RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
LINC00397-201ENST00000422074 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
LINC00397-201ENST00000422074 EN1Q05925 392 aaPredicted RBP10.85□□□□□ -0.67
LINC00397-201ENST00000422074 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
LINC00397-201ENST00000422074 HRO43593 1189 aa10.84□□□□□ -0.67
LINC00397-201ENST00000422074 OSBPP22059 807 aa10.84□□□□□ -0.67
LINC00397-201ENST00000422074 PPP1R3GB7ZBB8 358 aa10.83□□□□□ -0.68
LINC00397-201ENST00000422074 NBR1Q14596 966 aa10.83□□□□□ -0.68
LINC00397-201ENST00000422074 C6orf132Q5T0Z8 1188 aa10.83□□□□□ -0.68
LINC00397-201ENST00000422074 ZBED2Q9BTP6 218 aa10.83□□□□□ -0.68
LINC00397-201ENST00000422074 VPS9D1Q9Y2B5 631 aa10.82□□□□□ -0.68
LINC00397-201ENST00000422074 GRXCR2A6NFK2 248 aa10.81□□□□□ -0.68
LINC00397-201ENST00000422074 COL9A1P20849 921 aa10.81□□□□□ -0.68
LINC00397-201ENST00000422074 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
LINC00397-201ENST00000422074 MLLT3P42568 568 aaPredicted RBP10.78□□□□□ -0.68
LINC00397-201ENST00000422074 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
LINC00397-201ENST00000422074 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
LINC00397-201ENST00000422074 BHMG1C9JSJ3 638 aaPredicted RBP10.77□□□□□ -0.69
LINC00397-201ENST00000422074 ONECUT3O60422 494 aaPredicted RBP10.77□□□□□ -0.69
LINC00397-201ENST00000422074 MAP3K7O43318 606 aa10.76□□□□□ -0.69
LINC00397-201ENST00000422074 TSR1Q2NL82 804 aaKnown RBP10.76□□□□□ -0.69
LINC00397-201ENST00000422074 SEMA3EO15041 775 aa10.75□□□□□ -0.69
LINC00397-201ENST00000422074 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
LINC00397-201ENST00000422074 CERKQ8TCT0 537 aa10.74□□□□□ -0.69
LINC00397-201ENST00000422074 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
LINC00397-201ENST00000422074 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
LINC00397-201ENST00000422074 PROX2Q3B8N5 592 aa10.71□□□□□ -0.69
LINC00397-201ENST00000422074 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
LINC00397-201ENST00000422074 TRIM6-TRIM34B2RNG4 842 aa10.69□□□□□ -0.7
LINC00397-201ENST00000422074 CDHR5Q9HBB8 845 aa10.68□□□□□ -0.7
LINC00397-201ENST00000422074 RBM27Q9P2N5 1060 aaKnown RBP10.68□□□□□ -0.7
LINC00397-201ENST00000422074 PRSS12P56730 875 aa10.67□□□□□ -0.7
LINC00397-201ENST00000422074 NBPF3Q9H094 633 aa10.67□□□□□ -0.7
LINC00397-201ENST00000422074 SMYD5Q6GMV2 418 aa10.66□□□□□ -0.7
LINC00397-201ENST00000422074 KIAA1468Q9P260 1216 aa10.66□□□□□ -0.7
LINC00397-201ENST00000422074 TSKSQ9UJT2 592 aa10.66□□□□□ -0.7
LINC00397-201ENST00000422074 LAPTM4BQ86VI4 370 aa10.65□□□□□ -0.7
LINC00397-201ENST00000422074 CDCA7LQ96GN5 454 aa10.65□□□□□ -0.7
LINC00397-201ENST00000422074 STAC3Q96MF2 364 aa10.65□□□□□ -0.7
LINC00397-201ENST00000422074 MRPL50Q8N5N7 158 aaKnown RBP10.64□□□□□ -0.71
LINC00397-201ENST00000422074 TTC13Q8NBP0 860 aa10.64□□□□□ -0.71
LINC00397-201ENST00000422074 PTGDRQ13258 359 aa10.63□□□□□ -0.71
LINC00397-201ENST00000422074 FAM198AQ9UFP1 575 aa10.63□□□□□ -0.71
LINC00397-201ENST00000422074 PACS2Q86VP3 889 aa10.62□□□□□ -0.71
LINC00397-201ENST00000422074 FAM98CQ17RN3 349 aaKnown RBP10.58□□□□□ -0.72
LINC00397-201ENST00000422074 RBM26Q5T8P6 1007 aaKnown RBP10.58□□□□□ -0.72
LINC00397-201ENST00000422074 NUTM2FA1L443 756 aa10.57□□□□□ -0.72
LINC00397-201ENST00000422074 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
LINC00397-201ENST00000422074 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
LINC00397-201ENST00000422074 FCHSD2O94868 740 aa10.56□□□□□ -0.72
LINC00397-201ENST00000422074 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
LINC00397-201ENST00000422074 KCTD12Q96CX2 325 aaKnown RBP10.56□□□□□ -0.72
LINC00397-201ENST00000422074 GOLGA8CPA6NN73 597 aa10.55□□□□□ -0.72
LINC00397-201ENST00000422074 THSD4Q6ZMP0 1018 aa10.55□□□□□ -0.72
LINC00397-201ENST00000422074 TATDN2Q93075 761 aa10.55□□□□□ -0.72
LINC00397-201ENST00000422074 WNT2BQ93097 391 aa10.55□□□□□ -0.72
LINC00397-201ENST00000422074 ZFRQ96KR1 1074 aaKnown RBP10.55□□□□□ -0.72
LINC00397-201ENST00000422074 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
LINC00397-201ENST00000422074 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
LINC00397-201ENST00000422074 GPR37O15354 613 aa10.54□□□□□ -0.72
LINC00397-201ENST00000422074 HIC1Q14526 733 aa10.52□□□□□ -0.73
LINC00397-201ENST00000422074 ANKK1Q8NFD2 765 aa10.52□□□□□ -0.73
LINC00397-201ENST00000422074 SOWAHBA6NEL2 793 aa10.51□□□□□ -0.73
LINC00397-201ENST00000422074 NUDT18Q6ZVK8 323 aa10.51□□□□□ -0.73
LINC00397-201ENST00000422074 EYA1Q99502 592 aa10.51□□□□□ -0.73
LINC00397-201ENST00000422074 PNMA3Q9UL41 463 aa10.51□□□□□ -0.73
LINC00397-201ENST00000422074 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
LINC00397-201ENST00000422074 SMAPO00193 183 aa10.49□□□□□ -0.73
LINC00397-201ENST00000422074 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
LINC00397-201ENST00000422074 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
LINC00397-201ENST00000422074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
LINC00397-201ENST00000422074 GNPATO15228 680 aa10.46□□□□□ -0.73
LINC00397-201ENST00000422074 GPIHBP1Q8IV16 184 aa10.46□□□□□ -0.73
LINC00397-201ENST00000422074 BCAMP50895 628 aa10.45□□□□□ -0.74
LINC00397-201ENST00000422074 LRCH3Q96II8 777 aa10.45□□□□□ -0.74
LINC00397-201ENST00000422074 PTPN5P54829 565 aa10.44□□□□□ -0.74
LINC00397-201ENST00000422074 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.44□□□□□ -0.74
LINC00397-201ENST00000422074 FECHP22830 423 aa10.43□□□□□ -0.74
LINC00397-201ENST00000422074 SAMD7Q7Z3H4 446 aa10.43□□□□□ -0.74
LINC00397-201ENST00000422074 RBM46Q8TBY0 533 aaKnown RBP10.43□□□□□ -0.74
LINC00397-201ENST00000422074 NYAP1Q6ZVC0 841 aa10.42□□□□□ -0.74
LINC00397-201ENST00000422074 OATP04181 439 aa10.41□□□□□ -0.74
LINC00397-201ENST00000422074 TSR3Q9UJK0 312 aaKnown RBP10.41□□□□□ -0.74
LINC00397-201ENST00000422074 PXYLP1Q8TE99 480 aa10.4□□□□□ -0.74
LINC00397-201ENST00000422074 DNAJB2P25686 324 aa10.39□□□□□ -0.75
LINC00397-201ENST00000422074 HDGFP51858 240 aaKnown RBP10.39□□□□□ -0.75
LINC00397-201ENST00000422074 WBP1LQ9NX94 342 aa10.39□□□□□ -0.75
LINC00397-201ENST00000422074 FAM161AQ3B820 660 aa10.38□□□□□ -0.75
LINC00397-201ENST00000422074 LMOD2Q6P5Q4 547 aa10.38□□□□□ -0.75
LINC00397-201ENST00000422074 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
LINC00397-201ENST00000422074 TMEM134Q9H6X4 195 aa10.38□□□□□ -0.75
LINC00397-201ENST00000422074 HPS5Q9UPZ3 1129 aa10.38□□□□□ -0.75
LINC00397-201ENST00000422074 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.37□□□□□ -0.75
LINC00397-201ENST00000422074 RCCD1A6NED2 376 aa10.37□□□□□ -0.75
LINC00397-201ENST00000422074 SWT1Q5T5J6 900 aaKnown RBP10.37□□□□□ -0.75
LINC00397-201ENST00000422074 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
LINC00397-201ENST00000422074 PPP4CP60510 307 aa10.34□□□□□ -0.75
LINC00397-201ENST00000422074 SLF2Q8IX21 1173 aa10.34□□□□□ -0.75
LINC00397-201ENST00000422074 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
LINC00397-201ENST00000422074 MAP2K5Q13163 448 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms