RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 TSR3Q9UJK0 312 aaKnown RBP8.93□□□□□ -0.98
RNU4-61P-201ENST00000411243 UPF1Q92900 1129 aaKnown RBP eCLIP8.92□□□□□ -0.98
RNU4-61P-201ENST00000411243 STK25O00506 426 aa8.91□□□□□ -0.98
RNU4-61P-201ENST00000411243 PPP1R18Q6NYC8 613 aa8.91□□□□□ -0.98
RNU4-61P-201ENST00000411243 MYT1Q01538 1121 aa8.9□□□□□ -0.98
RNU4-61P-201ENST00000411243 ANO8Q9HCE9 1232 aaPredicted RBP8.9□□□□□ -0.98
RNU4-61P-201ENST00000411243 TJAP1Q5JTD0 557 aa8.89□□□□□ -0.99
RNU4-61P-201ENST00000411243 HPS5Q9UPZ3 1129 aa8.89□□□□□ -0.99
RNU4-61P-201ENST00000411243 COL9A1P20849 921 aa8.87□□□□□ -0.99
RNU4-61P-201ENST00000411243 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.86□□□□□ -0.99
RNU4-61P-201ENST00000411243 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.86□□□□□ -0.99
RNU4-61P-201ENST00000411243 KIAA1468Q9P260 1216 aa8.86□□□□□ -0.99
RNU4-61P-201ENST00000411243 DGAT1O75907 488 aa8.84□□□□□ -0.99
RNU4-61P-201ENST00000411243 PKDCCQ504Y2 493 aa8.84□□□□□ -0.99
RNU4-61P-201ENST00000411243 TRIM67Q6ZTA4 783 aa8.84□□□□□ -0.99
RNU4-61P-201ENST00000411243 LRCH3Q96II8 777 aa8.84□□□□□ -0.99
RNU4-61P-201ENST00000411243 SEPT9Q9UHD8 586 aaPredicted RBP8.84□□□□□ -0.99
RNU4-61P-201ENST00000411243 WIPF1O43516 503 aa8.82□□□□□ -1
RNU4-61P-201ENST00000411243 ONECUT3O60422 494 aaPredicted RBP8.82□□□□□ -1
RNU4-61P-201ENST00000411243 FAM98CQ17RN3 349 aaKnown RBP8.82□□□□□ -1
RNU4-61P-201ENST00000411243 INSM1Q01101 510 aaPredicted RBP8.81□□□□□ -1
RNU4-61P-201ENST00000411243 IL21Q9HBE4 155 aa8.81□□□□□ -1
RNU4-61P-201ENST00000411243 WFS1O76024 890 aa8.8□□□□□ -1
RNU4-61P-201ENST00000411243 MTRQ99707 1265 aa8.8□□□□□ -1
RNU4-61P-201ENST00000411243 EVI5O60447 810 aa8.79□□□□□ -1
RNU4-61P-201ENST00000411243 PCDHGA10Q9Y5H3 936 aa8.75□□□□□ -1.01
RNU4-61P-201ENST00000411243 PPP4CP60510 307 aa8.74□□□□□ -1.01
RNU4-61P-201ENST00000411243 PRR20EP86478 221 aa8.73□□□□□ -1.01
RNU4-61P-201ENST00000411243 PRR20CP86479 221 aa8.73□□□□□ -1.01
RNU4-61P-201ENST00000411243 PRR20DP86480 221 aa8.73□□□□□ -1.01
RNU4-61P-201ENST00000411243 PRR20BP86481 221 aa8.73□□□□□ -1.01
RNU4-61P-201ENST00000411243 PRR20AP86496 221 aa8.73□□□□□ -1.01
RNU4-61P-201ENST00000411243 TRIM6-TRIM34B2RNG4 842 aa8.72□□□□□ -1.01
RNU4-61P-201ENST00000411243 NFX1Q12986 1120 aaKnown RBP8.72□□□□□ -1.01
RNU4-61P-201ENST00000411243 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
RNU4-61P-201ENST00000411243 GGCXP38435 758 aa8.71□□□□□ -1.02
RNU4-61P-201ENST00000411243 SUZ12Q15022 739 aaKnown RBP8.71□□□□□ -1.02
RNU4-61P-201ENST00000411243 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
RNU4-61P-201ENST00000411243 FBXW7Q969H0 707 aa8.71□□□□□ -1.02
RNU4-61P-201ENST00000411243 ST8SIA5O15466 376 aa8.69□□□□□ -1.02
RNU4-61P-201ENST00000411243 AAASQ9NRG9 546 aa8.69□□□□□ -1.02
RNU4-61P-201ENST00000411243 FAM187AA6NFU0 413 aa8.68□□□□□ -1.02
RNU4-61P-201ENST00000411243 TYW1BQ6NUM6 668 aa8.68□□□□□ -1.02
RNU4-61P-201ENST00000411243 NKX2-3Q8TAU0 364 aa8.68□□□□□ -1.02
RNU4-61P-201ENST00000411243 TMUB1Q9BVT8 246 aa8.68□□□□□ -1.02
RNU4-61P-201ENST00000411243 CRISPLD2Q9H0B8 497 aa8.68□□□□□ -1.02
RNU4-61P-201ENST00000411243 EMID1Q96A84 441 aaPredicted RBP8.65□□□□□ -1.02
RNU4-61P-201ENST00000411243 SLC19A1P41440 591 aa8.64□□□□□ -1.03
RNU4-61P-201ENST00000411243 PHF14O94880 888 aa8.63□□□□□ -1.03
RNU4-61P-201ENST00000411243 LCE2CQ5TA81 110 aa8.63□□□□□ -1.03
RNU4-61P-201ENST00000411243 SPRYD7Q5W111 196 aa8.62□□□□□ -1.03
RNU4-61P-201ENST00000411243 ZNF598Q86UK7 904 aaKnown RBP8.62□□□□□ -1.03
RNU4-61P-201ENST00000411243 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
RNU4-61P-201ENST00000411243 SAMD7Q7Z3H4 446 aa8.6□□□□□ -1.03
RNU4-61P-201ENST00000411243 CRIPAKQ8N1N5 446 aa8.59□□□□□ -1.03
RNU4-61P-201ENST00000411243 FAM181BA6NEQ2 426 aa8.58□□□□□ -1.04
RNU4-61P-201ENST00000411243 GDF9O60383 454 aa8.58□□□□□ -1.04
RNU4-61P-201ENST00000411243 MAP3K9P80192 1104 aa8.57□□□□□ -1.04
RNU4-61P-201ENST00000411243 TNFRSF10AO00220 468 aa8.56□□□□□ -1.04
RNU4-61P-201ENST00000411243 APLP1P51693 650 aa8.56□□□□□ -1.04
RNU4-61P-201ENST00000411243 GMPR2Q9P2T1 348 aaKnown RBP8.56□□□□□ -1.04
RNU4-61P-201ENST00000411243 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
RNU4-61P-201ENST00000411243 RNF223E7ERA6 249 aa8.55□□□□□ -1.04
RNU4-61P-201ENST00000411243 ZNF697Q5TEC3 545 aa8.55□□□□□ -1.04
RNU4-61P-201ENST00000411243 DACH1Q9UI36 760 aa8.55□□□□□ -1.04
RNU4-61P-201ENST00000411243 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
RNU4-61P-201ENST00000411243 TSKSQ9UJT2 592 aa8.54□□□□□ -1.04
RNU4-61P-201ENST00000411243 NCKAP5LQ9HCH0 1330 aa8.53□□□□□ -1.04
RNU4-61P-201ENST00000411243 EPAS1Q99814 870 aa8.52□□□□□ -1.05
RNU4-61P-201ENST00000411243 COPS2P61201 443 aa8.5□□□□□ -1.05
RNU4-61P-201ENST00000411243 RGL2O15211 777 aa8.49□□□□□ -1.05
RNU4-61P-201ENST00000411243 ECM2O94769 699 aaPredicted RBP8.49□□□□□ -1.05
RNU4-61P-201ENST00000411243 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
RNU4-61P-201ENST00000411243 TERTO14746 1132 aaKnown RBP8.48□□□□□ -1.05
RNU4-61P-201ENST00000411243 ZPR1O75312 459 aa8.48□□□□□ -1.05
RNU4-61P-201ENST00000411243 ANKLE1Q8NAG6 615 aa8.48□□□□□ -1.05
RNU4-61P-201ENST00000411243 EMILIN3Q9NT22 766 aa8.48□□□□□ -1.05
RNU4-61P-201ENST00000411243 AVPP01185 164 aa8.47□□□□□ -1.05
RNU4-61P-201ENST00000411243 PDE4AP27815 886 aa8.47□□□□□ -1.05
RNU4-61P-201ENST00000411243 SMAPO00193 183 aa8.46□□□□□ -1.06
RNU4-61P-201ENST00000411243 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.06
RNU4-61P-201ENST00000411243 AXIN1O15169 862 aa8.44□□□□□ -1.06
RNU4-61P-201ENST00000411243 RNF40O75150 1001 aa8.43□□□□□ -1.06
RNU4-61P-201ENST00000411243 CTC1Q2NKJ3 1217 aa8.43□□□□□ -1.06
RNU4-61P-201ENST00000411243 LMOD2Q6P5Q4 547 aa8.43□□□□□ -1.06
RNU4-61P-201ENST00000411243 RBM33Q96EV2 1170 aaKnown RBP8.43□□□□□ -1.06
RNU4-61P-201ENST00000411243 ZSCAN1Q8NBB4 408 aa8.42□□□□□ -1.06
RNU4-61P-201ENST00000411243 NECTIN2Q92692 538 aa8.42□□□□□ -1.06
RNU4-61P-201ENST00000411243 DDX27Q96GQ7 796 aaKnown RBP8.42□□□□□ -1.06
RNU4-61P-201ENST00000411243 SMCPP49901 116 aaPredicted RBP8.41□□□□□ -1.06
RNU4-61P-201ENST00000411243 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
RNU4-61P-201ENST00000411243 PKD2L1Q9P0L9 805 aa8.4□□□□□ -1.06
RNU4-61P-201ENST00000411243 MFSD10Q14728 455 aa8.39□□□□□ -1.07
RNU4-61P-201ENST00000411243 FAM198AQ9UFP1 575 aa8.39□□□□□ -1.07
RNU4-61P-201ENST00000411243 NBPF26B4DH59 902 aa8.38□□□□□ -1.07
RNU4-61P-201ENST00000411243 PPEF1O14829 653 aaPredicted RBP8.38□□□□□ -1.07
RNU4-61P-201ENST00000411243 SNRPBP14678 240 aaKnown RBP8.38□□□□□ -1.07
RNU4-61P-201ENST00000411243 CDCA7LQ96GN5 454 aa8.38□□□□□ -1.07
RNU4-61P-201ENST00000411243 TATDN2Q93075 761 aa8.37□□□□□ -1.07
RNU4-61P-201ENST00000411243 LARP6Q9BRS8 491 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms