RNA–Protein interactions for RNA: ENST00000410660.1

RNU6-887P-201, Transcript of RNA, U6 small nuclear 887, pseudogene, humanhuman

BASIC

Gene RNU6-887P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-887P-201ENST00000410660 UPF1Q92900 1129 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6-887P-201ENST00000410660 ZDHHC16Q969W1 377 aa4.23□□□□□ -1.73
RNU6-887P-201ENST00000410660 TJAP1Q5JTD0 557 aa4.22□□□□□ -1.73
RNU6-887P-201ENST00000410660 TSR3Q9UJK0 312 aaKnown RBP4.22□□□□□ -1.73
RNU6-887P-201ENST00000410660 COL9A1P20849 921 aa4.21□□□□□ -1.74
RNU6-887P-201ENST00000410660 TRIM67Q6ZTA4 783 aa4.21□□□□□ -1.74
RNU6-887P-201ENST00000410660 HPS5Q9UPZ3 1129 aa4.21□□□□□ -1.74
RNU6-887P-201ENST00000410660 STK25O00506 426 aa4.2□□□□□ -1.74
RNU6-887P-201ENST00000410660 ANO8Q9HCE9 1232 aaPredicted RBP4.2□□□□□ -1.74
RNU6-887P-201ENST00000410660 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.2□□□□□ -1.74
RNU6-887P-201ENST00000410660 SEPT9Q9UHD8 586 aaPredicted RBP4.2□□□□□ -1.74
RNU6-887P-201ENST00000410660 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.19□□□□□ -1.74
RNU6-887P-201ENST00000410660 KIAA1468Q9P260 1216 aa4.19□□□□□ -1.74
RNU6-887P-201ENST00000410660 TAOK2Q9UL54 1235 aa4.19□□□□□ -1.74
RNU6-887P-201ENST00000410660 PKDCCQ504Y2 493 aa4.18□□□□□ -1.74
RNU6-887P-201ENST00000410660 WIPF1O43516 503 aa4.17□□□□□ -1.74
RNU6-887P-201ENST00000410660 DGAT1O75907 488 aa4.17□□□□□ -1.74
RNU6-887P-201ENST00000410660 WFS1O76024 890 aa4.17□□□□□ -1.74
RNU6-887P-201ENST00000410660 LRCH3Q96II8 777 aa4.17□□□□□ -1.74
RNU6-887P-201ENST00000410660 MTRQ99707 1265 aa4.17□□□□□ -1.74
RNU6-887P-201ENST00000410660 EVI5O60447 810 aa4.16□□□□□ -1.74
RNU6-887P-201ENST00000410660 INSM1Q01101 510 aaPredicted RBP4.16□□□□□ -1.74
RNU6-887P-201ENST00000410660 FAM98CQ17RN3 349 aaKnown RBP4.16□□□□□ -1.74
RNU6-887P-201ENST00000410660 IL21Q9HBE4 155 aa4.16□□□□□ -1.74
RNU6-887P-201ENST00000410660 ONECUT3O60422 494 aaPredicted RBP4.15□□□□□ -1.75
RNU6-887P-201ENST00000410660 NFX1Q12986 1120 aaKnown RBP4.15□□□□□ -1.75
RNU6-887P-201ENST00000410660 SUZ12Q15022 739 aaKnown RBP4.15□□□□□ -1.75
RNU6-887P-201ENST00000410660 ZNF516Q92618 1163 aa4.15□□□□□ -1.75
RNU6-887P-201ENST00000410660 PCDHGA10Q9Y5H3 936 aa4.14□□□□□ -1.75
RNU6-887P-201ENST00000410660 ST8SIA5O15466 376 aa4.13□□□□□ -1.75
RNU6-887P-201ENST00000410660 PPP4CP60510 307 aa4.13□□□□□ -1.75
RNU6-887P-201ENST00000410660 PRR20EP86478 221 aa4.13□□□□□ -1.75
RNU6-887P-201ENST00000410660 PRR20CP86479 221 aa4.13□□□□□ -1.75
RNU6-887P-201ENST00000410660 PRR20DP86480 221 aa4.13□□□□□ -1.75
RNU6-887P-201ENST00000410660 PRR20BP86481 221 aa4.13□□□□□ -1.75
RNU6-887P-201ENST00000410660 PRR20AP86496 221 aa4.13□□□□□ -1.75
RNU6-887P-201ENST00000410660 LCE2CQ5TA81 110 aa4.13□□□□□ -1.75
RNU6-887P-201ENST00000410660 NKX2-3Q8TAU0 364 aa4.13□□□□□ -1.75
RNU6-887P-201ENST00000410660 TRIM6-TRIM34B2RNG4 842 aa4.12□□□□□ -1.75
RNU6-887P-201ENST00000410660 EMID1Q96A84 441 aaPredicted RBP4.12□□□□□ -1.75
RNU6-887P-201ENST00000410660 AAASQ9NRG9 546 aa4.12□□□□□ -1.75
RNU6-887P-201ENST00000410660 FAM187AA6NFU0 413 aa4.11□□□□□ -1.75
RNU6-887P-201ENST00000410660 PPP1R15BQ5SWA1 713 aa4.11□□□□□ -1.75
RNU6-887P-201ENST00000410660 CRISPLD2Q9H0B8 497 aa4.1□□□□□ -1.75
RNU6-887P-201ENST00000410660 GGCXP38435 758 aa4.09□□□□□ -1.75
RNU6-887P-201ENST00000410660 SLC19A1P41440 591 aa4.09□□□□□ -1.75
RNU6-887P-201ENST00000410660 TYW1BQ6NUM6 668 aa4.09□□□□□ -1.75
RNU6-887P-201ENST00000410660 FBXW7Q969H0 707 aa4.09□□□□□ -1.75
RNU6-887P-201ENST00000410660 TMUB1Q9BVT8 246 aa4.09□□□□□ -1.75
RNU6-887P-201ENST00000410660 SPRYD7Q5W111 196 aa4.08□□□□□ -1.76
RNU6-887P-201ENST00000410660 ZNF598Q86UK7 904 aaKnown RBP4.08□□□□□ -1.76
RNU6-887P-201ENST00000410660 DACH1Q9UI36 760 aa4.08□□□□□ -1.76
RNU6-887P-201ENST00000410660 TNFRSF10AO00220 468 aa4.07□□□□□ -1.76
RNU6-887P-201ENST00000410660 GDF9O60383 454 aa4.07□□□□□ -1.76
RNU6-887P-201ENST00000410660 PHF14O94880 888 aa4.07□□□□□ -1.76
RNU6-887P-201ENST00000410660 C6orf132Q5T0Z8 1188 aa4.07□□□□□ -1.76
RNU6-887P-201ENST00000410660 SAMD7Q7Z3H4 446 aa4.07□□□□□ -1.76
RNU6-887P-201ENST00000410660 APLP1P51693 650 aa4.06□□□□□ -1.76
RNU6-887P-201ENST00000410660 CRIPAKQ8N1N5 446 aa4.06□□□□□ -1.76
RNU6-887P-201ENST00000410660 GMPR2Q9P2T1 348 aaKnown RBP4.06□□□□□ -1.76
RNU6-887P-201ENST00000410660 C11orf95C9JLR9 678 aaPredicted RBP4.05□□□□□ -1.76
RNU6-887P-201ENST00000410660 RNF223E7ERA6 249 aa4.05□□□□□ -1.76
RNU6-887P-201ENST00000410660 MAP3K9P80192 1104 aa4.05□□□□□ -1.76
RNU6-887P-201ENST00000410660 ZNF697Q5TEC3 545 aa4.05□□□□□ -1.76
RNU6-887P-201ENST00000410660 TSKSQ9UJT2 592 aa4.05□□□□□ -1.76
RNU6-887P-201ENST00000410660 NCKAP5LQ9HCH0 1330 aa4.04□□□□□ -1.76
RNU6-887P-201ENST00000410660 FAM181BA6NEQ2 426 aa4.04□□□□□ -1.76
RNU6-887P-201ENST00000410660 COPS2P61201 443 aa4.04□□□□□ -1.76
RNU6-887P-201ENST00000410660 LORP23490 312 aaPredicted RBP4.03□□□□□ -1.76
RNU6-887P-201ENST00000410660 LIAT1Q6ZQX7 453 aa4.03□□□□□ -1.76
RNU6-887P-201ENST00000410660 SMAPO00193 183 aa4.02□□□□□ -1.77
RNU6-887P-201ENST00000410660 TERTO14746 1132 aaKnown RBP4.02□□□□□ -1.77
RNU6-887P-201ENST00000410660 RGL2O15211 777 aa4.02□□□□□ -1.77
RNU6-887P-201ENST00000410660 ZPR1O75312 459 aa4.02□□□□□ -1.77
RNU6-887P-201ENST00000410660 PACS2Q86VP3 889 aa4.02□□□□□ -1.77
RNU6-887P-201ENST00000410660 EMILIN3Q9NT22 766 aa4.02□□□□□ -1.77
RNU6-887P-201ENST00000410660 AVPP01185 164 aa4.01□□□□□ -1.77
RNU6-887P-201ENST00000410660 EPAS1Q99814 870 aa4.01□□□□□ -1.77
RNU6-887P-201ENST00000410660 C3orf80F5H4A9 247 aa4□□□□□ -1.77
RNU6-887P-201ENST00000410660 RNF40O75150 1001 aa4□□□□□ -1.77
RNU6-887P-201ENST00000410660 ECM2O94769 699 aaPredicted RBP4□□□□□ -1.77
RNU6-887P-201ENST00000410660 ANKLE1Q8NAG6 615 aa4□□□□□ -1.77
RNU6-887P-201ENST00000410660 RBM33Q96EV2 1170 aaKnown RBP4□□□□□ -1.77
RNU6-887P-201ENST00000410660 PPEF1O14829 653 aaPredicted RBP3.99□□□□□ -1.77
RNU6-887P-201ENST00000410660 AXIN1O15169 862 aa3.99□□□□□ -1.77
RNU6-887P-201ENST00000410660 PDE4AP27815 886 aa3.99□□□□□ -1.77
RNU6-887P-201ENST00000410660 ZSCAN1Q8NBB4 408 aa3.99□□□□□ -1.77
RNU6-887P-201ENST00000410660 SNRPBP14678 240 aaKnown RBP3.98□□□□□ -1.77
RNU6-887P-201ENST00000410660 PKD2L1Q9P0L9 805 aa3.98□□□□□ -1.77
RNU6-887P-201ENST00000410660 FAM198AQ9UFP1 575 aa3.98□□□□□ -1.77
RNU6-887P-201ENST00000410660 TLL1O43897 1013 aa3.97□□□□□ -1.77
RNU6-887P-201ENST00000410660 SMCPP49901 116 aaPredicted RBP3.97□□□□□ -1.77
RNU6-887P-201ENST00000410660 CTC1Q2NKJ3 1217 aa3.97□□□□□ -1.77
RNU6-887P-201ENST00000410660 TSR1Q2NL82 804 aaKnown RBP3.97□□□□□ -1.77
RNU6-887P-201ENST00000410660 DDX27Q96GQ7 796 aaKnown RBP3.97□□□□□ -1.77
RNU6-887P-201ENST00000410660 S1PR4O95977 384 aa3.96□□□□□ -1.78
RNU6-887P-201ENST00000410660 MFSD10Q14728 455 aa3.96□□□□□ -1.78
RNU6-887P-201ENST00000410660 PLA2G2CQ5R387 149 aa3.96□□□□□ -1.78
RNU6-887P-201ENST00000410660 TATDN2Q93075 761 aa3.96□□□□□ -1.78
RNU6-887P-201ENST00000410660 CDCA7LQ96GN5 454 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms