RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 RTL5Q5HYW3 569 aaPredicted RBP15.82■□□□□ 0.12
ERCC1-204ENST00000423698 SKAP1Q86WV1 359 aa15.82■□□□□ 0.12
ERCC1-204ENST00000423698 AFAP1Q8N556 730 aa15.81■□□□□ 0.12
ERCC1-204ENST00000423698 BCORL1Q5H9F3 1711 aa15.81■□□□□ 0.12
ERCC1-204ENST00000423698 ITSN2Q9NZM3 1697 aa15.81■□□□□ 0.12
ERCC1-204ENST00000423698 ABCA8O94911 1581 aa15.81■□□□□ 0.12
ERCC1-204ENST00000423698 PLIN1O60240 522 aa15.81■□□□□ 0.12
ERCC1-204ENST00000423698 CDCA7LQ96GN5 454 aa15.81■□□□□ 0.12
ERCC1-204ENST00000423698 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
ERCC1-204ENST00000423698 CHD1O14646 1710 aa15.8■□□□□ 0.12
ERCC1-204ENST00000423698 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
ERCC1-204ENST00000423698 PANK3Q9H999 370 aa15.77■□□□□ 0.11
ERCC1-204ENST00000423698 NUDCQ9Y266 331 aa15.76■□□□□ 0.11
ERCC1-204ENST00000423698 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
ERCC1-204ENST00000423698 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
ERCC1-204ENST00000423698 CCDC144AA2RUR9 1427 aa15.75■□□□□ 0.11
ERCC1-204ENST00000423698 ABCC10Q5T3U5 1492 aa15.75■□□□□ 0.11
ERCC1-204ENST00000423698 CDC42BPAQ5VT25 1732 aa15.74■□□□□ 0.11
ERCC1-204ENST00000423698 ARHGAP5Q13017 1502 aa15.74■□□□□ 0.11
ERCC1-204ENST00000423698 ADCY10Q96PN6 1610 aa15.73■□□□□ 0.11
ERCC1-204ENST00000423698 PLEKHH2Q8IVE3 1493 aa15.73■□□□□ 0.11
ERCC1-204ENST00000423698 EXOC6Q8TAG9 804 aa15.73■□□□□ 0.11
ERCC1-204ENST00000423698 SYCP2Q9BX26 1530 aa15.71■□□□□ 0.11
ERCC1-204ENST00000423698 NUTM2DQ5VT03 806 aaPredicted RBP15.71■□□□□ 0.11
ERCC1-204ENST00000423698 ADGBQ8N7X0 1667 aa15.71■□□□□ 0.1
ERCC1-204ENST00000423698 DISP3Q9P2K9 1392 aa15.7■□□□□ 0.1
ERCC1-204ENST00000423698 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
ERCC1-204ENST00000423698 TNNT2P45379 298 aaPredicted RBP15.7■□□□□ 0.1
ERCC1-204ENST00000423698 MYBBP1AQ9BQG0 1328 aaKnown RBP15.69■□□□□ 0.1
ERCC1-204ENST00000423698 ADGRL2O95490 1459 aa15.68■□□□□ 0.1
ERCC1-204ENST00000423698 MBD5Q9P267 1494 aa15.68■□□□□ 0.1
ERCC1-204ENST00000423698 ANP32AP39687 249 aaKnown RBP15.68■□□□□ 0.1
ERCC1-204ENST00000423698 CCDC146Q8IYE0 955 aa15.68■□□□□ 0.1
ERCC1-204ENST00000423698 CROCC2H7BZ55 1655 aa15.67■□□□□ 0.1
ERCC1-204ENST00000423698 KIF3BO15066 747 aa15.66■□□□□ 0.1
ERCC1-204ENST00000423698 CCDC141Q6ZP82 1450 aa15.65■□□□□ 0.1
ERCC1-204ENST00000423698 FAM135AQ9P2D6 1515 aa15.65■□□□□ 0.1
ERCC1-204ENST00000423698 KDM5CP41229 1560 aa15.65■□□□□ 0.1
ERCC1-204ENST00000423698 KTN1Q86UP2 1357 aaKnown RBP15.65■□□□□ 0.1
ERCC1-204ENST00000423698 RCAN3Q9UKA8 241 aa15.64■□□□□ 0.09
ERCC1-204ENST00000423698 PKNOX2Q96KN3 472 aa15.64■□□□□ 0.09
ERCC1-204ENST00000423698 TTC37Q6PGP7 1564 aa15.64■□□□□ 0.09
ERCC1-204ENST00000423698 SAMD9LQ8IVG5 1584 aa15.64■□□□□ 0.09
ERCC1-204ENST00000423698 EFCAB2Q5VUJ9 269 aa15.63■□□□□ 0.09
ERCC1-204ENST00000423698 NLRP13Q86W25 1043 aa15.63■□□□□ 0.09
ERCC1-204ENST00000423698 SPAG9O60271 1321 aaKnown RBP15.63■□□□□ 0.09
ERCC1-204ENST00000423698 RALGAPBQ86X10 1494 aa15.62■□□□□ 0.09
ERCC1-204ENST00000423698 IPO9Q96P70 1041 aaKnown RBP15.62■□□□□ 0.09
ERCC1-204ENST00000423698 TESK2Q96S53 571 aa15.62■□□□□ 0.09
ERCC1-204ENST00000423698 ADAMTS8Q9UP79 889 aa15.62■□□□□ 0.09
ERCC1-204ENST00000423698 NEFMP07197 916 aa15.62■□□□□ 0.09
ERCC1-204ENST00000423698 TMF1P82094 1093 aa15.62■□□□□ 0.09
ERCC1-204ENST00000423698 BRPF3Q9ULD4 1205 aa15.62■□□□□ 0.09
ERCC1-204ENST00000423698 PLA2R1Q13018 1463 aa15.62■□□□□ 0.09
ERCC1-204ENST00000423698 RALBP1Q15311 655 aa15.61■□□□□ 0.09
ERCC1-204ENST00000423698 SHANK2Q9UPX8 1470 aa15.61■□□□□ 0.09
ERCC1-204ENST00000423698 PER1O15534 1290 aaPredicted RBP15.61■□□□□ 0.09
ERCC1-204ENST00000423698 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
ERCC1-204ENST00000423698 SMG6Q86US8 1419 aaKnown RBP15.61■□□□□ 0.09
ERCC1-204ENST00000423698 TRAPPC8Q9Y2L5 1435 aa15.6■□□□□ 0.09
ERCC1-204ENST00000423698 NEUROD2Q15784 382 aa15.6■□□□□ 0.09
ERCC1-204ENST00000423698 C20orf194Q5TEA3 1177 aa15.6■□□□□ 0.09
ERCC1-204ENST00000423698 KNSTRNQ9Y448 316 aa15.6■□□□□ 0.09
ERCC1-204ENST00000423698 RRP1P56182 461 aaKnown RBP15.6■□□□□ 0.09
ERCC1-204ENST00000423698 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.6■□□□□ 0.095e-10■■■■■ 75.1
ERCC1-204ENST00000423698 ABCC2Q92887 1545 aa15.6■□□□□ 0.09
ERCC1-204ENST00000423698 PRAG1Q86YV5 1406 aa15.6■□□□□ 0.09
ERCC1-204ENST00000423698 CDC42BPBQ9Y5S2 1711 aa15.59■□□□□ 0.09
ERCC1-204ENST00000423698 SAFB2Q14151 953 aaKnown RBP eCLIP15.59■□□□□ 0.09
ERCC1-204ENST00000423698 CFAP70Q5T0N1 1121 aa15.59■□□□□ 0.09
ERCC1-204ENST00000423698 ARHGEF12Q9NZN5 1544 aa15.59■□□□□ 0.09
ERCC1-204ENST00000423698 A2MP01023 1474 aa15.58■□□□□ 0.09
ERCC1-204ENST00000423698 GGT6Q6P531 493 aa15.58■□□□□ 0.08
ERCC1-204ENST00000423698 PREX2Q70Z35 1606 aa15.58■□□□□ 0.08
ERCC1-204ENST00000423698 WDR43Q15061 677 aaKnown RBP eCLIP15.56■□□□□ 0.08
ERCC1-204ENST00000423698 UHRF1BP1Q6BDS2 1440 aa15.56■□□□□ 0.08
ERCC1-204ENST00000423698 RSPH4AQ5TD94 716 aa15.56■□□□□ 0.08
ERCC1-204ENST00000423698 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
ERCC1-204ENST00000423698 CRBNQ96SW2 442 aa15.55■□□□□ 0.08
ERCC1-204ENST00000423698 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
ERCC1-204ENST00000423698 TMEM132EQ6IEE7 984 aa15.54■□□□□ 0.08
ERCC1-204ENST00000423698 PODXL2Q9NZ53 605 aa15.54■□□□□ 0.08
ERCC1-204ENST00000423698 ARHGEF5Q12774 1597 aa15.54■□□□□ 0.08
ERCC1-204ENST00000423698 ERBINQ96RT1 1412 aa15.53■□□□□ 0.08
ERCC1-204ENST00000423698 TRAK1Q9UPV9 953 aa15.53■□□□□ 0.08
ERCC1-204ENST00000423698 ARID4BQ4LE39 1312 aaPredicted RBP15.52■□□□□ 0.08
ERCC1-204ENST00000423698 SCAPERQ9BY12 1400 aa15.52■□□□□ 0.08
ERCC1-204ENST00000423698 RRP7AQ9Y3A4 280 aaKnown RBP15.51■□□□□ 0.07
ERCC1-204ENST00000423698 KDM5DQ9BY66 1539 aa15.51■□□□□ 0.07
ERCC1-204ENST00000423698 ADGRF5Q8IZF2 1346 aa15.5■□□□□ 0.07
ERCC1-204ENST00000423698 ZCCHC11Q5TAX3 1644 aaKnown RBP15.5■□□□□ 0.07
ERCC1-204ENST00000423698 MYO5CQ9NQX4 1742 aa15.5■□□□□ 0.07
ERCC1-204ENST00000423698 PPP2R1AP30153 589 aa15.5■□□□□ 0.07
ERCC1-204ENST00000423698 LRPPRCP42704 1394 aaKnown RBP15.48■□□□□ 0.07
ERCC1-204ENST00000423698 APAF1O14727 1248 aa15.48■□□□□ 0.07
ERCC1-204ENST00000423698 SLC4A3P48751 1232 aa15.48■□□□□ 0.07
ERCC1-204ENST00000423698 PARD3Q8TEW0 1356 aa15.48■□□□□ 0.07
ERCC1-204ENST00000423698 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
ERCC1-204ENST00000423698 PLCH2O75038 1416 aa15.47■□□□□ 0.07
ERCC1-204ENST00000423698 CFAP65Q6ZU64 1925 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms