RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 THOC2Q8NI27 1593 aaKnown RBP10.22□□□□□ -0.77
SIK3-203ENST00000415541 PTPN23Q9H3S7 1636 aa10.22□□□□□ -0.77
SIK3-203ENST00000415541 MIA2Q96PC5 1412 aa10.21□□□□□ -0.77
SIK3-203ENST00000415541 NAIPQ13075 1403 aa10.2□□□□□ -0.78
SIK3-203ENST00000415541 ANKRD50Q9ULJ7 1429 aa10.2□□□□□ -0.78
SIK3-203ENST00000415541 SUPT6HQ7KZ85 1726 aaKnown RBP10.2□□□□□ -0.78
SIK3-203ENST00000415541 HFM1A2PYH4 1435 aa10.2□□□□□ -0.78
SIK3-203ENST00000415541 NUP153P49790 1475 aaKnown RBP10.2□□□□□ -0.78
SIK3-203ENST00000415541 FGD1P98174 961 aa10.2□□□□□ -0.78
SIK3-203ENST00000415541 FAM69CQ0P6D2 419 aa10.19□□□□□ -0.78
SIK3-203ENST00000415541 KANK1Q14678 1352 aa10.19□□□□□ -0.78
SIK3-203ENST00000415541 ARHGAP5Q13017 1502 aa10.19□□□□□ -0.78
SIK3-203ENST00000415541 MAGI3Q5TCQ9 1506 aa10.19□□□□□ -0.78
SIK3-203ENST00000415541 PBRM1Q86U86 1689 aa10.18□□□□□ -0.78
SIK3-203ENST00000415541 TMC1Q8TDI8 760 aa10.18□□□□□ -0.78
SIK3-203ENST00000415541 DISP1Q96F81 1524 aa10.18□□□□□ -0.78
SIK3-203ENST00000415541 AAMPQ13685 434 aa10.18□□□□□ -0.78
SIK3-203ENST00000415541 DAPK1P53355 1430 aa10.18□□□□□ -0.78
SIK3-203ENST00000415541 UGGT2Q9NYU1 1516 aa10.18□□□□□ -0.78
SIK3-203ENST00000415541 ATP10BO94823 1461 aa10.17□□□□□ -0.78
SIK3-203ENST00000415541 BACH2Q9BYV9 841 aa10.17□□□□□ -0.78
SIK3-203ENST00000415541 NUTM2DQ5VT03 806 aaPredicted RBP10.17□□□□□ -0.78
SIK3-203ENST00000415541 DENND4BO75064 1496 aaPredicted RBP10.17□□□□□ -0.78
SIK3-203ENST00000415541 NUP160Q12769 1436 aa10.16□□□□□ -0.78
SIK3-203ENST00000415541 ABCC5O15440 1437 aa10.16□□□□□ -0.78
SIK3-203ENST00000415541 C9orf84Q5VXU9 1444 aa10.16□□□□□ -0.78
SIK3-203ENST00000415541 NUDCQ9Y266 331 aa10.15□□□□□ -0.78
SIK3-203ENST00000415541 KIAA0556O60303 1618 aa10.15□□□□□ -0.78
SIK3-203ENST00000415541 RAPGEF3O95398 923 aa10.14□□□□□ -0.79
SIK3-203ENST00000415541 SMG6Q86US8 1419 aaKnown RBP10.14□□□□□ -0.79
SIK3-203ENST00000415541 CALD1Q05682 793 aaKnown RBP10.14□□□□□ -0.79
SIK3-203ENST00000415541 PDCL3Q9H2J4 239 aa10.14□□□□□ -0.79
SIK3-203ENST00000415541 NCLP19338 710 aaKnown RBP10.13□□□□□ -0.79
SIK3-203ENST00000415541 SAFB2Q14151 953 aaKnown RBP eCLIP10.13□□□□□ -0.79
SIK3-203ENST00000415541 RRAGDQ9NQL2 400 aaPredicted RBP10.13□□□□□ -0.79
SIK3-203ENST00000415541 KDM6BO15054 1643 aa10.13□□□□□ -0.79
SIK3-203ENST00000415541 CEP170Q5SW79 1584 aa10.13□□□□□ -0.79
SIK3-203ENST00000415541 RAPGEF6Q8TEU7 1601 aa10.13□□□□□ -0.79
SIK3-203ENST00000415541 CLCN1P35523 988 aa10.13□□□□□ -0.79
SIK3-203ENST00000415541 TPM2P07951 284 aa10.12□□□□□ -0.79
SIK3-203ENST00000415541 SCAPERQ9BY12 1400 aa10.12□□□□□ -0.79
SIK3-203ENST00000415541 GPATCH8Q9UKJ3 1502 aaKnown RBP10.12□□□□□ -0.79
SIK3-203ENST00000415541 ROCK2O75116 1388 aaKnown RBP10.12□□□□□ -0.79
SIK3-203ENST00000415541 CCDC144AA2RUR9 1427 aa10.12□□□□□ -0.79
SIK3-203ENST00000415541 CAMSAP2Q08AD1 1489 aa10.12□□□□□ -0.79
SIK3-203ENST00000415541 ST20-MTHFSA0A0A6YYL1 179 aa10.12□□□□□ -0.79
SIK3-203ENST00000415541 PDIA4P13667 645 aaKnown RBP10.12□□□□□ -0.79
SIK3-203ENST00000415541 GCC2Q8IWJ2 1684 aa10.12□□□□□ -0.79
SIK3-203ENST00000415541 TCOF1Q13428 1488 aaKnown RBP10.11□□□□□ -0.79
SIK3-203ENST00000415541 CENPJQ9HC77 1338 aaPredicted RBP10.11□□□□□ -0.79
SIK3-203ENST00000415541 NBPF8Q3BBV2 869 aa10.11□□□□□ -0.79
SIK3-203ENST00000415541 CC2D1BQ5T0F9 858 aaKnown RBP10.1□□□□□ -0.79
SIK3-203ENST00000415541 STK26Q9P289 416 aa10.1□□□□□ -0.79
SIK3-203ENST00000415541 NCOA1Q15788 1441 aa10.1□□□□□ -0.79
SIK3-203ENST00000415541 RNF123Q5XPI4 1314 aa10.09□□□□□ -0.79
SIK3-203ENST00000415541 FRAT2O75474 233 aaPredicted RBP10.09□□□□□ -0.79
SIK3-203ENST00000415541 TMF1P82094 1093 aa10.07□□□□□ -0.8
SIK3-203ENST00000415541 AKNAQ7Z591 1439 aa10.07□□□□□ -0.8
SIK3-203ENST00000415541 ROCK1Q13464 1354 aa10.07□□□□□ -0.8
SIK3-203ENST00000415541 MAP7D2Q96T17 732 aa10.07□□□□□ -0.8
SIK3-203ENST00000415541 KNSTRNQ9Y448 316 aa10.07□□□□□ -0.8
SIK3-203ENST00000415541 TNNT2P45379 298 aaPredicted RBP10.06□□□□□ -0.8
SIK3-203ENST00000415541 KIF14Q15058 1648 aa10.06□□□□□ -0.8
SIK3-203ENST00000415541 GOLGA6L3A6NEY3 463 aa10.06□□□□□ -0.8
SIK3-203ENST00000415541 PRKRIP1Q9H875 184 aaPredicted RBP10.06□□□□□ -0.8
SIK3-203ENST00000415541 POGKQ9P215 609 aa10.06□□□□□ -0.8
SIK3-203ENST00000415541 USP47Q96K76 1375 aa10.05□□□□□ -0.8
SIK3-203ENST00000415541 KIAA1107Q9UPP5 1409 aa10.04□□□□□ -0.8
SIK3-203ENST00000415541 SLC4A3P48751 1232 aa10.04□□□□□ -0.8
SIK3-203ENST00000415541 NBPF1Q3BBV0 1214 aa10.04□□□□□ -0.8
SIK3-203ENST00000415541 CCDC141Q6ZP82 1450 aa10.04□□□□□ -0.8
SIK3-203ENST00000415541 TRAK1Q9UPV9 953 aa10.04□□□□□ -0.8
SIK3-203ENST00000415541 CDCA8Q53HL2 280 aa10.04□□□□□ -0.8
SIK3-203ENST00000415541 TRIM44Q96DX7 344 aaPredicted RBP10.04□□□□□ -0.8
SIK3-203ENST00000415541 CNTLNQ9NXG0 1405 aa10.04□□□□□ -0.8
SIK3-203ENST00000415541 ANKRD30BQ9BXX2 1392 aa10.03□□□□□ -0.8
SIK3-203ENST00000415541 CD109Q6YHK3 1445 aa10.03□□□□□ -0.8
SIK3-203ENST00000415541 WDR43Q15061 677 aaKnown RBP eCLIP10.03□□□□□ -0.8
SIK3-203ENST00000415541 BECN1Q14457 450 aa10.02□□□□□ -0.81
SIK3-203ENST00000415541 PLEKHH2Q8IVE3 1493 aa10.02□□□□□ -0.81
SIK3-203ENST00000415541 RGS3P49796 1198 aa10.01□□□□□ -0.81
SIK3-203ENST00000415541 BCL11BQ9C0K0 894 aaPredicted RBP10.01□□□□□ -0.81
SIK3-203ENST00000415541 CCDC184Q52MB2 194 aa10.01□□□□□ -0.81
SIK3-203ENST00000415541 TAF7LQ5H9L4 462 aa10.01□□□□□ -0.81
SIK3-203ENST00000415541 RRP1P56182 461 aaKnown RBP10□□□□□ -0.81
SIK3-203ENST00000415541 KIF7Q2M1P5 1343 aa10□□□□□ -0.81
SIK3-203ENST00000415541 ASXL2Q76L83 1435 aa10□□□□□ -0.81
SIK3-203ENST00000415541 SRPK2P78362 688 aaKnown RBP10□□□□□ -0.81
SIK3-203ENST00000415541 EXOC6Q8TAG9 804 aa10□□□□□ -0.81
SIK3-203ENST00000415541 PRDM4Q9UKN5 801 aa9.99□□□□□ -0.81
SIK3-203ENST00000415541 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
SIK3-203ENST00000415541 CANXP27824 592 aaKnown RBP9.99□□□□□ -0.81
SIK3-203ENST00000415541 CFAP70Q5T0N1 1121 aa9.99□□□□□ -0.81
SIK3-203ENST00000415541 FANCAO15360 1455 aa9.98□□□□□ -0.81
SIK3-203ENST00000415541 ADGRL1O94910 1474 aa9.98□□□□□ -0.81
SIK3-203ENST00000415541 TEX14Q8IWB6 1497 aa9.98□□□□□ -0.81
SIK3-203ENST00000415541 ESPNB1AK53 854 aa9.98□□□□□ -0.81
SIK3-203ENST00000415541 TMEM132EQ6IEE7 984 aa9.98□□□□□ -0.81
SIK3-203ENST00000415541 MTERF4Q7Z6M4 381 aaKnown RBP9.98□□□□□ -0.81
SIK3-203ENST00000415541 ERCC6L2Q5T890 1561 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms