RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 RNF123Q5XPI4 1314 aa11.94□□□□□ -0.5
SIK3-202ENST00000413553 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
SIK3-202ENST00000413553 CDC42BPBQ9Y5S2 1711 aa11.94□□□□□ -0.5
SIK3-202ENST00000413553 PREX2Q70Z35 1606 aa11.94□□□□□ -0.5
SIK3-202ENST00000413553 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
SIK3-202ENST00000413553 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
SIK3-202ENST00000413553 MYO5CQ9NQX4 1742 aa11.94□□□□□ -0.5
SIK3-202ENST00000413553 ZNF326Q5BKZ1 582 aaKnown RBP11.93□□□□□ -0.5
SIK3-202ENST00000413553 TEX14Q8IWB6 1497 aa11.93□□□□□ -0.5
SIK3-202ENST00000413553 SPATA31E1Q6ZUB1 1445 aa11.92□□□□□ -0.5
SIK3-202ENST00000413553 NEFMP07197 916 aa11.92□□□□□ -0.5
SIK3-202ENST00000413553 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
SIK3-202ENST00000413553 TMC1Q8TDI8 760 aa11.92□□□□□ -0.5
SIK3-202ENST00000413553 SAMD9LQ8IVG5 1584 aa11.92□□□□□ -0.5
SIK3-202ENST00000413553 SYCP2Q9BX26 1530 aa11.91□□□□□ -0.5
SIK3-202ENST00000413553 ANKRD30BQ9BXX2 1392 aa11.91□□□□□ -0.5
SIK3-202ENST00000413553 DHX29Q7Z478 1369 aaKnown RBP11.91□□□□□ -0.5
SIK3-202ENST00000413553 PLEKHH2Q8IVE3 1493 aa11.91□□□□□ -0.5
SIK3-202ENST00000413553 ANKRD50Q9ULJ7 1429 aa11.91□□□□□ -0.5
SIK3-202ENST00000413553 KIF15Q9NS87 1388 aa11.9□□□□□ -0.5
SIK3-202ENST00000413553 MBD5Q9P267 1494 aa11.9□□□□□ -0.5
SIK3-202ENST00000413553 AFAP1Q8N556 730 aa11.9□□□□□ -0.51
SIK3-202ENST00000413553 BCORL1Q5H9F3 1711 aa11.88□□□□□ -0.51
SIK3-202ENST00000413553 FANCAO15360 1455 aa11.88□□□□□ -0.51
SIK3-202ENST00000413553 EXOC6Q8TAG9 804 aa11.88□□□□□ -0.51
SIK3-202ENST00000413553 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
SIK3-202ENST00000413553 USP47Q96K76 1375 aa11.88□□□□□ -0.51
SIK3-202ENST00000413553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.88□□□□□ -0.512e-7■■□□□ 12.5
SIK3-202ENST00000413553 SHANK2Q9UPX8 1470 aa11.87□□□□□ -0.51
SIK3-202ENST00000413553 SPAG9O60271 1321 aaKnown RBP11.87□□□□□ -0.51
SIK3-202ENST00000413553 RIMBP3CA6NJZ7 1639 aa11.87□□□□□ -0.51
SIK3-202ENST00000413553 RIMBP3BA6NNM3 1639 aa11.87□□□□□ -0.51
SIK3-202ENST00000413553 RIMBP3Q9UFD9 1639 aa11.87□□□□□ -0.51
SIK3-202ENST00000413553 TCERG1O14776 1098 aaKnown RBP11.87□□□□□ -0.51
SIK3-202ENST00000413553 ADGRL2O95490 1459 aa11.87□□□□□ -0.51
SIK3-202ENST00000413553 ARHGEF5Q12774 1597 aa11.87□□□□□ -0.51
SIK3-202ENST00000413553 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
SIK3-202ENST00000413553 PDE4AP27815 886 aa11.87□□□□□ -0.51
SIK3-202ENST00000413553 RRP1P56182 461 aaKnown RBP11.87□□□□□ -0.51
SIK3-202ENST00000413553 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
SIK3-202ENST00000413553 NUP155O75694 1391 aa11.87□□□□□ -0.51
SIK3-202ENST00000413553 CD109Q6YHK3 1445 aa11.86□□□□□ -0.51
SIK3-202ENST00000413553 CROCC2H7BZ55 1655 aa11.86□□□□□ -0.51
SIK3-202ENST00000413553 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
SIK3-202ENST00000413553 USP35Q9P2H5 1018 aa11.85□□□□□ -0.51
SIK3-202ENST00000413553 SCAPERQ9BY12 1400 aa11.84□□□□□ -0.51
SIK3-202ENST00000413553 TRAPPC8Q9Y2L5 1435 aa11.84□□□□□ -0.51
SIK3-202ENST00000413553 ARHGEF12Q9NZN5 1544 aa11.84□□□□□ -0.51
SIK3-202ENST00000413553 PKD2Q13563 968 aa11.84□□□□□ -0.51
SIK3-202ENST00000413553 ADGRL1O94910 1474 aa11.83□□□□□ -0.51
SIK3-202ENST00000413553 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
SIK3-202ENST00000413553 ABCA9Q8IUA7 1624 aa11.83□□□□□ -0.52
SIK3-202ENST00000413553 FAM69CQ0P6D2 419 aa11.83□□□□□ -0.52
SIK3-202ENST00000413553 RCAN3Q9UKA8 241 aa11.83□□□□□ -0.52
SIK3-202ENST00000413553 BACH2Q9BYV9 841 aa11.83□□□□□ -0.52
SIK3-202ENST00000413553 ABCC1P33527 1531 aa11.82□□□□□ -0.52
SIK3-202ENST00000413553 ARAP3Q8WWN8 1544 aa11.81□□□□□ -0.52
SIK3-202ENST00000413553 KDM5CP41229 1560 aa11.81□□□□□ -0.52
SIK3-202ENST00000413553 ROCK2O75116 1388 aaKnown RBP11.8□□□□□ -0.52
SIK3-202ENST00000413553 MS4A1P11836 297 aa11.79□□□□□ -0.52
SIK3-202ENST00000413553 ARID4BQ4LE39 1312 aaPredicted RBP11.79□□□□□ -0.52
SIK3-202ENST00000413553 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
SIK3-202ENST00000413553 LRPPRCP42704 1394 aaKnown RBP11.78□□□□□ -0.52
SIK3-202ENST00000413553 BRD4O60885 1362 aaPredicted RBP11.78□□□□□ -0.52
SIK3-202ENST00000413553 CARD11Q9BXL7 1154 aa11.78□□□□□ -0.52
SIK3-202ENST00000413553 SKAP1Q86WV1 359 aa11.77□□□□□ -0.53
SIK3-202ENST00000413553 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
SIK3-202ENST00000413553 PZPP20742 1482 aa11.77□□□□□ -0.53
SIK3-202ENST00000413553 WASHC2CQ9Y4E1 1318 aa11.77□□□□□ -0.53
SIK3-202ENST00000413553 RAPGEF3O95398 923 aa11.77□□□□□ -0.53
SIK3-202ENST00000413553 BRPF3Q9ULD4 1205 aa11.77□□□□□ -0.53
SIK3-202ENST00000413553 KIF3BO15066 747 aa11.76□□□□□ -0.53
SIK3-202ENST00000413553 PLIN1O60240 522 aa11.76□□□□□ -0.53
SIK3-202ENST00000413553 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
SIK3-202ENST00000413553 MAST1Q9Y2H9 1570 aa11.76□□□□□ -0.53
SIK3-202ENST00000413553 DUOX2Q9NRD8 1548 aa11.75□□□□□ -0.53
SIK3-202ENST00000413553 GSE1Q14687 1217 aa11.75□□□□□ -0.53
SIK3-202ENST00000413553 RALBP1Q15311 655 aa11.75□□□□□ -0.53
SIK3-202ENST00000413553 RTEL1-TNFRSF6BF6WH68 1400 aa11.75□□□□□ -0.53
SIK3-202ENST00000413553 ZNF518AQ6AHZ1 1483 aa11.74□□□□□ -0.53
SIK3-202ENST00000413553 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
SIK3-202ENST00000413553 CDCA7LQ96GN5 454 aa11.74□□□□□ -0.53
SIK3-202ENST00000413553 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
SIK3-202ENST00000413553 ST20-MTHFSA0A0A6YYL1 179 aa11.73□□□□□ -0.53
SIK3-202ENST00000413553 PLXNC1O60486 1568 aa11.73□□□□□ -0.53
SIK3-202ENST00000413553 ERBINQ96RT1 1412 aa11.73□□□□□ -0.53
SIK3-202ENST00000413553 PDE3BQ13370 1112 aa11.73□□□□□ -0.53
SIK3-202ENST00000413553 NFKBIBQ15653 356 aa11.73□□□□□ -0.53
SIK3-202ENST00000413553 ATP7AQ04656 1500 aa11.72□□□□□ -0.53
SIK3-202ENST00000413553 RALGAPBQ86X10 1494 aa11.72□□□□□ -0.53
SIK3-202ENST00000413553 CRBNQ96SW2 442 aa11.72□□□□□ -0.53
SIK3-202ENST00000413553 KTN1Q86UP2 1357 aaKnown RBP11.72□□□□□ -0.53
SIK3-202ENST00000413553 ZFYVE16Q7Z3T8 1539 aa11.71□□□□□ -0.53
SIK3-202ENST00000413553 NLRP13Q86W25 1043 aa11.71□□□□□ -0.53
SIK3-202ENST00000413553 CFAP74Q9C0B2 1584 aa11.71□□□□□ -0.53
SIK3-202ENST00000413553 FAM135AQ9P2D6 1515 aa11.71□□□□□ -0.54
SIK3-202ENST00000413553 EIF5BO60841 1220 aaKnown RBP11.71□□□□□ -0.54
SIK3-202ENST00000413553 GGT6Q6P531 493 aa11.71□□□□□ -0.54
SIK3-202ENST00000413553 NEO1Q92859 1461 aa11.7□□□□□ -0.54
SIK3-202ENST00000413553 KANK1Q14678 1352 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms