RNA–Protein interactions for RNA: ENST00000414044.1

VTA1P1-201, Transcript of vesicle trafficking 1 pseudogene 1, humanhuman

BASIC

Gene VTA1P1, Length 866 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P1-201ENST00000414044 E2F4Q16254 413 aa10.07□□□□□ -0.8
VTA1P1-201ENST00000414044 PHF14O94880 888 aa10.06□□□□□ -0.8
VTA1P1-201ENST00000414044 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
VTA1P1-201ENST00000414044 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
VTA1P1-201ENST00000414044 HCSTQ9UBK5 93 aa10.05□□□□□ -0.8
VTA1P1-201ENST00000414044 PCDHGA10Q9Y5H3 936 aa10.05□□□□□ -0.8
VTA1P1-201ENST00000414044 SPDYE16A6NNV3 312 aaPredicted RBP10.03□□□□□ -0.8
VTA1P1-201ENST00000414044 EPAS1Q99814 870 aa10.03□□□□□ -0.8
VTA1P1-201ENST00000414044 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
VTA1P1-201ENST00000414044 PPP1R3GB7ZBB8 358 aa10.01□□□□□ -0.81
VTA1P1-201ENST00000414044 BHMG1C9JSJ3 638 aaPredicted RBP10.01□□□□□ -0.81
VTA1P1-201ENST00000414044 PDIA6Q15084 440 aa10.01□□□□□ -0.81
VTA1P1-201ENST00000414044 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
VTA1P1-201ENST00000414044 NBPF3Q9H094 633 aa9.97□□□□□ -0.81
VTA1P1-201ENST00000414044 P3H3Q8IVL6 736 aa9.96□□□□□ -0.82
VTA1P1-201ENST00000414044 ONECUT3O60422 494 aaPredicted RBP9.95□□□□□ -0.82
VTA1P1-201ENST00000414044 DDX12PQ92771 950 aa9.95□□□□□ -0.82
VTA1P1-201ENST00000414044 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
VTA1P1-201ENST00000414044 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
VTA1P1-201ENST00000414044 MRPL50Q8N5N7 158 aaKnown RBP9.94□□□□□ -0.82
VTA1P1-201ENST00000414044 RABGEF1Q9UJ41 708 aa9.94□□□□□ -0.82
VTA1P1-201ENST00000414044 C6orf132Q5T0Z8 1188 aa9.93□□□□□ -0.82
VTA1P1-201ENST00000414044 MAP3K7O43318 606 aa9.91□□□□□ -0.82
VTA1P1-201ENST00000414044 COL9A1P20849 921 aa9.91□□□□□ -0.82
VTA1P1-201ENST00000414044 RBM33Q96EV2 1170 aaKnown RBP9.91□□□□□ -0.82
VTA1P1-201ENST00000414044 EN1Q05925 392 aaPredicted RBP9.9□□□□□ -0.82
VTA1P1-201ENST00000414044 LAPTM4BQ86VI4 370 aa9.9□□□□□ -0.82
VTA1P1-201ENST00000414044 THSD4Q6ZMP0 1018 aa9.89□□□□□ -0.83
VTA1P1-201ENST00000414044 PLA2G2EQ9NZK7 142 aa9.88□□□□□ -0.83
VTA1P1-201ENST00000414044 GRXCR2A6NFK2 248 aa9.87□□□□□ -0.83
VTA1P1-201ENST00000414044 PROX2Q3B8N5 592 aa9.87□□□□□ -0.83
VTA1P1-201ENST00000414044 ARHGEF1Q92888 912 aaKnown RBP9.87□□□□□ -0.83
VTA1P1-201ENST00000414044 WNT2BQ93097 391 aa9.87□□□□□ -0.83
VTA1P1-201ENST00000414044 CERKQ8TCT0 537 aa9.86□□□□□ -0.83
VTA1P1-201ENST00000414044 TRIM6-TRIM34B2RNG4 842 aa9.85□□□□□ -0.83
VTA1P1-201ENST00000414044 KCNV2Q8TDN2 545 aa9.84□□□□□ -0.83
VTA1P1-201ENST00000414044 KIAA1468Q9P260 1216 aa9.84□□□□□ -0.83
VTA1P1-201ENST00000414044 PTPN5P54829 565 aa9.83□□□□□ -0.84
VTA1P1-201ENST00000414044 ANKK1Q8NFD2 765 aa9.83□□□□□ -0.84
VTA1P1-201ENST00000414044 IFFO2Q5TF58 517 aa9.82□□□□□ -0.84
VTA1P1-201ENST00000414044 TSR1Q2NL82 804 aaKnown RBP9.81□□□□□ -0.84
VTA1P1-201ENST00000414044 PACS2Q86VP3 889 aa9.81□□□□□ -0.84
VTA1P1-201ENST00000414044 FAM98CQ17RN3 349 aaKnown RBP9.79□□□□□ -0.84
VTA1P1-201ENST00000414044 ZFRQ96KR1 1074 aaKnown RBP9.79□□□□□ -0.84
VTA1P1-201ENST00000414044 SOWAHBA6NEL2 793 aa9.78□□□□□ -0.84
VTA1P1-201ENST00000414044 OSBPP22059 807 aa9.78□□□□□ -0.84
VTA1P1-201ENST00000414044 NYAP1Q6ZVC0 841 aa9.78□□□□□ -0.84
VTA1P1-201ENST00000414044 LMOD2Q6P5Q4 547 aa9.77□□□□□ -0.85
VTA1P1-201ENST00000414044 PRSS12P56730 875 aa9.76□□□□□ -0.85
VTA1P1-201ENST00000414044 CDCA7LQ96GN5 454 aa9.76□□□□□ -0.85
VTA1P1-201ENST00000414044 RBM27Q9P2N5 1060 aaKnown RBP9.76□□□□□ -0.85
VTA1P1-201ENST00000414044 TSKSQ9UJT2 592 aa9.76□□□□□ -0.85
VTA1P1-201ENST00000414044 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
VTA1P1-201ENST00000414044 GTF3C3Q9Y5Q9 886 aa9.76□□□□□ -0.85
VTA1P1-201ENST00000414044 NBPF26B4DH59 902 aa9.75□□□□□ -0.85
VTA1P1-201ENST00000414044 PRIM1P49642 420 aaKnown RBP9.75□□□□□ -0.85
VTA1P1-201ENST00000414044 TMEM132AQ24JP5 1023 aa9.75□□□□□ -0.85
VTA1P1-201ENST00000414044 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.75□□□□□ -0.85
VTA1P1-201ENST00000414044 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
VTA1P1-201ENST00000414044 TULP1O00294 542 aaPredicted RBP9.74□□□□□ -0.85
VTA1P1-201ENST00000414044 LRCH3Q96II8 777 aa9.72□□□□□ -0.85
VTA1P1-201ENST00000414044 BCAMP50895 628 aa9.71□□□□□ -0.86
VTA1P1-201ENST00000414044 CDHR5Q9HBB8 845 aa9.71□□□□□ -0.86
VTA1P1-201ENST00000414044 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.71□□□□□ -0.86
VTA1P1-201ENST00000414044 RGS20O76081 388 aa9.7□□□□□ -0.86
VTA1P1-201ENST00000414044 ITGBL1O95965 494 aaPredicted RBP9.7□□□□□ -0.86
VTA1P1-201ENST00000414044 MLLT3P42568 568 aaPredicted RBP9.69□□□□□ -0.86
VTA1P1-201ENST00000414044 ERICH6Q7L0X2 663 aa9.69□□□□□ -0.86
VTA1P1-201ENST00000414044 TSR3Q9UJK0 312 aaKnown RBP9.69□□□□□ -0.86
VTA1P1-201ENST00000414044 HDGFP51858 240 aaKnown RBP9.68□□□□□ -0.86
VTA1P1-201ENST00000414044 PNMA3Q9UL41 463 aa9.68□□□□□ -0.86
VTA1P1-201ENST00000414044 SMYD5Q6GMV2 418 aa9.67□□□□□ -0.86
VTA1P1-201ENST00000414044 TTC13Q8NBP0 860 aa9.67□□□□□ -0.86
VTA1P1-201ENST00000414044 TATDN2Q93075 761 aa9.67□□□□□ -0.86
VTA1P1-201ENST00000414044 FAM198AQ9UFP1 575 aa9.67□□□□□ -0.86
VTA1P1-201ENST00000414044 NPDC1Q9NQX5 325 aaPredicted RBP9.66□□□□□ -0.86
VTA1P1-201ENST00000414044 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
VTA1P1-201ENST00000414044 HPS5Q9UPZ3 1129 aa9.65□□□□□ -0.86
VTA1P1-201ENST00000414044 A0A0G2JS52 829 aa9.64□□□□□ -0.87
VTA1P1-201ENST00000414044 SLC4A3P48751 1232 aa9.64□□□□□ -0.87
VTA1P1-201ENST00000414044 PADI6Q6TGC4 694 aa9.64□□□□□ -0.87
VTA1P1-201ENST00000414044 NECTIN2Q92692 538 aa9.64□□□□□ -0.87
VTA1P1-201ENST00000414044 NUTM2FA1L443 756 aa9.63□□□□□ -0.87
VTA1P1-201ENST00000414044 SMAPO00193 183 aa9.63□□□□□ -0.87
VTA1P1-201ENST00000414044 SEMA3EO15041 775 aa9.63□□□□□ -0.87
VTA1P1-201ENST00000414044 NUDT18Q6ZVK8 323 aa9.63□□□□□ -0.87
VTA1P1-201ENST00000414044 PPP4CP60510 307 aa9.62□□□□□ -0.87
VTA1P1-201ENST00000414044 TESPA1A2RU30 521 aaPredicted RBP9.61□□□□□ -0.87
VTA1P1-201ENST00000414044 PTGDRQ13258 359 aa9.61□□□□□ -0.87
VTA1P1-201ENST00000414044 SAMD7Q7Z3H4 446 aa9.61□□□□□ -0.87
VTA1P1-201ENST00000414044 C3orf80F5H4A9 247 aa9.6□□□□□ -0.87
VTA1P1-201ENST00000414044 ZC3H15Q8WU90 426 aaKnown RBP9.6□□□□□ -0.87
VTA1P1-201ENST00000414044 RNF40O75150 1001 aa9.59□□□□□ -0.87
VTA1P1-201ENST00000414044 FCHSD2O94868 740 aa9.59□□□□□ -0.87
VTA1P1-201ENST00000414044 BRPF1P55201 1214 aaPredicted RBP9.59□□□□□ -0.87
VTA1P1-201ENST00000414044 KCNC4Q03721 635 aa9.59□□□□□ -0.87
VTA1P1-201ENST00000414044 SLF2Q8IX21 1173 aa9.58□□□□□ -0.88
VTA1P1-201ENST00000414044 RBM46Q8TBY0 533 aaKnown RBP9.57□□□□□ -0.88
VTA1P1-201ENST00000414044 EYA1Q99502 592 aa9.56□□□□□ -0.88
VTA1P1-201ENST00000414044 DNAJB2P25686 324 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms