RNA–Protein interactions for RNA: ENST00000422788.5

CCDC66-205, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-205ENST00000422788 COL9A1P20849 921 aa11.15□□□□□ -0.62
CCDC66-205ENST00000422788 ONECUT3O60422 494 aaPredicted RBP11.12□□□□□ -0.63
CCDC66-205ENST00000422788 PROX2Q3B8N5 592 aa11.12□□□□□ -0.63
CCDC66-205ENST00000422788 LAPTM4BQ86VI4 370 aa11.12□□□□□ -0.63
CCDC66-205ENST00000422788 EPAS1Q99814 870 aa11.12□□□□□ -0.63
CCDC66-205ENST00000422788 C6orf132Q5T0Z8 1188 aa11.09□□□□□ -0.63
CCDC66-205ENST00000422788 ANKK1Q8NFD2 765 aa11.09□□□□□ -0.63
CCDC66-205ENST00000422788 A0A0G2JS52 829 aa11.08□□□□□ -0.64
CCDC66-205ENST00000422788 DPYSL4O14531 572 aa11.07□□□□□ -0.64
CCDC66-205ENST00000422788 ITGBL1O95965 494 aaPredicted RBP11.06□□□□□ -0.64
CCDC66-205ENST00000422788 KIAA1468Q9P260 1216 aa11.06□□□□□ -0.64
CCDC66-205ENST00000422788 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
CCDC66-205ENST00000422788 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
CCDC66-205ENST00000422788 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
CCDC66-205ENST00000422788 ZFRQ96KR1 1074 aaKnown RBP11.04□□□□□ -0.64
CCDC66-205ENST00000422788 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
CCDC66-205ENST00000422788 BCAMP50895 628 aa11.01□□□□□ -0.65
CCDC66-205ENST00000422788 PDIA6Q15084 440 aa11□□□□□ -0.65
CCDC66-205ENST00000422788 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
CCDC66-205ENST00000422788 DDX12PQ92771 950 aa10.98□□□□□ -0.65
CCDC66-205ENST00000422788 EN1Q05925 392 aaPredicted RBP10.97□□□□□ -0.65
CCDC66-205ENST00000422788 SEPT9Q9UHD8 586 aaPredicted RBP10.97□□□□□ -0.65
CCDC66-205ENST00000422788 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
CCDC66-205ENST00000422788 WBP1LQ9NX94 342 aa10.96□□□□□ -0.65
CCDC66-205ENST00000422788 SPDYE16A6NNV3 312 aaPredicted RBP10.95□□□□□ -0.66
CCDC66-205ENST00000422788 IRX2Q9BZI1 471 aaPredicted RBP10.95□□□□□ -0.66
CCDC66-205ENST00000422788 ARIH1Q9Y4X5 557 aaPredicted RBP10.94□□□□□ -0.66
CCDC66-205ENST00000422788 NBR1Q14596 966 aa10.92□□□□□ -0.66
CCDC66-205ENST00000422788 SPRYD3Q8NCJ5 442 aa10.92□□□□□ -0.66
CCDC66-205ENST00000422788 TSR3Q9UJK0 312 aaKnown RBP10.92□□□□□ -0.66
CCDC66-205ENST00000422788 TSKSQ9UJT2 592 aa10.92□□□□□ -0.66
CCDC66-205ENST00000422788 TSR1Q2NL82 804 aaKnown RBP10.91□□□□□ -0.66
CCDC66-205ENST00000422788 PACS2Q86VP3 889 aa10.91□□□□□ -0.66
CCDC66-205ENST00000422788 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.91□□□□□ -0.66
CCDC66-205ENST00000422788 MAP3K7O43318 606 aa10.9□□□□□ -0.66
CCDC66-205ENST00000422788 KCNC4Q03721 635 aa10.9□□□□□ -0.66
CCDC66-205ENST00000422788 LRCH3Q96II8 777 aa10.9□□□□□ -0.66
CCDC66-205ENST00000422788 E2F4Q16254 413 aa10.88□□□□□ -0.67
CCDC66-205ENST00000422788 CERKQ8TCT0 537 aa10.88□□□□□ -0.67
CCDC66-205ENST00000422788 HPS5Q9UPZ3 1129 aa10.87□□□□□ -0.67
CCDC66-205ENST00000422788 PRSS12P56730 875 aa10.86□□□□□ -0.67
CCDC66-205ENST00000422788 CDCA7LQ96GN5 454 aa10.86□□□□□ -0.67
CCDC66-205ENST00000422788 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.86□□□□□ -0.67
CCDC66-205ENST00000422788 PRIM1P49642 420 aaKnown RBP10.84□□□□□ -0.67
CCDC66-205ENST00000422788 FAM198AQ9UFP1 575 aa10.83□□□□□ -0.68
CCDC66-205ENST00000422788 PPP4CP60510 307 aa10.81□□□□□ -0.68
CCDC66-205ENST00000422788 OSBPP22059 807 aa10.8□□□□□ -0.68
CCDC66-205ENST00000422788 SAMD7Q7Z3H4 446 aa10.79□□□□□ -0.68
CCDC66-205ENST00000422788 RBM27Q9P2N5 1060 aaKnown RBP10.79□□□□□ -0.68
CCDC66-205ENST00000422788 GRXCR2A6NFK2 248 aa10.78□□□□□ -0.68
CCDC66-205ENST00000422788 C3orf80F5H4A9 247 aa10.78□□□□□ -0.68
CCDC66-205ENST00000422788 SMAPO00193 183 aa10.78□□□□□ -0.68
CCDC66-205ENST00000422788 TJAP1Q5JTD0 557 aa10.78□□□□□ -0.68
CCDC66-205ENST00000422788 TATDN2Q93075 761 aa10.78□□□□□ -0.68
CCDC66-205ENST00000422788 WDR70Q9NW82 654 aa10.78□□□□□ -0.68
CCDC66-205ENST00000422788 NBPF26B4DH59 902 aa10.77□□□□□ -0.69
CCDC66-205ENST00000422788 AMER1Q5JTC6 1135 aaPredicted RBP10.77□□□□□ -0.69
CCDC66-205ENST00000422788 TTC13Q8NBP0 860 aa10.75□□□□□ -0.69
CCDC66-205ENST00000422788 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
CCDC66-205ENST00000422788 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
CCDC66-205ENST00000422788 CDHR5Q9HBB8 845 aa10.72□□□□□ -0.69
CCDC66-205ENST00000422788 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
CCDC66-205ENST00000422788 NUDT18Q6ZVK8 323 aa10.71□□□□□ -0.69
CCDC66-205ENST00000422788 CFAP44Q96MT7 982 aa10.71□□□□□ -0.69
CCDC66-205ENST00000422788 IL21Q9HBE4 155 aa10.71□□□□□ -0.69
CCDC66-205ENST00000422788 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
CCDC66-205ENST00000422788 MTRQ99707 1265 aa10.7□□□□□ -0.7
CCDC66-205ENST00000422788 HDGFP51858 240 aaKnown RBP10.68□□□□□ -0.7
CCDC66-205ENST00000422788 Q6ZNB5 142 aa10.68□□□□□ -0.7
CCDC66-205ENST00000422788 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
CCDC66-205ENST00000422788 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
CCDC66-205ENST00000422788 APLP1P51693 650 aa10.65□□□□□ -0.7
CCDC66-205ENST00000422788 PPP1R18Q6NYC8 613 aa10.64□□□□□ -0.71
CCDC66-205ENST00000422788 V9GY48 417 aaPredicted RBP10.64□□□□□ -0.71
CCDC66-205ENST00000422788 PADI6Q6TGC4 694 aa10.63□□□□□ -0.71
CCDC66-205ENST00000422788 ZNF516Q92618 1163 aa10.63□□□□□ -0.71
CCDC66-205ENST00000422788 SLF2Q8IX21 1173 aa10.62□□□□□ -0.71
CCDC66-205ENST00000422788 EYA1Q99502 592 aa10.62□□□□□ -0.71
CCDC66-205ENST00000422788 PRKD2Q9BZL6 878 aa10.62□□□□□ -0.71
CCDC66-205ENST00000422788 SWT1Q5T5J6 900 aaKnown RBP10.61□□□□□ -0.71
CCDC66-205ENST00000422788 GFRA3O60609 400 aa10.6□□□□□ -0.71
CCDC66-205ENST00000422788 RNF40O75150 1001 aa10.6□□□□□ -0.71
CCDC66-205ENST00000422788 ARHGEF1Q92888 912 aaKnown RBP10.6□□□□□ -0.71
CCDC66-205ENST00000422788 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.6□□□□□ -0.71
CCDC66-205ENST00000422788 LCE2BO14633 110 aa10.59□□□□□ -0.71
CCDC66-205ENST00000422788 NRG2O14511 850 aaPredicted RBP10.56□□□□□ -0.72
CCDC66-205ENST00000422788 TRAF7Q6Q0C0 670 aa10.56□□□□□ -0.72
CCDC66-205ENST00000422788 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
CCDC66-205ENST00000422788 MLLT3P42568 568 aaPredicted RBP10.55□□□□□ -0.72
CCDC66-205ENST00000422788 SLC4A3P48751 1232 aa10.55□□□□□ -0.72
CCDC66-205ENST00000422788 TMUB1Q9BVT8 246 aa10.55□□□□□ -0.72
CCDC66-205ENST00000422788 PRR14Q9BWN1 585 aa10.55□□□□□ -0.72
CCDC66-205ENST00000422788 PTGDRQ13258 359 aa10.54□□□□□ -0.72
CCDC66-205ENST00000422788 ZPR1O75312 459 aa10.53□□□□□ -0.72
CCDC66-205ENST00000422788 GGCXP38435 758 aa10.53□□□□□ -0.72
CCDC66-205ENST00000422788 COPS2P61201 443 aa10.52□□□□□ -0.73
CCDC66-205ENST00000422788 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
CCDC66-205ENST00000422788 DNAJB2P25686 324 aa10.49□□□□□ -0.73
CCDC66-205ENST00000422788 TMEM134Q9H6X4 195 aa10.49□□□□□ -0.73
CCDC66-205ENST00000422788 TSHZ2Q9NRE2 1034 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 361.5 ms