RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 HSP90AB3PQ58FF7 597 aa8.71□□□□□ -1.01
CLIP4-205ENST00000415891 RBM26Q5T8P6 1007 aaKnown RBP8.71□□□□□ -1.01
CLIP4-205ENST00000415891 ARMCX6Q7L4S7 300 aa8.71□□□□□ -1.01
CLIP4-205ENST00000415891 ERCC3P19447 782 aa8.7□□□□□ -1.02
CLIP4-205ENST00000415891 FOXD4Q12950 439 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-205ENST00000415891 MPNDQ8N594 471 aa8.7□□□□□ -1.02
CLIP4-205ENST00000415891 EVI5LQ96CN4 794 aa8.7□□□□□ -1.02
CLIP4-205ENST00000415891 TSPAN18Q96SJ8 248 aa8.7□□□□□ -1.02
CLIP4-205ENST00000415891 NRDCO43847 1150 aa8.7□□□□□ -1.02
CLIP4-205ENST00000415891 ARID4AP29374 1257 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-205ENST00000415891 WASHC2CQ9Y4E1 1318 aa8.69□□□□□ -1.02
CLIP4-205ENST00000415891 CCER2I3L3R5 266 aa8.69□□□□□ -1.02
CLIP4-205ENST00000415891 POLD1P28340 1107 aa8.69□□□□□ -1.02
CLIP4-205ENST00000415891 ZC3H4Q9UPT8 1303 aaKnown RBP8.68□□□□□ -1.02
CLIP4-205ENST00000415891 DIEXFQ68CQ4 756 aaKnown RBP8.68□□□□□ -1.02
CLIP4-205ENST00000415891 LMOD2Q6P5Q4 547 aa8.68□□□□□ -1.02
CLIP4-205ENST00000415891 GOLIM4O00461 696 aa8.68□□□□□ -1.02
CLIP4-205ENST00000415891 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
CLIP4-205ENST00000415891 RIOK3O14730 519 aaKnown RBP8.66□□□□□ -1.02
CLIP4-205ENST00000415891 KRBA2Q6ZNG9 492 aa8.66□□□□□ -1.02
CLIP4-205ENST00000415891 FBXW7Q969H0 707 aa8.66□□□□□ -1.02
CLIP4-205ENST00000415891 SETDB1Q15047 1291 aa8.66□□□□□ -1.02
CLIP4-205ENST00000415891 ARHGEF1Q92888 912 aaKnown RBP8.66□□□□□ -1.02
CLIP4-205ENST00000415891 PDCL3Q9H2J4 239 aa8.66□□□□□ -1.02
CLIP4-205ENST00000415891 SSFA2P28290 1259 aa8.65□□□□□ -1.02
CLIP4-205ENST00000415891 ANP32AP39687 249 aaKnown RBP8.65□□□□□ -1.02
CLIP4-205ENST00000415891 DNAJC14Q6Y2X3 702 aaPredicted RBP8.65□□□□□ -1.03
CLIP4-205ENST00000415891 MKL1Q969V6 931 aa8.65□□□□□ -1.03
CLIP4-205ENST00000415891 IGSF5Q9NSI5 407 aa8.65□□□□□ -1.03
CLIP4-205ENST00000415891 CALRP27797 417 aaKnown RBP8.64□□□□□ -1.03
CLIP4-205ENST00000415891 SMAP1Q8IYB5 467 aaPredicted RBP8.64□□□□□ -1.03
CLIP4-205ENST00000415891 MKRN3Q13064 507 aaKnown RBP8.64□□□□□ -1.03
CLIP4-205ENST00000415891 HDAC1Q13547 482 aaPredicted RBP8.64□□□□□ -1.03
CLIP4-205ENST00000415891 IRF5Q13568 498 aa8.64□□□□□ -1.03
CLIP4-205ENST00000415891 NBPF10Q6P3W6 841 aaKnown RBP8.64□□□□□ -1.03
CLIP4-205ENST00000415891 SIRT1Q96EB6 747 aa8.64□□□□□ -1.03
CLIP4-205ENST00000415891 YY1AP1Q9H869 796 aa8.64□□□□□ -1.03
CLIP4-205ENST00000415891 ZNF500O60304 480 aaPredicted RBP8.63□□□□□ -1.03
CLIP4-205ENST00000415891 PPFIA4O75335 1185 aa8.63□□□□□ -1.03
CLIP4-205ENST00000415891 RGL3Q3MIN7 710 aa8.63□□□□□ -1.03
CLIP4-205ENST00000415891 UTP14CQ5TAP6 766 aaKnown RBP8.63□□□□□ -1.03
CLIP4-205ENST00000415891 IFNLR1Q8IU57 520 aaPredicted RBP8.63□□□□□ -1.03
CLIP4-205ENST00000415891 NGEFQ8N5V2 710 aa8.63□□□□□ -1.03
CLIP4-205ENST00000415891 NUB1Q9Y5A7 615 aa8.63□□□□□ -1.03
CLIP4-205ENST00000415891 ANP32CO43423 234 aa8.63□□□□□ -1.03
CLIP4-205ENST00000415891 NBPF6Q5VWK0 638 aa8.63□□□□□ -1.03
CLIP4-205ENST00000415891 NBPF5PQ86XG9 351 aaPredicted RBP8.63□□□□□ -1.03
CLIP4-205ENST00000415891 NBPF4Q96M43 638 aa8.63□□□□□ -1.03
CLIP4-205ENST00000415891 GEMIN8Q9NWZ8 242 aaKnown RBP8.63□□□□□ -1.03
CLIP4-205ENST00000415891 NOP58Q9Y2X3 529 aaKnown RBP8.63□□□□□ -1.03
CLIP4-205ENST00000415891 ANKRD62A6NC57 917 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 GOLGA6CA6NDK9 693 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 GOLGA6BA6NDN3 693 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 RGL2O15211 777 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 GOLGA6DP0CG33 693 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 SCP2P22307 547 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 MTA1Q13330 715 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 LONRF3Q496Y0 759 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 TAF3Q5VWG9 929 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 MICAL1Q8TDZ2 1067 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 SLC24A3Q9HC58 644 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 GOLGA6AQ9NYA3 693 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 IGF1RP08069 1367 aa8.62□□□□□ -1.03
CLIP4-205ENST00000415891 UNCXA6NJT0 531 aa8.61□□□□□ -1.03
CLIP4-205ENST00000415891 MAP2K1Q02750 393 aaPredicted RBP8.61□□□□□ -1.03
CLIP4-205ENST00000415891 DDX46Q7L014 1031 aaKnown RBP8.61□□□□□ -1.03
CLIP4-205ENST00000415891 ANKRD23Q86SG2 305 aa8.61□□□□□ -1.03
CLIP4-205ENST00000415891 DHX16O60231 1041 aaKnown RBP8.61□□□□□ -1.03
CLIP4-205ENST00000415891 MSL3Q8N5Y2 521 aaKnown RBP8.61□□□□□ -1.03
CLIP4-205ENST00000415891 ZNF513Q8N8E2 541 aaPredicted RBP8.61□□□□□ -1.03
CLIP4-205ENST00000415891 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
CLIP4-205ENST00000415891 SLC20A2Q08357 652 aa8.6□□□□□ -1.03
CLIP4-205ENST00000415891 RHBDL3P58872 404 aa8.6□□□□□ -1.03
CLIP4-205ENST00000415891 RAI14Q9P0K7 980 aa8.6□□□□□ -1.03
CLIP4-205ENST00000415891 WASHC2AQ641Q2 1341 aa8.6□□□□□ -1.03
CLIP4-205ENST00000415891 PEX14O75381 377 aa8.59□□□□□ -1.03
CLIP4-205ENST00000415891 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
CLIP4-205ENST00000415891 ZNF280DQ6N043 979 aa8.59□□□□□ -1.03
CLIP4-205ENST00000415891 UBA5Q9GZZ9 404 aa8.59□□□□□ -1.03
CLIP4-205ENST00000415891 BSDC1Q9NW68 430 aaPredicted RBP8.59□□□□□ -1.03
CLIP4-205ENST00000415891 AMOTL2Q9Y2J4 779 aa8.59□□□□□ -1.03
CLIP4-205ENST00000415891 SSR1P43307 286 aaKnown RBP8.59□□□□□ -1.03
CLIP4-205ENST00000415891 BARGINQ6ZT62 677 aa8.59□□□□□ -1.03
CLIP4-205ENST00000415891 RETREG2Q8NC44 543 aa8.59□□□□□ -1.03
CLIP4-205ENST00000415891 CXorf38Q8TB03 319 aa8.59□□□□□ -1.03
CLIP4-205ENST00000415891 FEZ2Q9UHY8 353 aaPredicted RBP8.59□□□□□ -1.03
CLIP4-205ENST00000415891 STK24Q9Y6E0 443 aa8.59□□□□□ -1.03
CLIP4-205ENST00000415891 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
CLIP4-205ENST00000415891 MAMSTRQ6ZN01 415 aa8.58□□□□□ -1.04
CLIP4-205ENST00000415891 GET4Q7L5D6 327 aaPredicted RBP8.58□□□□□ -1.04
CLIP4-205ENST00000415891 HIRIP3Q9BW71 556 aaPredicted RBP8.58□□□□□ -1.04
CLIP4-205ENST00000415891 EPB41L2O43491 1005 aaKnown RBP8.57□□□□□ -1.04
CLIP4-205ENST00000415891 CCDC181Q5TID7 509 aa8.57□□□□□ -1.04
CLIP4-205ENST00000415891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.57□□□□□ -1.04
CLIP4-205ENST00000415891 DNAJC5BQ9UF47 199 aa8.57□□□□□ -1.04
CLIP4-205ENST00000415891 PNMA2Q9UL42 364 aa8.57□□□□□ -1.04
CLIP4-205ENST00000415891 ABCC9O60706 1549 aa8.57□□□□□ -1.04
CLIP4-205ENST00000415891 MAP4K4O95819 1239 aaPredicted RBP8.56□□□□□ -1.04
CLIP4-205ENST00000415891 ZKSCAN8Q15776 578 aaPredicted RBP8.56□□□□□ -1.04
CLIP4-205ENST00000415891 DNTTIP2Q5QJE6 756 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms