.62
PMS1-210ENST00000424307 SLC16A10Q8TF71 515 aa4.9□□□□□ -1.62
PMS1-210ENST00000424307 AVPP01185 164 aa4.89□□□□□ -1.63
PMS1-210ENST00000424307 PPP4CP60510 307 aa4.89□□□□□ -1.63
PMS1-210ENST00000424307 FAM98CQ17RN3 349 aaKnown RBP4.89□□□□□ -1.63
PMS1-210ENST00000424307 TMEM151AQ8N4L1 468 aa4.89□□□□□ -1.63
PMS1-210ENST00000424307 ADAM33Q9BZ11 813 aa4.89□□□□□ -1.63
PMS1-210ENST00000424307 OXER1Q8TDS5 423 aa4.89□□□□□ -1.63
PMS1-210ENST00000424307 GSK3AP49840 483 aa4.88□□□□□ -1.63
PMS1-210ENST00000424307 SMCPP49901 116 aaPredicted RBP4.88□□□□□ -1.63
PMS1-210ENST00000424307 CTC1Q2NKJ3 1217 aa4.88□□□□□ -1.63
PMS1-210ENST00000424307 KIAA1468Q9P260 1216 aa4.88□□□□□ -1.63
PMS1-210ENST00000424307 IGHA1P01876 353 aa4.88□□□□□ -1.63
PMS1-210ENST00000424307 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
PMS1-210ENST00000424307 DACH1Q9UI36 760 aa4.88□□□□□ -1.63
PMS1-210ENST00000424307 PROX2Q3B8N5 592 aa4.87□□□□□ -1.63
PMS1-210ENST00000424307 LMOD2Q6P5Q4 547 aa4.87□□□□□ -1.63
PMS1-210ENST00000424307 BTBD11A6QL63 1104 aa4.86□□□□□ -1.63
PMS1-210ENST00000424307 STK25O00506 426 aa4.86□□□□□ -1.63
PMS1-210ENST00000424307 ZNF516Q92618 1163 aa4.86□□□□□ -1.63
PMS1-210ENST00000424307 GPHNQ9NQX3 736 aaPredicted RBP4.86□□□□□ -1.63
PMS1-210ENST00000424307 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
PMS1-210ENST00000424307 AXIN1O15169 862 aa4.85□□□□□ -1.63
PMS1-210ENST00000424307 RYDENQ9NUL5 291 aaKnown RBP4.85□□□□□ -1.63
PMS1-210ENST00000424307 GMPRP36959 345 aa4.84□□□□□ -1.63
PMS1-210ENST00000424307 EMID1Q96A84 441 aaPredicted RBP4.84□□□□□ -1.63
PMS1-210ENST00000424307 GDF11O95390 407 aa4.83□□□□□ -1.64
PMS1-210ENST00000424307 ZNF697Q5TEC3 545 aa4.83□□□□□ -1.64
PMS1-210ENST00000424307 NPAS3Q8IXF0 933 aa4.83□□□□□ -1.64
PMS1-210ENST00000424307 SENP2Q9HC62 589 aa4.82□□□□□ -1.64
PMS1-210ENST00000424307 KRTAP9-9Q9BYP9 154 aa4.82□□□□□ -1.64
PMS1-210ENST00000424307 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
PMS1-210ENST00000424307 RNF225M0QZC1 329 aaPredicted RBP4.81□□□□□ -1.64
PMS1-210ENST00000424307 NKX2-3Q8TAU0 364 aa4.81□□□□□ -1.64
PMS1-210ENST00000424307 IRF7Q92985 503 aa4.81□□□□□ -1.64
PMS1-210ENST00000424307 COL9A1P20849 921 aa4.81□□□□□ -1.64
PMS1-210ENST00000424307 RASSF7Q02833 373 aa4.8□□□□□ -1.64
PMS1-210ENST00000424307 SEPT9Q9UHD8 586 aaPredicted RBP4.8□□□□□ -1.64
PMS1-210ENST00000424307 TNFRSF10AO00220 468 aa4.8□□□□□ -1.64
PMS1-210ENST00000424307 TRIM47Q96LD4 638 aa4.8□□□□□ -1.64
PMS1-210ENST00000424307 DSG2Q14126 1118 aa4.79□□□□□ -1.64
PMS1-210ENST00000424307 NECTIN2Q92692 538 aa4.79□□□□□ -1.64
PMS1-210ENST00000424307 KIFC2Q96AC6 838 aa4.79□□□□□ -1.64
PMS1-210ENST00000424307 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
PMS1-210ENST00000424307 RNF223E7ERA6 249 aa4.78□□□□□ -1.64
PMS1-210ENST00000424307 ECM2O94769 699 aaPredicted RBP4.78□□□□□ -1.64
PMS1-210ENST00000424307 SNRPBP14678 240 aaKnown RBP4.78□□□□□ -1.64
PMS1-210ENST00000424307 ANKLE1Q8NAG6 615 aa4.78□□□□□ -1.64
PMS1-210ENST00000424307 NXF1Q9UBU9 619 aaKnown RBP4.77□□□□□ -1.65
PMS1-210ENST00000424307 TRIM6-TRIM34B2RNG4 842 aa4.77□□□□□ -1.65
PMS1-210ENST00000424307 FOXK2Q01167 660 aa4.77□□□□□ -1.65
PMS1-210ENST00000424307 LIAT1Q6ZQX7 453 aa4.77□□□□□ -1.65
PMS1-210ENST00000424307 FBXW7Q969H0 707 aa4.76□□□□□ -1.65
PMS1-210ENST00000424307 DNAJC5Q9H3Z4 198 aa4.76□□□□□ -1.65
PMS1-210ENST00000424307 PDE4AP27815 886 aa4.74□□□□□ -1.65
PMS1-210ENST00000424307 ATP13A2Q9NQ11 1180 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms