RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 SAMD9LQ8IVG5 1584 aa20.25■□□□□ 0.83
TTC39A-208ENST00000413473 FAM135AQ9P2D6 1515 aa20.24■□□□□ 0.83
TTC39A-208ENST00000413473 CDC42BPBQ9Y5S2 1711 aa20.23■□□□□ 0.83
TTC39A-208ENST00000413473 RGL3Q3MIN7 710 aa20.23■□□□□ 0.83
TTC39A-208ENST00000413473 RNF123Q5XPI4 1314 aa20.22■□□□□ 0.83
TTC39A-208ENST00000413473 RALBP1Q15311 655 aa20.21■□□□□ 0.83
TTC39A-208ENST00000413473 MYBBP1AQ9BQG0 1328 aaKnown RBP20.21■□□□□ 0.83
TTC39A-208ENST00000413473 CCDC144AA2RUR9 1427 aa20.2■□□□□ 0.82
TTC39A-208ENST00000413473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.2■□□□□ 0.82
TTC39A-208ENST00000413473 PREX2Q70Z35 1606 aa20.19■□□□□ 0.82
TTC39A-208ENST00000413473 BRD4O60885 1362 aaPredicted RBP20.19■□□□□ 0.82
TTC39A-208ENST00000413473 NBPF1Q3BBV0 1214 aa20.18■□□□□ 0.82
TTC39A-208ENST00000413473 LRPPRCP42704 1394 aaKnown RBP20.18■□□□□ 0.82
TTC39A-208ENST00000413473 KTN1Q86UP2 1357 aaKnown RBP20.18■□□□□ 0.82
TTC39A-208ENST00000413473 PRAG1Q86YV5 1406 aa20.18■□□□□ 0.82
TTC39A-208ENST00000413473 SYCP2Q9BX26 1530 aa20.16■□□□□ 0.82
TTC39A-208ENST00000413473 CCDC136Q96JN2 1154 aa20.15■□□□□ 0.82
TTC39A-208ENST00000413473 PLA2R1Q13018 1463 aa20.15■□□□□ 0.82
TTC39A-208ENST00000413473 ARHGAP5Q13017 1502 aa20.14■□□□□ 0.81
TTC39A-208ENST00000413473 ERICH6Q7L0X2 663 aa20.13■□□□□ 0.81
TTC39A-208ENST00000413473 TRPM1Q7Z4N2 1603 aa20.13■□□□□ 0.81
TTC39A-208ENST00000413473 E9PCH4 1651 aa20.12■□□□□ 0.81
TTC39A-208ENST00000413473 TTC37Q6PGP7 1564 aa20.12■□□□□ 0.81
TTC39A-208ENST00000413473 NLRP13Q86W25 1043 aa20.11■□□□□ 0.81
TTC39A-208ENST00000413473 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.11■□□□□ 0.81
TTC39A-208ENST00000413473 PER1O15534 1290 aaPredicted RBP20.11■□□□□ 0.81
TTC39A-208ENST00000413473 A2MP01023 1474 aa20.1■□□□□ 0.81
TTC39A-208ENST00000413473 PLEKHH2Q8IVE3 1493 aa20.1■□□□□ 0.81
TTC39A-208ENST00000413473 SALL2Q9Y467 1007 aaPredicted RBP20.09■□□□□ 0.81
TTC39A-208ENST00000413473 UNC13BO14795 1591 aa20.09■□□□□ 0.81
TTC39A-208ENST00000413473 MAST1Q9Y2H9 1570 aa20.09■□□□□ 0.81
TTC39A-208ENST00000413473 GPRASP1Q5JY77 1395 aa20.09■□□□□ 0.81
TTC39A-208ENST00000413473 PARD3Q8TEW0 1356 aa20.09■□□□□ 0.81
TTC39A-208ENST00000413473 TESK2Q96S53 571 aa20.07■□□□□ 0.8
TTC39A-208ENST00000413473 CHD1O14646 1710 aa20.05■□□□□ 0.8
TTC39A-208ENST00000413473 DISP3Q9P2K9 1392 aa20.04■□□□□ 0.8
TTC39A-208ENST00000413473 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
TTC39A-208ENST00000413473 IQGAP3Q86VI3 1631 aa20.03■□□□□ 0.8
TTC39A-208ENST00000413473 PANK3Q9H999 370 aa20.03■□□□□ 0.8
TTC39A-208ENST00000413473 COL17A1Q9UMD9 1497 aaPredicted RBP20.02■□□□□ 0.8
TTC39A-208ENST00000413473 PLXNC1O60486 1568 aa20.02■□□□□ 0.8
TTC39A-208ENST00000413473 RRP1P56182 461 aaKnown RBP20.02■□□□□ 0.8
TTC39A-208ENST00000413473 MYO5CQ9NQX4 1742 aa20.02■□□□□ 0.79
TTC39A-208ENST00000413473 WASHC2CQ9Y4E1 1318 aa20.01■□□□□ 0.79
TTC39A-208ENST00000413473 RCAN3Q9UKA8 241 aa20.01■□□□□ 0.79
TTC39A-208ENST00000413473 ERCC6L2Q5T890 1561 aa20.01■□□□□ 0.79
TTC39A-208ENST00000413473 PRDM15P57071 1507 aaPredicted RBP20.01■□□□□ 0.79
TTC39A-208ENST00000413473 ABCC2Q92887 1545 aa20.01■□□□□ 0.79
TTC39A-208ENST00000413473 DUOX2Q9NRD8 1548 aa20.01■□□□□ 0.79
TTC39A-208ENST00000413473 SHROOM2Q13796 1616 aa20■□□□□ 0.79
TTC39A-208ENST00000413473 ERBINQ96RT1 1412 aa20■□□□□ 0.79
TTC39A-208ENST00000413473 TMF1P82094 1093 aa20■□□□□ 0.79
TTC39A-208ENST00000413473 PDE3BQ13370 1112 aa19.99■□□□□ 0.79
TTC39A-208ENST00000413473 ATP10AO60312 1499 aa19.99■□□□□ 0.79
TTC39A-208ENST00000413473 EFCAB2Q5VUJ9 269 aa19.98■□□□□ 0.79
TTC39A-208ENST00000413473 LAMC1P11047 1609 aa19.98■□□□□ 0.79
TTC39A-208ENST00000413473 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
TTC39A-208ENST00000413473 CDCA7LQ96GN5 454 aa19.97■□□□□ 0.79
TTC39A-208ENST00000413473 PLCH2O75038 1416 aa19.97■□□□□ 0.79
TTC39A-208ENST00000413473 MAGI2Q86UL8 1455 aa19.96■□□□□ 0.79
TTC39A-208ENST00000413473 EIF2AK4Q9P2K8 1649 aaKnown RBP19.95■□□□□ 0.78
TTC39A-208ENST00000413473 TRAPPC8Q9Y2L5 1435 aa19.93■□□□□ 0.78
TTC39A-208ENST00000413473 NOP58Q9Y2X3 529 aaKnown RBP19.92■□□□□ 0.78
TTC39A-208ENST00000413473 PAK3O75914 559 aaPredicted RBP19.89■□□□□ 0.78
TTC39A-208ENST00000413473 AFAP1Q8N556 730 aa19.89■□□□□ 0.77
TTC39A-208ENST00000413473 SPAG9O60271 1321 aaKnown RBP19.88■□□□□ 0.77
TTC39A-208ENST00000413473 BLMP54132 1417 aaPredicted RBP19.88■□□□□ 0.77
TTC39A-208ENST00000413473 ANP32AP39687 249 aaKnown RBP19.88■□□□□ 0.77
TTC39A-208ENST00000413473 INSRP06213 1382 aa19.88■□□□□ 0.77
TTC39A-208ENST00000413473 ABCC1P33527 1531 aa19.87■□□□□ 0.77
TTC39A-208ENST00000413473 ZCCHC11Q5TAX3 1644 aaKnown RBP19.86■□□□□ 0.77
TTC39A-208ENST00000413473 PLIN1O60240 522 aa19.86■□□□□ 0.77
TTC39A-208ENST00000413473 KNSTRNQ9Y448 316 aa19.86■□□□□ 0.77
TTC39A-208ENST00000413473 IPO9Q96P70 1041 aaKnown RBP19.85■□□□□ 0.77
TTC39A-208ENST00000413473 ADAMTS8Q9UP79 889 aa19.85■□□□□ 0.77
TTC39A-208ENST00000413473 RNF17Q9BXT8 1623 aaKnown RBP19.85■□□□□ 0.77
TTC39A-208ENST00000413473 WDR7Q9Y4E6 1490 aa19.84■□□□□ 0.77
TTC39A-208ENST00000413473 ZMYM4Q5VZL5 1548 aa19.84■□□□□ 0.77
TTC39A-208ENST00000413473 BCL11AQ9H165 835 aa19.83■□□□□ 0.77
TTC39A-208ENST00000413473 TCERG1O14776 1098 aaKnown RBP19.82■□□□□ 0.76
TTC39A-208ENST00000413473 PPP2R1AP30153 589 aa19.82■□□□□ 0.76
TTC39A-208ENST00000413473 UHRF1BP1LA0JNW5 1464 aa19.81■□□□□ 0.76
TTC39A-208ENST00000413473 MADDQ8WXG6 1647 aa19.81■□□□□ 0.76
TTC39A-208ENST00000413473 AMER1Q5JTC6 1135 aaPredicted RBP19.8■□□□□ 0.76
TTC39A-208ENST00000413473 RTEL1-TNFRSF6BF6WH68 1400 aa19.8■□□□□ 0.76
TTC39A-208ENST00000413473 CDCA8Q53HL2 280 aa19.8■□□□□ 0.76
TTC39A-208ENST00000413473 STAC3Q96MF2 364 aa19.79■□□□□ 0.76
TTC39A-208ENST00000413473 ZBTB47Q9UFB7 747 aaPredicted RBP19.79■□□□□ 0.76
TTC39A-208ENST00000413473 TRPM2O94759 1503 aa19.79■□□□□ 0.76
TTC39A-208ENST00000413473 PTPRTO14522 1441 aa19.78■□□□□ 0.76
TTC39A-208ENST00000413473 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
TTC39A-208ENST00000413473 SCAF11Q99590 1463 aaKnown RBP19.78■□□□□ 0.76
TTC39A-208ENST00000413473 WDR43Q15061 677 aaKnown RBP eCLIP19.78■□□□□ 0.76
TTC39A-208ENST00000413473 CRBNQ96SW2 442 aa19.78■□□□□ 0.76
TTC39A-208ENST00000413473 IQGAP1P46940 1657 aa19.78■□□□□ 0.76
TTC39A-208ENST00000413473 NBR1Q14596 966 aa19.77■□□□□ 0.76
TTC39A-208ENST00000413473 PDE4AP27815 886 aa19.76■□□□□ 0.75
TTC39A-208ENST00000413473 ZFYVE16Q7Z3T8 1539 aa19.76■□□□□ 0.75
TTC39A-208ENST00000413473 SCAPERQ9BY12 1400 aa19.75■□□□□ 0.75
TTC39A-208ENST00000413473 CLTCL1P53675 1640 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms