RNA–Protein interactions for RNA: ENST00000412916.6

CBFB-202, Transcript of core-binding factor subunit beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CBFB, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-202ENST00000412916 PAK3O75914 559 aaPredicted RBP23.8■■□□□ 1.4
CBFB-202ENST00000412916 SYCP2Q9BX26 1530 aa23.8■■□□□ 1.4
CBFB-202ENST00000412916 RALGAPBQ86X10 1494 aa23.79■■□□□ 1.4
CBFB-202ENST00000412916 CCDC144AA2RUR9 1427 aa23.79■■□□□ 1.4
CBFB-202ENST00000412916 DISP3Q9P2K9 1392 aa23.79■■□□□ 1.4
CBFB-202ENST00000412916 ADCY10Q96PN6 1610 aa23.79■■□□□ 1.4
CBFB-202ENST00000412916 PLEKHH2Q8IVE3 1493 aa23.79■■□□□ 1.4
CBFB-202ENST00000412916 NBR1Q14596 966 aa23.79■■□□□ 1.4
CBFB-202ENST00000412916 PANK3Q9H999 370 aa23.78■■□□□ 1.4
CBFB-202ENST00000412916 SAMD9LQ8IVG5 1584 aa23.78■■□□□ 1.4
CBFB-202ENST00000412916 SMG6Q86US8 1419 aaKnown RBP23.78■■□□□ 1.4
CBFB-202ENST00000412916 MYT1LQ9UL68 1186 aa23.77■■□□□ 1.4
CBFB-202ENST00000412916 POLR1AO95602 1720 aaPredicted RBP23.76■■□□□ 1.39
CBFB-202ENST00000412916 FAM135AQ9P2D6 1515 aa23.76■■□□□ 1.39
CBFB-202ENST00000412916 MYBBP1AQ9BQG0 1328 aaKnown RBP23.76■■□□□ 1.39
CBFB-202ENST00000412916 ARHGAP5Q13017 1502 aa23.76■■□□□ 1.39
CBFB-202ENST00000412916 NPM2Q86SE8 214 aaKnown RBP23.76■■□□□ 1.39
CBFB-202ENST00000412916 AFAP1Q8N556 730 aa23.75■■□□□ 1.39
CBFB-202ENST00000412916 PLA2R1Q13018 1463 aa23.75■■□□□ 1.39
CBFB-202ENST00000412916 FANCIQ9NVI1 1328 aa23.74■■□□□ 1.39
CBFB-202ENST00000412916 UHRF1BP1Q6BDS2 1440 aa23.73■■□□□ 1.39
CBFB-202ENST00000412916 CDC42BPBQ9Y5S2 1711 aa23.73■■□□□ 1.39
CBFB-202ENST00000412916 CCDC141Q6ZP82 1450 aa23.72■■□□□ 1.39
CBFB-202ENST00000412916 TTC37Q6PGP7 1564 aa23.71■■□□□ 1.39
CBFB-202ENST00000412916 PER1O15534 1290 aaPredicted RBP23.7■■□□□ 1.38
CBFB-202ENST00000412916 TESK2Q96S53 571 aa23.69■■□□□ 1.38
CBFB-202ENST00000412916 PRAG1Q86YV5 1406 aa23.69■■□□□ 1.38
CBFB-202ENST00000412916 ERICH6BQ5W0A0 696 aa23.67■■□□□ 1.38
CBFB-202ENST00000412916 A2MP01023 1474 aa23.67■■□□□ 1.38
CBFB-202ENST00000412916 SHANK2Q9UPX8 1470 aa23.66■■□□□ 1.38
CBFB-202ENST00000412916 KTN1Q86UP2 1357 aaKnown RBP23.66■■□□□ 1.38
CBFB-202ENST00000412916 RCAN3Q9UKA8 241 aa23.66■■□□□ 1.38
CBFB-202ENST00000412916 KDM5DQ9BY66 1539 aa23.66■■□□□ 1.38
CBFB-202ENST00000412916 ARHGEF12Q9NZN5 1544 aa23.66■■□□□ 1.38
CBFB-202ENST00000412916 NLRP13Q86W25 1043 aa23.65■■□□□ 1.38
CBFB-202ENST00000412916 RALBP1Q15311 655 aa23.64■■□□□ 1.38
CBFB-202ENST00000412916 RRP1P56182 461 aaKnown RBP23.64■■□□□ 1.37
CBFB-202ENST00000412916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.62■■□□□ 1.371e-6■■□□□ 13.3
CBFB-202ENST00000412916 LRPPRCP42704 1394 aaKnown RBP23.62■■□□□ 1.37
CBFB-202ENST00000412916 ARID4BQ4LE39 1312 aaPredicted RBP23.61■■□□□ 1.37
CBFB-202ENST00000412916 BRD4O60885 1362 aaPredicted RBP23.61■■□□□ 1.37
CBFB-202ENST00000412916 C20orf194Q5TEA3 1177 aa23.61■■□□□ 1.37
CBFB-202ENST00000412916 RNF123Q5XPI4 1314 aa23.6■■□□□ 1.37
CBFB-202ENST00000412916 ADAMTS8Q9UP79 889 aa23.6■■□□□ 1.37
CBFB-202ENST00000412916 CCDC146Q8IYE0 955 aa23.58■■□□□ 1.37
CBFB-202ENST00000412916 CHD1O14646 1710 aa23.58■■□□□ 1.37
CBFB-202ENST00000412916 TRAPPC8Q9Y2L5 1435 aa23.58■■□□□ 1.37
CBFB-202ENST00000412916 PREX2Q70Z35 1606 aa23.56■■□□□ 1.36
CBFB-202ENST00000412916 PARD3Q8TEW0 1356 aa23.55■■□□□ 1.36
CBFB-202ENST00000412916 TMF1P82094 1093 aa23.54■■□□□ 1.36
CBFB-202ENST00000412916 NOP58Q9Y2X3 529 aaKnown RBP23.54■■□□□ 1.36
CBFB-202ENST00000412916 ERBINQ96RT1 1412 aa23.53■■□□□ 1.36
CBFB-202ENST00000412916 TRPM1Q7Z4N2 1603 aa23.53■■□□□ 1.36
CBFB-202ENST00000412916 ARHGEF5Q12774 1597 aa23.53■■□□□ 1.36
CBFB-202ENST00000412916 CRBNQ96SW2 442 aa23.52■■□□□ 1.36
CBFB-202ENST00000412916 EFCAB2Q5VUJ9 269 aa23.5■■□□□ 1.35
CBFB-202ENST00000412916 CHGAP10645 457 aaKnown RBP23.5■■□□□ 1.35
CBFB-202ENST00000412916 TNNT2P45379 298 aaPredicted RBP23.5■■□□□ 1.35
CBFB-202ENST00000412916 KIF3BO15066 747 aa23.49■■□□□ 1.35
CBFB-202ENST00000412916 RSPH4AQ5TD94 716 aa23.49■■□□□ 1.35
CBFB-202ENST00000412916 SPAG9O60271 1321 aaKnown RBP23.49■■□□□ 1.35
CBFB-202ENST00000412916 NUTM2DQ5VT03 806 aaPredicted RBP23.48■■□□□ 1.35
CBFB-202ENST00000412916 KNSTRNQ9Y448 316 aa23.48■■□□□ 1.35
CBFB-202ENST00000412916 CFAP70Q5T0N1 1121 aa23.47■■□□□ 1.35
CBFB-202ENST00000412916 COL17A1Q9UMD9 1497 aaPredicted RBP23.46■■□□□ 1.35
CBFB-202ENST00000412916 MAGI2Q86UL8 1455 aa23.45■■□□□ 1.34
CBFB-202ENST00000412916 ANP32AP39687 249 aaKnown RBP23.44■■□□□ 1.34
CBFB-202ENST00000412916 LAS1LQ9Y4W2 734 aaKnown RBP23.44■■□□□ 1.34
CBFB-202ENST00000412916 E9PCH4 1651 aa23.44■■□□□ 1.34
CBFB-202ENST00000412916 PPP2R1AP30153 589 aa23.44■■□□□ 1.34
CBFB-202ENST00000412916 MYO5CQ9NQX4 1742 aa23.43■■□□□ 1.34
CBFB-202ENST00000412916 SPINK5Q9NQ38 1064 aaPredicted RBP23.42■■□□□ 1.34
CBFB-202ENST00000412916 PLEKHH1Q9ULM0 1364 aa23.41■■□□□ 1.34
CBFB-202ENST00000412916 WDR43Q15061 677 aaKnown RBP eCLIP23.4■■□□□ 1.34
CBFB-202ENST00000412916 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
CBFB-202ENST00000412916 UGGT1Q9NYU2 1555 aa23.39■■□□□ 1.34
CBFB-202ENST00000412916 DEKP35659 375 aaKnown RBP23.39■■□□□ 1.34
CBFB-202ENST00000412916 NEUROD2Q15784 382 aa23.39■■□□□ 1.34
CBFB-202ENST00000412916 PDE4AP27815 886 aa23.38■■□□□ 1.33
CBFB-202ENST00000412916 IPO9Q96P70 1041 aaKnown RBP23.38■■□□□ 1.33
CBFB-202ENST00000412916 DMRT2Q9Y5R5 561 aa23.38■■□□□ 1.33
CBFB-202ENST00000412916 ADGRF5Q8IZF2 1346 aa23.38■■□□□ 1.33
CBFB-202ENST00000412916 SLC4A3P48751 1232 aa23.38■■□□□ 1.33
CBFB-202ENST00000412916 ZBTB47Q9UFB7 747 aaPredicted RBP23.37■■□□□ 1.33
CBFB-202ENST00000412916 ABCC2Q92887 1545 aa23.37■■□□□ 1.33
CBFB-202ENST00000412916 AMER1Q5JTC6 1135 aaPredicted RBP23.37■■□□□ 1.33
CBFB-202ENST00000412916 PLCH2O75038 1416 aa23.36■■□□□ 1.33
CBFB-202ENST00000412916 PRDM15P57071 1507 aaPredicted RBP23.36■■□□□ 1.33
CBFB-202ENST00000412916 SCAPERQ9BY12 1400 aa23.36■■□□□ 1.33
CBFB-202ENST00000412916 UNC13BO14795 1591 aa23.35■■□□□ 1.33
CBFB-202ENST00000412916 APAF1O14727 1248 aa23.35■■□□□ 1.33
CBFB-202ENST00000412916 CFAP65Q6ZU64 1925 aaKnown RBP23.34■■□□□ 1.33
CBFB-202ENST00000412916 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.33
CBFB-202ENST00000412916 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
CBFB-202ENST00000412916 RRP7AQ9Y3A4 280 aaKnown RBP23.32■■□□□ 1.32
CBFB-202ENST00000412916 DUOX2Q9NRD8 1548 aa23.32■■□□□ 1.32
CBFB-202ENST00000412916 IQGAP3Q86VI3 1631 aa23.31■■□□□ 1.32
CBFB-202ENST00000412916 SAFB2Q14151 953 aaKnown RBP eCLIP23.31■■□□□ 1.32
CBFB-202ENST00000412916 TRAK1Q9UPV9 953 aa23.31■■□□□ 1.32
CBFB-202ENST00000412916 BCAR3O75815 825 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms