RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 HPS5Q9UPZ3 1129 aa5.28□□□□□ -1.56
RNU6-554P-201ENST00000410466 DSG2Q14126 1118 aa5.27□□□□□ -1.57
RNU6-554P-201ENST00000410466 PROX2Q3B8N5 592 aa5.27□□□□□ -1.57
RNU6-554P-201ENST00000410466 OXER1Q8TDS5 423 aa5.27□□□□□ -1.57
RNU6-554P-201ENST00000410466 GPHNQ9NQX3 736 aaPredicted RBP5.27□□□□□ -1.57
RNU6-554P-201ENST00000410466 STK25O00506 426 aa5.26□□□□□ -1.57
RNU6-554P-201ENST00000410466 MYT1Q01538 1121 aa5.26□□□□□ -1.57
RNU6-554P-201ENST00000410466 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.26□□□□□ -1.57
RNU6-554P-201ENST00000410466 WFS1O76024 890 aa5.25□□□□□ -1.57
RNU6-554P-201ENST00000410466 LRCH3Q96II8 777 aa5.25□□□□□ -1.57
RNU6-554P-201ENST00000410466 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.25□□□□□ -1.57
RNU6-554P-201ENST00000410466 DGAT1O75907 488 aa5.24□□□□□ -1.57
RNU6-554P-201ENST00000410466 PPP1R37O75864 691 aa5.23□□□□□ -1.57
RNU6-554P-201ENST00000410466 TJAP1Q5JTD0 557 aa5.23□□□□□ -1.57
RNU6-554P-201ENST00000410466 SEPT9Q9UHD8 586 aaPredicted RBP5.23□□□□□ -1.57
RNU6-554P-201ENST00000410466 WIPF1O43516 503 aa5.22□□□□□ -1.57
RNU6-554P-201ENST00000410466 FAM98CQ17RN3 349 aaKnown RBP5.22□□□□□ -1.57
RNU6-554P-201ENST00000410466 IL21Q9HBE4 155 aa5.22□□□□□ -1.57
RNU6-554P-201ENST00000410466 KIAA1468Q9P260 1216 aa5.22□□□□□ -1.57
RNU6-554P-201ENST00000410466 GGCXP38435 758 aa5.21□□□□□ -1.58
RNU6-554P-201ENST00000410466 COL9A1P20849 921 aa5.2□□□□□ -1.58
RNU6-554P-201ENST00000410466 MTRQ99707 1265 aa5.2□□□□□ -1.58
RNU6-554P-201ENST00000410466 PPP4CP60510 307 aa5.19□□□□□ -1.58
RNU6-554P-201ENST00000410466 SUZ12Q15022 739 aaKnown RBP5.19□□□□□ -1.58
RNU6-554P-201ENST00000410466 TRIM67Q6ZTA4 783 aa5.19□□□□□ -1.58
RNU6-554P-201ENST00000410466 ANO8Q9HCE9 1232 aaPredicted RBP5.19□□□□□ -1.58
RNU6-554P-201ENST00000410466 FAM187AA6NFU0 413 aa5.18□□□□□ -1.58
RNU6-554P-201ENST00000410466 ONECUT3O60422 494 aaPredicted RBP5.18□□□□□ -1.58
RNU6-554P-201ENST00000410466 FAM181BA6NEQ2 426 aa5.17□□□□□ -1.58
RNU6-554P-201ENST00000410466 EVI5O60447 810 aa5.17□□□□□ -1.58
RNU6-554P-201ENST00000410466 ST8SIA5O15466 376 aa5.15□□□□□ -1.59
RNU6-554P-201ENST00000410466 PRR20EP86478 221 aa5.15□□□□□ -1.59
RNU6-554P-201ENST00000410466 PRR20CP86479 221 aa5.15□□□□□ -1.59
RNU6-554P-201ENST00000410466 PRR20DP86480 221 aa5.15□□□□□ -1.59
RNU6-554P-201ENST00000410466 PRR20BP86481 221 aa5.15□□□□□ -1.59
RNU6-554P-201ENST00000410466 PRR20AP86496 221 aa5.15□□□□□ -1.59
RNU6-554P-201ENST00000410466 NFX1Q12986 1120 aaKnown RBP5.15□□□□□ -1.59
RNU6-554P-201ENST00000410466 ZNF516Q92618 1163 aa5.15□□□□□ -1.59
RNU6-554P-201ENST00000410466 FBXW7Q969H0 707 aa5.14□□□□□ -1.59
RNU6-554P-201ENST00000410466 AAASQ9NRG9 546 aa5.14□□□□□ -1.59
RNU6-554P-201ENST00000410466 TRIM6-TRIM34B2RNG4 842 aa5.13□□□□□ -1.59
RNU6-554P-201ENST00000410466 TMUB1Q9BVT8 246 aa5.13□□□□□ -1.59
RNU6-554P-201ENST00000410466 PCDHGA10Q9Y5H3 936 aa5.13□□□□□ -1.59
RNU6-554P-201ENST00000410466 SLC19A1P41440 591 aa5.12□□□□□ -1.59
RNU6-554P-201ENST00000410466 PPP1R15BQ5SWA1 713 aa5.12□□□□□ -1.59
RNU6-554P-201ENST00000410466 TYW1BQ6NUM6 668 aa5.12□□□□□ -1.59
RNU6-554P-201ENST00000410466 C11orf95C9JLR9 678 aaPredicted RBP5.11□□□□□ -1.59
RNU6-554P-201ENST00000410466 NKX2-3Q8TAU0 364 aa5.11□□□□□ -1.59
RNU6-554P-201ENST00000410466 SPRYD7Q5W111 196 aa5.1□□□□□ -1.59
RNU6-554P-201ENST00000410466 ZNF598Q86UK7 904 aaKnown RBP5.1□□□□□ -1.59
RNU6-554P-201ENST00000410466 TNFRSF10AO00220 468 aa5.09□□□□□ -1.59
RNU6-554P-201ENST00000410466 MAP3K9P80192 1104 aa5.08□□□□□ -1.6
RNU6-554P-201ENST00000410466 ZNF697Q5TEC3 545 aa5.08□□□□□ -1.6
RNU6-554P-201ENST00000410466 SAMD7Q7Z3H4 446 aa5.08□□□□□ -1.6
RNU6-554P-201ENST00000410466 PHF14O94880 888 aa5.07□□□□□ -1.6
RNU6-554P-201ENST00000410466 PACS2Q86VP3 889 aa5.07□□□□□ -1.6
RNU6-554P-201ENST00000410466 GMPR2Q9P2T1 348 aaKnown RBP5.07□□□□□ -1.6
RNU6-554P-201ENST00000410466 C6orf132Q5T0Z8 1188 aa5.06□□□□□ -1.6
RNU6-554P-201ENST00000410466 CRIPAKQ8N1N5 446 aa5.06□□□□□ -1.6
RNU6-554P-201ENST00000410466 CRISPLD2Q9H0B8 497 aa5.06□□□□□ -1.6
RNU6-554P-201ENST00000410466 RNF223E7ERA6 249 aa5.05□□□□□ -1.6
RNU6-554P-201ENST00000410466 GDF9O60383 454 aa5.05□□□□□ -1.6
RNU6-554P-201ENST00000410466 RNF40O75150 1001 aa5.05□□□□□ -1.6
RNU6-554P-201ENST00000410466 COPS2P61201 443 aa5.05□□□□□ -1.6
RNU6-554P-201ENST00000410466 TERTO14746 1132 aaKnown RBP5.04□□□□□ -1.6
RNU6-554P-201ENST00000410466 APLP1P51693 650 aa5.04□□□□□ -1.6
RNU6-554P-201ENST00000410466 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
RNU6-554P-201ENST00000410466 EMID1Q96A84 441 aaPredicted RBP5.04□□□□□ -1.6
RNU6-554P-201ENST00000410466 DACH1Q9UI36 760 aa5.04□□□□□ -1.6
RNU6-554P-201ENST00000410466 ZSCAN1Q8NBB4 408 aa5.03□□□□□ -1.6
RNU6-554P-201ENST00000410466 AXIN1O15169 862 aa5.02□□□□□ -1.61
RNU6-554P-201ENST00000410466 NECTIN2Q92692 538 aa5.02□□□□□ -1.61
RNU6-554P-201ENST00000410466 EPAS1Q99814 870 aa5.02□□□□□ -1.61
RNU6-554P-201ENST00000410466 ZPR1O75312 459 aa5.01□□□□□ -1.61
RNU6-554P-201ENST00000410466 CTC1Q2NKJ3 1217 aa5.01□□□□□ -1.61
RNU6-554P-201ENST00000410466 ANKLE1Q8NAG6 615 aa5.01□□□□□ -1.61
RNU6-554P-201ENST00000410466 TSKSQ9UJT2 592 aa5.01□□□□□ -1.61
RNU6-554P-201ENST00000410466 SMAPO00193 183 aa4.99□□□□□ -1.61
RNU6-554P-201ENST00000410466 ECM2O94769 699 aaPredicted RBP4.99□□□□□ -1.61
RNU6-554P-201ENST00000410466 AVPP01185 164 aa4.99□□□□□ -1.61
RNU6-554P-201ENST00000410466 PDE4AP27815 886 aa4.99□□□□□ -1.61
RNU6-554P-201ENST00000410466 HDGFP51858 240 aaKnown RBP4.99□□□□□ -1.61
RNU6-554P-201ENST00000410466 LMOD2Q6P5Q4 547 aa4.99□□□□□ -1.61
RNU6-554P-201ENST00000410466 LIAT1Q6ZQX7 453 aa4.99□□□□□ -1.61
RNU6-554P-201ENST00000410466 RBM33Q96EV2 1170 aaKnown RBP4.99□□□□□ -1.61
RNU6-554P-201ENST00000410466 FOXC1Q12948 553 aa4.97□□□□□ -1.61
RNU6-554P-201ENST00000410466 SLC16A10Q8TF71 515 aa4.97□□□□□ -1.61
RNU6-554P-201ENST00000410466 NBPF26B4DH59 902 aa4.96□□□□□ -1.62
RNU6-554P-201ENST00000410466 SNRPBP14678 240 aaKnown RBP4.96□□□□□ -1.62
RNU6-554P-201ENST00000410466 KCTD17Q8N5Z5 321 aa4.96□□□□□ -1.62
RNU6-554P-201ENST00000410466 DDX27Q96GQ7 796 aaKnown RBP4.96□□□□□ -1.62
RNU6-554P-201ENST00000410466 NCKAP5LQ9HCH0 1330 aa4.96□□□□□ -1.62
RNU6-554P-201ENST00000410466 LORP23490 312 aaPredicted RBP4.95□□□□□ -1.62
RNU6-554P-201ENST00000410466 SMCPP49901 116 aaPredicted RBP4.95□□□□□ -1.62
RNU6-554P-201ENST00000410466 SENP2Q9HC62 589 aa4.95□□□□□ -1.62
RNU6-554P-201ENST00000410466 EMILIN3Q9NT22 766 aa4.95□□□□□ -1.62
RNU6-554P-201ENST00000410466 PPEF1O14829 653 aaPredicted RBP4.94□□□□□ -1.62
RNU6-554P-201ENST00000410466 RGL2O15211 777 aa4.94□□□□□ -1.62
RNU6-554P-201ENST00000410466 TLL1O43897 1013 aa4.94□□□□□ -1.62
RNU6-554P-201ENST00000410466 S1PR4O95977 384 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms