RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.98■□□□□ 0.79
PRKD1-202ENST00000415220 MSH5O43196 834 aa19.98■□□□□ 0.79
PRKD1-202ENST00000415220 ARHGAP5Q13017 1502 aa19.97■□□□□ 0.79
PRKD1-202ENST00000415220 ROCK2O75116 1388 aaKnown RBP19.96■□□□□ 0.79
PRKD1-202ENST00000415220 PLA2R1Q13018 1463 aa19.96■□□□□ 0.79
PRKD1-202ENST00000415220 NBPF1Q3BBV0 1214 aa19.96■□□□□ 0.79
PRKD1-202ENST00000415220 PNISRQ8TF01 805 aaKnown RBP19.95■□□□□ 0.78
PRKD1-202ENST00000415220 ARID4BQ4LE39 1312 aaPredicted RBP19.95■□□□□ 0.78
PRKD1-202ENST00000415220 TRPM1Q7Z4N2 1603 aa19.93■□□□□ 0.78
PRKD1-202ENST00000415220 E9PCH4 1651 aa19.93■□□□□ 0.78
PRKD1-202ENST00000415220 SMG6Q86US8 1419 aaKnown RBP19.93■□□□□ 0.78
PRKD1-202ENST00000415220 PRAG1Q86YV5 1406 aa19.92■□□□□ 0.78
PRKD1-202ENST00000415220 CCDC144AA2RUR9 1427 aa19.92■□□□□ 0.78
PRKD1-202ENST00000415220 PLEKHH2Q8IVE3 1493 aa19.91■□□□□ 0.78
PRKD1-202ENST00000415220 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
PRKD1-202ENST00000415220 ERICH6BQ5W0A0 696 aa19.91■□□□□ 0.78
PRKD1-202ENST00000415220 TMC1Q8TDI8 760 aa19.91■□□□□ 0.78
PRKD1-202ENST00000415220 UNC13BO14795 1591 aa19.9■□□□□ 0.78
PRKD1-202ENST00000415220 A2MP01023 1474 aa19.89■□□□□ 0.78
PRKD1-202ENST00000415220 NUDCQ9Y266 331 aa19.89■□□□□ 0.77
PRKD1-202ENST00000415220 MYO5CQ9NQX4 1742 aa19.88■□□□□ 0.77
PRKD1-202ENST00000415220 MAST1Q9Y2H9 1570 aa19.88■□□□□ 0.77
PRKD1-202ENST00000415220 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
PRKD1-202ENST00000415220 RSPH4AQ5TD94 716 aa19.85■□□□□ 0.77
PRKD1-202ENST00000415220 MYBBP1AQ9BQG0 1328 aaKnown RBP19.84■□□□□ 0.77
PRKD1-202ENST00000415220 LRPPRCP42704 1394 aaKnown RBP19.84■□□□□ 0.77
PRKD1-202ENST00000415220 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.77
PRKD1-202ENST00000415220 SALL2Q9Y467 1007 aaPredicted RBP19.83■□□□□ 0.76
PRKD1-202ENST00000415220 DISP3Q9P2K9 1392 aa19.83■□□□□ 0.76
PRKD1-202ENST00000415220 PLXNC1O60486 1568 aa19.83■□□□□ 0.76
PRKD1-202ENST00000415220 RNF123Q5XPI4 1314 aa19.81■□□□□ 0.76
PRKD1-202ENST00000415220 BRD4O60885 1362 aaPredicted RBP19.8■□□□□ 0.76
PRKD1-202ENST00000415220 TESK2Q96S53 571 aa19.79■□□□□ 0.76
PRKD1-202ENST00000415220 ZCCHC11Q5TAX3 1644 aaKnown RBP19.79■□□□□ 0.76
PRKD1-202ENST00000415220 PER1O15534 1290 aaPredicted RBP19.79■□□□□ 0.76
PRKD1-202ENST00000415220 FANCIQ9NVI1 1328 aa19.78■□□□□ 0.76
PRKD1-202ENST00000415220 RALBP1Q15311 655 aa19.78■□□□□ 0.76
PRKD1-202ENST00000415220 TRAPPC8Q9Y2L5 1435 aa19.78■□□□□ 0.76
PRKD1-202ENST00000415220 PRDM15P57071 1507 aaPredicted RBP19.78■□□□□ 0.76
PRKD1-202ENST00000415220 GPRASP1Q5JY77 1395 aa19.77■□□□□ 0.76
PRKD1-202ENST00000415220 CC2D1BQ5T0F9 858 aaKnown RBP19.77■□□□□ 0.76
PRKD1-202ENST00000415220 PARD3Q8TEW0 1356 aa19.77■□□□□ 0.76
PRKD1-202ENST00000415220 DUOX2Q9NRD8 1548 aa19.77■□□□□ 0.76
PRKD1-202ENST00000415220 COL17A1Q9UMD9 1497 aaPredicted RBP19.77■□□□□ 0.75
PRKD1-202ENST00000415220 MAGI2Q86UL8 1455 aa19.75■□□□□ 0.75
PRKD1-202ENST00000415220 PLCH2O75038 1416 aa19.75■□□□□ 0.75
PRKD1-202ENST00000415220 KTN1Q86UP2 1357 aaKnown RBP19.74■□□□□ 0.75
PRKD1-202ENST00000415220 ABCC1P33527 1531 aa19.73■□□□□ 0.75
PRKD1-202ENST00000415220 ERBINQ96RT1 1412 aa19.72■□□□□ 0.75
PRKD1-202ENST00000415220 PANK3Q9H999 370 aa19.72■□□□□ 0.75
PRKD1-202ENST00000415220 LAMC1P11047 1609 aa19.71■□□□□ 0.75
PRKD1-202ENST00000415220 AFAP1Q8N556 730 aa19.71■□□□□ 0.75
PRKD1-202ENST00000415220 NLRP13Q86W25 1043 aa19.71■□□□□ 0.75
PRKD1-202ENST00000415220 CCDC136Q96JN2 1154 aa19.71■□□□□ 0.75
PRKD1-202ENST00000415220 ATP10AO60312 1499 aa19.69■□□□□ 0.74
PRKD1-202ENST00000415220 EFCAB2Q5VUJ9 269 aa19.69■□□□□ 0.74
PRKD1-202ENST00000415220 CDCA7LQ96GN5 454 aa19.69■□□□□ 0.74
PRKD1-202ENST00000415220 EIF2AK4Q9P2K8 1649 aaKnown RBP19.68■□□□□ 0.74
PRKD1-202ENST00000415220 RNF17Q9BXT8 1623 aaKnown RBP19.67■□□□□ 0.74
PRKD1-202ENST00000415220 CLASP1Q7Z460 1538 aa19.67■□□□□ 0.74
PRKD1-202ENST00000415220 MADDQ8WXG6 1647 aa19.65■□□□□ 0.74
PRKD1-202ENST00000415220 RRP1P56182 461 aaKnown RBP19.64■□□□□ 0.73
PRKD1-202ENST00000415220 EXOC6Q8TAG9 804 aa19.64■□□□□ 0.73
PRKD1-202ENST00000415220 ZFYVE16Q7Z3T8 1539 aa19.63■□□□□ 0.73
PRKD1-202ENST00000415220 SPAG9O60271 1321 aaKnown RBP19.63■□□□□ 0.73
PRKD1-202ENST00000415220 TMF1P82094 1093 aa19.63■□□□□ 0.73
PRKD1-202ENST00000415220 CLTCL1P53675 1640 aa19.61■□□□□ 0.73
PRKD1-202ENST00000415220 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
PRKD1-202ENST00000415220 UHRF1BP1LA0JNW5 1464 aa19.61■□□□□ 0.73
PRKD1-202ENST00000415220 WDR7Q9Y4E6 1490 aa19.6■□□□□ 0.73
PRKD1-202ENST00000415220 IQGAP1P46940 1657 aa19.59■□□□□ 0.73
PRKD1-202ENST00000415220 SPHKAPQ2M3C7 1700 aa19.59■□□□□ 0.73
PRKD1-202ENST00000415220 PLIN1O60240 522 aa19.58■□□□□ 0.73
PRKD1-202ENST00000415220 TRPM2O94759 1503 aa19.58■□□□□ 0.73
PRKD1-202ENST00000415220 CEP152O94986 1710 aa19.58■□□□□ 0.72
PRKD1-202ENST00000415220 BLMP54132 1417 aaPredicted RBP19.57■□□□□ 0.72
PRKD1-202ENST00000415220 ERICH6Q7L0X2 663 aa19.56■□□□□ 0.72
PRKD1-202ENST00000415220 UGGT1Q9NYU2 1555 aa19.56■□□□□ 0.72
PRKD1-202ENST00000415220 DEPDC5O75140 1603 aa19.54■□□□□ 0.72
PRKD1-202ENST00000415220 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
PRKD1-202ENST00000415220 ADAMTS8Q9UP79 889 aa19.54■□□□□ 0.72
PRKD1-202ENST00000415220 WASHC2CQ9Y4E1 1318 aa19.54■□□□□ 0.72
PRKD1-202ENST00000415220 PTPRTO14522 1441 aa19.53■□□□□ 0.72
PRKD1-202ENST00000415220 RTEL1-TNFRSF6BF6WH68 1400 aa19.52■□□□□ 0.72
PRKD1-202ENST00000415220 ATP7AQ04656 1500 aa19.52■□□□□ 0.71
PRKD1-202ENST00000415220 KIF3BO15066 747 aa19.51■□□□□ 0.71
PRKD1-202ENST00000415220 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
PRKD1-202ENST00000415220 FANCAO15360 1455 aa19.51■□□□□ 0.71
PRKD1-202ENST00000415220 SKAP1Q86WV1 359 aa19.51■□□□□ 0.71
PRKD1-202ENST00000415220 MYOM1P52179 1685 aa19.51■□□□□ 0.71
PRKD1-202ENST00000415220 INO80Q9ULG1 1556 aaPredicted RBP19.51■□□□□ 0.71
PRKD1-202ENST00000415220 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
PRKD1-202ENST00000415220 AMER1Q5JTC6 1135 aaPredicted RBP19.5■□□□□ 0.71
PRKD1-202ENST00000415220 SCAPERQ9BY12 1400 aa19.5■□□□□ 0.71
PRKD1-202ENST00000415220 TET3O43151 1660 aa19.5■□□□□ 0.71
PRKD1-202ENST00000415220 PDE3BQ13370 1112 aa19.5■□□□□ 0.71
PRKD1-202ENST00000415220 ABCA9Q8IUA7 1624 aa19.5■□□□□ 0.71
PRKD1-202ENST00000415220 SCAF11Q99590 1463 aaKnown RBP19.49■□□□□ 0.71
PRKD1-202ENST00000415220 KNSTRNQ9Y448 316 aa19.48■□□□□ 0.71
PRKD1-202ENST00000415220 ZMYM4Q5VZL5 1548 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms