RNA–Protein interactions for RNA: ENST00000419169.5

SMG7-204, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2

Gene SMG7, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-204ENST00000419169 LRPPRCP42704 1394 aaKnown RBP23.55■■□□□ 1.36
SMG7-204ENST00000419169 KTN1Q86UP2 1357 aaKnown RBP23.55■■□□□ 1.36
SMG7-204ENST00000419169 E9PCH4 1651 aa23.55■■□□□ 1.36
SMG7-204ENST00000419169 BRD4O60885 1362 aaPredicted RBP23.55■■□□□ 1.36
SMG7-204ENST00000419169 MYBBP1AQ9BQG0 1328 aaKnown RBP23.54■■□□□ 1.36
SMG7-204ENST00000419169 RALBP1Q15311 655 aa23.52■■□□□ 1.36
SMG7-204ENST00000419169 FAM135AQ9P2D6 1515 aa23.52■■□□□ 1.36
SMG7-204ENST00000419169 CCDC136Q96JN2 1154 aa23.52■■□□□ 1.36
SMG7-204ENST00000419169 CCDC141Q6ZP82 1450 aa23.51■■□□□ 1.35
SMG7-204ENST00000419169 SAMD9LQ8IVG5 1584 aa23.5■■□□□ 1.35
SMG7-204ENST00000419169 CDC42BPBQ9Y5S2 1711 aa23.48■■□□□ 1.35
SMG7-204ENST00000419169 BCL11AQ9H165 835 aa23.48■■□□□ 1.35
SMG7-204ENST00000419169 PREX2Q70Z35 1606 aa23.47■■□□□ 1.35
SMG7-204ENST00000419169 TRPM1Q7Z4N2 1603 aa23.47■■□□□ 1.35
SMG7-204ENST00000419169 PRAG1Q86YV5 1406 aa23.46■■□□□ 1.35
SMG7-204ENST00000419169 CCDC144AA2RUR9 1427 aa23.45■■□□□ 1.34
SMG7-204ENST00000419169 RSPH4AQ5TD94 716 aa23.43■■□□□ 1.34
SMG7-204ENST00000419169 PARD3Q8TEW0 1356 aa23.41■■□□□ 1.34
SMG7-204ENST00000419169 RGL3Q3MIN7 710 aa23.41■■□□□ 1.34
SMG7-204ENST00000419169 NLRP13Q86W25 1043 aa23.4■■□□□ 1.34
SMG7-204ENST00000419169 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.39■■□□□ 1.344e-9■■□□□ 11.6
SMG7-204ENST00000419169 UNC13BO14795 1591 aa23.39■■□□□ 1.34
SMG7-204ENST00000419169 CHD1O14646 1710 aa23.39■■□□□ 1.33
SMG7-204ENST00000419169 SYCP2Q9BX26 1530 aa23.38■■□□□ 1.33
SMG7-204ENST00000419169 GPRASP1Q5JY77 1395 aa23.38■■□□□ 1.33
SMG7-204ENST00000419169 NOP58Q9Y2X3 529 aaKnown RBP23.38■■□□□ 1.33
SMG7-204ENST00000419169 PLA2R1Q13018 1463 aa23.37■■□□□ 1.33
SMG7-204ENST00000419169 MAST1Q9Y2H9 1570 aa23.37■■□□□ 1.33
SMG7-204ENST00000419169 NBPF1Q3BBV0 1214 aa23.37■■□□□ 1.33
SMG7-204ENST00000419169 RRP1P56182 461 aaKnown RBP23.36■■□□□ 1.33
SMG7-204ENST00000419169 A2MP01023 1474 aa23.36■■□□□ 1.33
SMG7-204ENST00000419169 PER1O15534 1290 aaPredicted RBP23.35■■□□□ 1.33
SMG7-204ENST00000419169 LAMC1P11047 1609 aa23.35■■□□□ 1.33
SMG7-204ENST00000419169 COL17A1Q9UMD9 1497 aaPredicted RBP23.34■■□□□ 1.33
SMG7-204ENST00000419169 MYT1LQ9UL68 1186 aa23.34■■□□□ 1.33
SMG7-204ENST00000419169 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.33
SMG7-204ENST00000419169 TTC37Q6PGP7 1564 aa23.33■■□□□ 1.33
SMG7-204ENST00000419169 ARHGAP5Q13017 1502 aa23.32■■□□□ 1.32
SMG7-204ENST00000419169 RCAN3Q9UKA8 241 aa23.32■■□□□ 1.32
SMG7-204ENST00000419169 SALL2Q9Y467 1007 aaPredicted RBP23.32■■□□□ 1.32
SMG7-204ENST00000419169 PDE3BQ13370 1112 aa23.31■■□□□ 1.32
SMG7-204ENST00000419169 IQGAP3Q86VI3 1631 aa23.31■■□□□ 1.32
SMG7-204ENST00000419169 MYO5CQ9NQX4 1742 aa23.3■■□□□ 1.32
SMG7-204ENST00000419169 PLXNC1O60486 1568 aa23.3■■□□□ 1.32
SMG7-204ENST00000419169 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
SMG7-204ENST00000419169 TESK2Q96S53 571 aa23.3■■□□□ 1.32
SMG7-204ENST00000419169 DISP3Q9P2K9 1392 aa23.29■■□□□ 1.32
SMG7-204ENST00000419169 ANP32AP39687 249 aaKnown RBP23.29■■□□□ 1.32
SMG7-204ENST00000419169 WASHC2CQ9Y4E1 1318 aa23.29■■□□□ 1.32
SMG7-204ENST00000419169 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.29■■□□□ 1.321e-5■■■■□ 25.8
SMG7-204ENST00000419169 EIF2AK4Q9P2K8 1649 aaKnown RBP23.28■■□□□ 1.32
SMG7-204ENST00000419169 EXOC6Q8TAG9 804 aa23.28■■□□□ 1.32
SMG7-204ENST00000419169 PLEKHH2Q8IVE3 1493 aa23.27■■□□□ 1.32
SMG7-204ENST00000419169 IPO9Q96P70 1041 aaKnown RBP23.26■■□□□ 1.31
SMG7-204ENST00000419169 ERBINQ96RT1 1412 aa23.25■■□□□ 1.31
SMG7-204ENST00000419169 CC2D1BQ5T0F9 858 aaKnown RBP23.24■■□□□ 1.31
SMG7-204ENST00000419169 ZMYM4Q5VZL5 1548 aa23.24■■□□□ 1.31
SMG7-204ENST00000419169 ATP10AO60312 1499 aa23.24■■□□□ 1.31
SMG7-204ENST00000419169 INSRP06213 1382 aa23.23■■□□□ 1.31
SMG7-204ENST00000419169 BLMP54132 1417 aaPredicted RBP23.23■■□□□ 1.31
SMG7-204ENST00000419169 DUOX2Q9NRD8 1548 aa23.22■■□□□ 1.31
SMG7-204ENST00000419169 PANK3Q9H999 370 aa23.22■■□□□ 1.31
SMG7-204ENST00000419169 MAGI2Q86UL8 1455 aa23.22■■□□□ 1.31
SMG7-204ENST00000419169 CDCA7LQ96GN5 454 aa23.22■■□□□ 1.31
SMG7-204ENST00000419169 TMF1P82094 1093 aa23.2■■□□□ 1.3
SMG7-204ENST00000419169 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
SMG7-204ENST00000419169 RNF17Q9BXT8 1623 aaKnown RBP23.18■■□□□ 1.3
SMG7-204ENST00000419169 TCERG1O14776 1098 aaKnown RBP23.18■■□□□ 1.3
SMG7-204ENST00000419169 ERCC6L2Q5T890 1561 aa23.17■■□□□ 1.3
SMG7-204ENST00000419169 NBR1Q14596 966 aa23.16■■□□□ 1.3
SMG7-204ENST00000419169 ZBTB47Q9UFB7 747 aaPredicted RBP23.16■■□□□ 1.3
SMG7-204ENST00000419169 ABCC2Q92887 1545 aa23.16■■□□□ 1.3
SMG7-204ENST00000419169 DEKP35659 375 aaKnown RBP23.15■■□□□ 1.3
SMG7-204ENST00000419169 PLIN1O60240 522 aa23.09■■□□□ 1.29
SMG7-204ENST00000419169 PLCH2O75038 1416 aa23.09■■□□□ 1.29
SMG7-204ENST00000419169 PDE4AP27815 886 aa23.09■■□□□ 1.29
SMG7-204ENST00000419169 WDR7Q9Y4E6 1490 aa23.09■■□□□ 1.29
SMG7-204ENST00000419169 MS4A1P11836 297 aa23.08■■□□□ 1.29
SMG7-204ENST00000419169 MADDQ8WXG6 1647 aa23.08■■□□□ 1.29
SMG7-204ENST00000419169 IQGAP1P46940 1657 aa23.07■■□□□ 1.28
SMG7-204ENST00000419169 ABCC1P33527 1531 aa23.06■■□□□ 1.28
SMG7-204ENST00000419169 BACH2Q9BYV9 841 aa23.06■■□□□ 1.28
SMG7-204ENST00000419169 ADAMTS8Q9UP79 889 aa23.06■■□□□ 1.28
SMG7-204ENST00000419169 EFCAB2Q5VUJ9 269 aa23.04■■□□□ 1.28
SMG7-204ENST00000419169 NPM2Q86SE8 214 aaKnown RBP23.04■■□□□ 1.28
SMG7-204ENST00000419169 CRBNQ96SW2 442 aa23.04■■□□□ 1.28
SMG7-204ENST00000419169 TRAPPC8Q9Y2L5 1435 aa23.03■■□□□ 1.28
SMG7-204ENST00000419169 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
SMG7-204ENST00000419169 PPP2R1AP30153 589 aa23.02■■□□□ 1.28
SMG7-204ENST00000419169 SPHKAPQ2M3C7 1700 aa23.01■■□□□ 1.27
SMG7-204ENST00000419169 TRPM2O94759 1503 aa23.01■■□□□ 1.27
SMG7-204ENST00000419169 CLASP1Q7Z460 1538 aa23.01■■□□□ 1.27
SMG7-204ENST00000419169 SYNMO15061 1565 aa23.01■■□□□ 1.27
SMG7-204ENST00000419169 ZCCHC11Q5TAX3 1644 aaKnown RBP23.01■■□□□ 1.27
SMG7-204ENST00000419169 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
SMG7-204ENST00000419169 CEP152O94986 1710 aa22.99■■□□□ 1.27
SMG7-204ENST00000419169 SCAF11Q99590 1463 aaKnown RBP22.99■■□□□ 1.27
SMG7-204ENST00000419169 RTL5Q5HYW3 569 aaPredicted RBP22.99■■□□□ 1.27
SMG7-204ENST00000419169 PLEKHH1Q9ULM0 1364 aa22.98■■□□□ 1.27
SMG7-204ENST00000419169 WDR43Q15061 677 aaKnown RBP eCLIP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms