RNA–Protein interactions for RNA: ENST00000415683.2

GTF3C2-203, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-203ENST00000415683 RAPGEF2Q9Y4G8 1499 aa7.44□□□□□ -1.22
GTF3C2-203ENST00000415683 RUSC2Q8N2Y8 1516 aa7.44□□□□□ -1.22
GTF3C2-203ENST00000415683 CDAN1Q8IWY9 1227 aa7.44□□□□□ -1.22
GTF3C2-203ENST00000415683 SLAIN1Q8ND83 568 aa7.43□□□□□ -1.22
GTF3C2-203ENST00000415683 WDR70Q9NW82 654 aa7.43□□□□□ -1.22
GTF3C2-203ENST00000415683 HRCP23327 699 aa7.42□□□□□ -1.22
GTF3C2-203ENST00000415683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.42□□□□□ -1.22
GTF3C2-203ENST00000415683 MFRPQ9BY79 579 aa7.42□□□□□ -1.22
GTF3C2-203ENST00000415683 TNIKQ9UKE5 1360 aa7.42□□□□□ -1.22
GTF3C2-203ENST00000415683 UBTFP17480 764 aaKnown RBP7.41□□□□□ -1.22
GTF3C2-203ENST00000415683 ILDR1Q86SU0 546 aaPredicted RBP7.41□□□□□ -1.22
GTF3C2-203ENST00000415683 IFNL1Q8IU54 200 aa7.41□□□□□ -1.22
GTF3C2-203ENST00000415683 KDM4FA0A1W2PPD8 638 aa7.4□□□□□ -1.22
GTF3C2-203ENST00000415683 LOC105371045A0A1W2PR82 267 aa7.4□□□□□ -1.22
GTF3C2-203ENST00000415683 PLCG2P16885 1265 aa7.4□□□□□ -1.22
GTF3C2-203ENST00000415683 LMOD2Q6P5Q4 547 aa7.4□□□□□ -1.22
GTF3C2-203ENST00000415683 TMEM106CQ9BVX2 250 aa7.4□□□□□ -1.22
GTF3C2-203ENST00000415683 PCDHB8Q9UN66 801 aa7.4□□□□□ -1.22
GTF3C2-203ENST00000415683 CUL7Q14999 1698 aa7.4□□□□□ -1.23
GTF3C2-203ENST00000415683 ARID3CA6NKF2 412 aa7.39□□□□□ -1.23
GTF3C2-203ENST00000415683 ST18O60284 1047 aa7.39□□□□□ -1.23
GTF3C2-203ENST00000415683 PSEN1P49768 467 aa7.39□□□□□ -1.23
GTF3C2-203ENST00000415683 KCNH8Q96L42 1107 aa7.39□□□□□ -1.23
GTF3C2-203ENST00000415683 FBXO22Q8NEZ5 403 aa7.37□□□□□ -1.23
GTF3C2-203ENST00000415683 ARHGEF1Q92888 912 aaKnown RBP7.37□□□□□ -1.23
GTF3C2-203ENST00000415683 ATP1B4Q9UN42 357 aaPredicted RBP7.37□□□□□ -1.23
GTF3C2-203ENST00000415683 SHROOM2Q13796 1616 aa7.36□□□□□ -1.23
GTF3C2-203ENST00000415683 EEA1Q15075 1411 aa7.35□□□□□ -1.23
GTF3C2-203ENST00000415683 UACAQ9BZF9 1416 aa7.35□□□□□ -1.23
GTF3C2-203ENST00000415683 IQGAP2Q13576 1575 aa7.35□□□□□ -1.23
GTF3C2-203ENST00000415683 KIF13AQ9H1H9 1805 aa7.34□□□□□ -1.23
GTF3C2-203ENST00000415683 SOX12O15370 315 aa7.34□□□□□ -1.23
GTF3C2-203ENST00000415683 PPP1R37O75864 691 aa7.34□□□□□ -1.23
GTF3C2-203ENST00000415683 IRX5P78411 483 aaPredicted RBP7.34□□□□□ -1.23
GTF3C2-203ENST00000415683 GOLGA3Q08378 1498 aa7.34□□□□□ -1.23
GTF3C2-203ENST00000415683 PRXQ9BXM0 1461 aa7.34□□□□□ -1.23
GTF3C2-203ENST00000415683 NLRP6P59044 892 aa7.33□□□□□ -1.24
GTF3C2-203ENST00000415683 E2F4Q16254 413 aa7.32□□□□□ -1.24
GTF3C2-203ENST00000415683 DISP1Q96F81 1524 aa7.32□□□□□ -1.24
GTF3C2-203ENST00000415683 ABCC10Q5T3U5 1492 aa7.31□□□□□ -1.24
GTF3C2-203ENST00000415683 TESPA1A2RU30 521 aaPredicted RBP7.31□□□□□ -1.24
GTF3C2-203ENST00000415683 ASXL2Q76L83 1435 aa7.31□□□□□ -1.24
GTF3C2-203ENST00000415683 EFCAB3Q8N7B9 438 aa7.31□□□□□ -1.24
GTF3C2-203ENST00000415683 ABCC2Q92887 1545 aa7.31□□□□□ -1.24
GTF3C2-203ENST00000415683 UGGT2Q9NYU1 1516 aa7.31□□□□□ -1.24
GTF3C2-203ENST00000415683 PLB1Q6P1J6 1458 aa7.3□□□□□ -1.24
GTF3C2-203ENST00000415683 ZC3H15Q8WU90 426 aaKnown RBP7.3□□□□□ -1.24
GTF3C2-203ENST00000415683 OCEL1Q9H607 264 aa7.3□□□□□ -1.24
GTF3C2-203ENST00000415683 PLEKHD1A6NEE1 506 aa7.29□□□□□ -1.24
GTF3C2-203ENST00000415683 PDIA4P13667 645 aaKnown RBP7.29□□□□□ -1.24
GTF3C2-203ENST00000415683 TMEM121BQ9BXQ6 578 aaPredicted RBP7.29□□□□□ -1.24
GTF3C2-203ENST00000415683 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.29□□□□□ -1.24
GTF3C2-203ENST00000415683 PHF8Q9UPP1 1060 aa7.29□□□□□ -1.24
GTF3C2-203ENST00000415683 CDK11AQ9UQ88 783 aaPredicted RBP7.29□□□□□ -1.24
GTF3C2-203ENST00000415683 ARIH1Q9Y4X5 557 aaPredicted RBP7.29□□□□□ -1.24
GTF3C2-203ENST00000415683 UHRF1BP1LA0JNW5 1464 aa7.29□□□□□ -1.24
GTF3C2-203ENST00000415683 BRPF1P55201 1214 aaPredicted RBP7.28□□□□□ -1.24
GTF3C2-203ENST00000415683 CABP2Q9NPB3 220 aa7.28□□□□□ -1.24
GTF3C2-203ENST00000415683 MAPKBP1O60336 1514 aa7.27□□□□□ -1.25
GTF3C2-203ENST00000415683 ADCY10Q96PN6 1610 aa7.27□□□□□ -1.25
GTF3C2-203ENST00000415683 SNPHO15079 494 aa7.27□□□□□ -1.25
GTF3C2-203ENST00000415683 MMRN1Q13201 1228 aa7.27□□□□□ -1.25
GTF3C2-203ENST00000415683 MFSD10Q14728 455 aa7.27□□□□□ -1.25
GTF3C2-203ENST00000415683 MARVELD3Q96A59 401 aa7.27□□□□□ -1.25
GTF3C2-203ENST00000415683 BCL11AQ9H165 835 aa7.27□□□□□ -1.25
GTF3C2-203ENST00000415683 NCKAP5LQ9HCH0 1330 aa7.27□□□□□ -1.25
GTF3C2-203ENST00000415683 SEMA3EO15041 775 aa7.26□□□□□ -1.25
GTF3C2-203ENST00000415683 SPNS2Q8IVW8 549 aa7.26□□□□□ -1.25
GTF3C2-203ENST00000415683 KIAA0556O60303 1618 aa7.26□□□□□ -1.25
GTF3C2-203ENST00000415683 DIP2BQ9P265 1576 aa7.25□□□□□ -1.25
GTF3C2-203ENST00000415683 COL17A1Q9UMD9 1497 aaPredicted RBP7.25□□□□□ -1.25
GTF3C2-203ENST00000415683 HMGB1P09429 215 aaKnown RBP7.25□□□□□ -1.25
GTF3C2-203ENST00000415683 CDK11BP21127 795 aaKnown RBP7.25□□□□□ -1.25
GTF3C2-203ENST00000415683 KDM5BQ9UGL1 1544 aa7.25□□□□□ -1.25
GTF3C2-203ENST00000415683 FHOD3Q2V2M9 1422 aa7.25□□□□□ -1.25
GTF3C2-203ENST00000415683 TSPOAP1O95153 1857 aa7.24□□□□□ -1.25
GTF3C2-203ENST00000415683 PDE4AP27815 886 aa7.24□□□□□ -1.25
GTF3C2-203ENST00000415683 MS4A4AQ96JQ5 239 aa7.24□□□□□ -1.25
GTF3C2-203ENST00000415683 CHMP4AQ9BY43 222 aa7.24□□□□□ -1.25
GTF3C2-203ENST00000415683 CRISPLD2Q9H0B8 497 aa7.24□□□□□ -1.25
GTF3C2-203ENST00000415683 CD109Q6YHK3 1445 aa7.24□□□□□ -1.25
GTF3C2-203ENST00000415683 WDR7Q9Y4E6 1490 aa7.23□□□□□ -1.25
GTF3C2-203ENST00000415683 EPRSP07814 1512 aaKnown RBP7.22□□□□□ -1.25
GTF3C2-203ENST00000415683 ZMYND10O75800 440 aa7.22□□□□□ -1.25
GTF3C2-203ENST00000415683 CAMK2BQ13554 666 aa7.22□□□□□ -1.25
GTF3C2-203ENST00000415683 C3orf67Q6ZVT6 689 aa7.22□□□□□ -1.25
GTF3C2-203ENST00000415683 UBE2Q2Q8WVN8 375 aa7.22□□□□□ -1.25
GTF3C2-203ENST00000415683 ATP10BO94823 1461 aa7.22□□□□□ -1.25
GTF3C2-203ENST00000415683 KDM6BO15054 1643 aa7.21□□□□□ -1.26
GTF3C2-203ENST00000415683 SMYD5Q6GMV2 418 aa7.21□□□□□ -1.26
GTF3C2-203ENST00000415683 LARP6Q9BRS8 491 aaKnown RBP7.21□□□□□ -1.26
GTF3C2-203ENST00000415683 MYT1LQ9UL68 1186 aa7.21□□□□□ -1.26
GTF3C2-203ENST00000415683 CCDC9Q9Y3X0 531 aaKnown RBP7.21□□□□□ -1.26
GTF3C2-203ENST00000415683 TEX14Q8IWB6 1497 aa7.21□□□□□ -1.26
GTF3C2-203ENST00000415683 GOLGA2Q08379 1002 aa7.2□□□□□ -1.26
GTF3C2-203ENST00000415683 PDCD7Q8N8D1 485 aaKnown RBP7.2□□□□□ -1.26
GTF3C2-203ENST00000415683 SLC24A3Q9HC58 644 aa7.2□□□□□ -1.26
GTF3C2-203ENST00000415683 ARID4BQ4LE39 1312 aaPredicted RBP7.2□□□□□ -1.26
GTF3C2-203ENST00000415683 CTTNBP2Q8WZ74 1663 aa7.19□□□□□ -1.26
GTF3C2-203ENST00000415683 RAPGEF3O95398 923 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms