RNA–Protein interactions for RNA: ENST00000416002.1

AF240627.1-201, humanhuman

TSL 3 BASIC

Gene AF240627.1, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF240627.1-201ENST00000416002 WNT2BQ93097 391 aa12.14□□□□□ -0.47
AF240627.1-201ENST00000416002 EPAS1Q99814 870 aa12.14□□□□□ -0.47
AF240627.1-201ENST00000416002 THSD4Q6ZMP0 1018 aa12.12□□□□□ -0.47
AF240627.1-201ENST00000416002 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
AF240627.1-201ENST00000416002 COL9A1P20849 921 aa12.11□□□□□ -0.47
AF240627.1-201ENST00000416002 RABGEF1Q9UJ41 708 aa12.11□□□□□ -0.47
AF240627.1-201ENST00000416002 PROX2Q3B8N5 592 aa12.1□□□□□ -0.47
AF240627.1-201ENST00000416002 C6orf132Q5T0Z8 1188 aa12.09□□□□□ -0.47
AF240627.1-201ENST00000416002 CFAP44Q96MT7 982 aa12.09□□□□□ -0.47
AF240627.1-201ENST00000416002 PAXIP1Q6ZW49 1069 aaPredicted RBP12.08□□□□□ -0.48
AF240627.1-201ENST00000416002 DDX12PQ92771 950 aa12.07□□□□□ -0.48
AF240627.1-201ENST00000416002 RBM33Q96EV2 1170 aaKnown RBP12.06□□□□□ -0.48
AF240627.1-201ENST00000416002 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
AF240627.1-201ENST00000416002 WDR70Q9NW82 654 aa12.05□□□□□ -0.48
AF240627.1-201ENST00000416002 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
AF240627.1-201ENST00000416002 SPDYE16A6NNV3 312 aaPredicted RBP12.03□□□□□ -0.48
AF240627.1-201ENST00000416002 E2F4Q16254 413 aa12.03□□□□□ -0.48
AF240627.1-201ENST00000416002 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
AF240627.1-201ENST00000416002 PDIA6Q15084 440 aa12.02□□□□□ -0.49
AF240627.1-201ENST00000416002 ANKK1Q8NFD2 765 aa12.02□□□□□ -0.49
AF240627.1-201ENST00000416002 NBR1Q14596 966 aa12□□□□□ -0.49
AF240627.1-201ENST00000416002 TRIM6-TRIM34B2RNG4 842 aa11.99□□□□□ -0.49
AF240627.1-201ENST00000416002 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
AF240627.1-201ENST00000416002 MAP3K7O43318 606 aa11.97□□□□□ -0.49
AF240627.1-201ENST00000416002 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
AF240627.1-201ENST00000416002 ZFRQ96KR1 1074 aaKnown RBP11.97□□□□□ -0.49
AF240627.1-201ENST00000416002 ARIH1Q9Y4X5 557 aaPredicted RBP11.96□□□□□ -0.49
AF240627.1-201ENST00000416002 SOWAHBA6NEL2 793 aa11.95□□□□□ -0.5
AF240627.1-201ENST00000416002 SEPT9Q9UHD8 586 aaPredicted RBP11.95□□□□□ -0.5
AF240627.1-201ENST00000416002 BCAMP50895 628 aa11.94□□□□□ -0.5
AF240627.1-201ENST00000416002 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
AF240627.1-201ENST00000416002 PACS2Q86VP3 889 aa11.93□□□□□ -0.5
AF240627.1-201ENST00000416002 FAM98CQ17RN3 349 aaKnown RBP11.92□□□□□ -0.5
AF240627.1-201ENST00000416002 GRXCR2A6NFK2 248 aa11.91□□□□□ -0.5
AF240627.1-201ENST00000416002 NYAP1Q6ZVC0 841 aa11.89□□□□□ -0.51
AF240627.1-201ENST00000416002 TSKSQ9UJT2 592 aa11.89□□□□□ -0.51
AF240627.1-201ENST00000416002 CERKQ8TCT0 537 aa11.88□□□□□ -0.51
AF240627.1-201ENST00000416002 RGS20O76081 388 aa11.87□□□□□ -0.51
AF240627.1-201ENST00000416002 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.87□□□□□ -0.51
AF240627.1-201ENST00000416002 A0A0G2JS52 829 aa11.86□□□□□ -0.51
AF240627.1-201ENST00000416002 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
AF240627.1-201ENST00000416002 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
AF240627.1-201ENST00000416002 WBP1LQ9NX94 342 aa11.86□□□□□ -0.51
AF240627.1-201ENST00000416002 PRSS12P56730 875 aa11.85□□□□□ -0.51
AF240627.1-201ENST00000416002 ITGBL1O95965 494 aaPredicted RBP11.84□□□□□ -0.51
AF240627.1-201ENST00000416002 TSR3Q9UJK0 312 aaKnown RBP11.84□□□□□ -0.51
AF240627.1-201ENST00000416002 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
AF240627.1-201ENST00000416002 OSBPP22059 807 aa11.82□□□□□ -0.52
AF240627.1-201ENST00000416002 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
AF240627.1-201ENST00000416002 SMAPO00193 183 aa11.79□□□□□ -0.52
AF240627.1-201ENST00000416002 PPP4CP60510 307 aa11.78□□□□□ -0.52
AF240627.1-201ENST00000416002 KCNC4Q03721 635 aa11.78□□□□□ -0.52
AF240627.1-201ENST00000416002 TATDN2Q93075 761 aa11.78□□□□□ -0.52
AF240627.1-201ENST00000416002 FAM198AQ9UFP1 575 aa11.78□□□□□ -0.52
AF240627.1-201ENST00000416002 PNMA3Q9UL41 463 aa11.78□□□□□ -0.52
AF240627.1-201ENST00000416002 NBPF26B4DH59 902 aa11.77□□□□□ -0.53
AF240627.1-201ENST00000416002 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
AF240627.1-201ENST00000416002 CDHR5Q9HBB8 845 aa11.76□□□□□ -0.53
AF240627.1-201ENST00000416002 SAMD7Q7Z3H4 446 aa11.75□□□□□ -0.53
AF240627.1-201ENST00000416002 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
AF240627.1-201ENST00000416002 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
AF240627.1-201ENST00000416002 NUDT18Q6ZVK8 323 aa11.73□□□□□ -0.53
AF240627.1-201ENST00000416002 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
AF240627.1-201ENST00000416002 C3orf80F5H4A9 247 aa11.72□□□□□ -0.53
AF240627.1-201ENST00000416002 IRX2Q9BZI1 471 aaPredicted RBP11.7□□□□□ -0.54
AF240627.1-201ENST00000416002 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
AF240627.1-201ENST00000416002 PADI6Q6TGC4 694 aa11.67□□□□□ -0.54
AF240627.1-201ENST00000416002 TTC13Q8NBP0 860 aa11.67□□□□□ -0.54
AF240627.1-201ENST00000416002 KCNV2Q8TDN2 545 aa11.66□□□□□ -0.54
AF240627.1-201ENST00000416002 RNF40O75150 1001 aa11.65□□□□□ -0.54
AF240627.1-201ENST00000416002 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
AF240627.1-201ENST00000416002 TJAP1Q5JTD0 557 aa11.62□□□□□ -0.55
AF240627.1-201ENST00000416002 NECTIN2Q92692 538 aa11.62□□□□□ -0.55
AF240627.1-201ENST00000416002 SWT1Q5T5J6 900 aaKnown RBP11.6□□□□□ -0.55
AF240627.1-201ENST00000416002 MTRQ99707 1265 aa11.6□□□□□ -0.55
AF240627.1-201ENST00000416002 IL21Q9HBE4 155 aa11.6□□□□□ -0.55
AF240627.1-201ENST00000416002 SLC4A3P48751 1232 aa11.59□□□□□ -0.55
AF240627.1-201ENST00000416002 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
AF240627.1-201ENST00000416002 SLF2Q8IX21 1173 aa11.59□□□□□ -0.55
AF240627.1-201ENST00000416002 EYA1Q99502 592 aa11.59□□□□□ -0.55
AF240627.1-201ENST00000416002 APLP1P51693 650 aa11.57□□□□□ -0.56
AF240627.1-201ENST00000416002 PTGDRQ13258 359 aa11.56□□□□□ -0.56
AF240627.1-201ENST00000416002 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
AF240627.1-201ENST00000416002 ZNF516Q92618 1163 aa11.52□□□□□ -0.57
AF240627.1-201ENST00000416002 PPP1R18Q6NYC8 613 aa11.51□□□□□ -0.57
AF240627.1-201ENST00000416002 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
AF240627.1-201ENST00000416002 DNAJB2P25686 324 aa11.5□□□□□ -0.57
AF240627.1-201ENST00000416002 SEMA3EO15041 775 aa11.49□□□□□ -0.57
AF240627.1-201ENST00000416002 PRR14Q9BWN1 585 aa11.49□□□□□ -0.57
AF240627.1-201ENST00000416002 COPS2P61201 443 aa11.48□□□□□ -0.57
AF240627.1-201ENST00000416002 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.48□□□□□ -0.57
AF240627.1-201ENST00000416002 FCHSD2O94868 740 aa11.47□□□□□ -0.57
AF240627.1-201ENST00000416002 Q6ZNB5 142 aa11.47□□□□□ -0.57
AF240627.1-201ENST00000416002 ADGRG1Q9Y653 693 aa11.47□□□□□ -0.57
AF240627.1-201ENST00000416002 LAPTM4AQ15012 233 aa11.46□□□□□ -0.57
AF240627.1-201ENST00000416002 PRKD2Q9BZL6 878 aa11.46□□□□□ -0.57
AF240627.1-201ENST00000416002 PLCB2Q00722 1185 aa11.45□□□□□ -0.58
AF240627.1-201ENST00000416002 NKX2-3Q8TAU0 364 aa11.45□□□□□ -0.58
AF240627.1-201ENST00000416002 TMEM134Q9H6X4 195 aa11.45□□□□□ -0.58
AF240627.1-201ENST00000416002 GGCXP38435 758 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms