RNA–Protein interactions for RNA: ENST00000410144.1

RNU2-3P-201, Transcript of RNA, U2 small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU2-3P, Length 191 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-3P-201ENST00000410144 KIAA1468Q9P260 1216 aa8.54□□□□□ -1.04
RNU2-3P-201ENST00000410144 HPS5Q9UPZ3 1129 aa8.54□□□□□ -1.04
RNU2-3P-201ENST00000410144 PPP1R15BQ5SWA1 713 aa8.53□□□□□ -1.04
RNU2-3P-201ENST00000410144 LRCH3Q96II8 777 aa8.53□□□□□ -1.04
RNU2-3P-201ENST00000410144 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.53□□□□□ -1.04
RNU2-3P-201ENST00000410144 ONECUT3O60422 494 aaPredicted RBP8.52□□□□□ -1.05
RNU2-3P-201ENST00000410144 COL9A1P20849 921 aa8.52□□□□□ -1.05
RNU2-3P-201ENST00000410144 FAM98CQ17RN3 349 aaKnown RBP8.5□□□□□ -1.05
RNU2-3P-201ENST00000410144 SEPT9Q9UHD8 586 aaPredicted RBP8.5□□□□□ -1.05
RNU2-3P-201ENST00000410144 FBXW7Q969H0 707 aa8.49□□□□□ -1.05
RNU2-3P-201ENST00000410144 CRISPLD2Q9H0B8 497 aa8.49□□□□□ -1.05
RNU2-3P-201ENST00000410144 PPP1R18Q6NYC8 613 aa8.48□□□□□ -1.05
RNU2-3P-201ENST00000410144 PCDHGA10Q9Y5H3 936 aa8.48□□□□□ -1.05
RNU2-3P-201ENST00000410144 RGL2O15211 777 aa8.47□□□□□ -1.05
RNU2-3P-201ENST00000410144 TJAP1Q5JTD0 557 aa8.47□□□□□ -1.05
RNU2-3P-201ENST00000410144 TYW1BQ6NUM6 668 aa8.46□□□□□ -1.06
RNU2-3P-201ENST00000410144 PPP4CP60510 307 aa8.44□□□□□ -1.06
RNU2-3P-201ENST00000410144 MAP3K9P80192 1104 aa8.44□□□□□ -1.06
RNU2-3P-201ENST00000410144 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.44□□□□□ -1.06
RNU2-3P-201ENST00000410144 IL21Q9HBE4 155 aa8.43□□□□□ -1.06
RNU2-3P-201ENST00000410144 TRIM6-TRIM34B2RNG4 842 aa8.42□□□□□ -1.06
RNU2-3P-201ENST00000410144 TREML4Q6UXN2 200 aa8.41□□□□□ -1.06
RNU2-3P-201ENST00000410144 MTRQ99707 1265 aa8.41□□□□□ -1.06
RNU2-3P-201ENST00000410144 PHF14O94880 888 aa8.4□□□□□ -1.06
RNU2-3P-201ENST00000410144 PDE4AP27815 886 aa8.4□□□□□ -1.06
RNU2-3P-201ENST00000410144 PKDCCQ504Y2 493 aa8.39□□□□□ -1.07
RNU2-3P-201ENST00000410144 GGCXP38435 758 aa8.38□□□□□ -1.07
RNU2-3P-201ENST00000410144 DGAT1O75907 488 aa8.37□□□□□ -1.07
RNU2-3P-201ENST00000410144 C6orf132Q5T0Z8 1188 aa8.37□□□□□ -1.07
RNU2-3P-201ENST00000410144 NCKAP5LQ9HCH0 1330 aa8.36□□□□□ -1.07
RNU2-3P-201ENST00000410144 MYT1Q01538 1121 aa8.36□□□□□ -1.07
RNU2-3P-201ENST00000410144 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
RNU2-3P-201ENST00000410144 HS6ST3Q8IZP7 471 aa8.36□□□□□ -1.07
RNU2-3P-201ENST00000410144 RYDENQ9NUL5 291 aaKnown RBP8.36□□□□□ -1.07
RNU2-3P-201ENST00000410144 POTECB2RU33 542 aa8.35□□□□□ -1.07
RNU2-3P-201ENST00000410144 STK17AQ9UEE5 414 aa8.35□□□□□ -1.07
RNU2-3P-201ENST00000410144 PACS2Q86VP3 889 aa8.34□□□□□ -1.07
RNU2-3P-201ENST00000410144 EPAS1Q99814 870 aa8.34□□□□□ -1.07
RNU2-3P-201ENST00000410144 PKD2Q13563 968 aa8.33□□□□□ -1.08
RNU2-3P-201ENST00000410144 ZNF516Q92618 1163 aa8.33□□□□□ -1.08
RNU2-3P-201ENST00000410144 DDX27Q96GQ7 796 aaKnown RBP8.33□□□□□ -1.08
RNU2-3P-201ENST00000410144 TMUB1Q9BVT8 246 aa8.32□□□□□ -1.08
RNU2-3P-201ENST00000410144 TRIM67Q6ZTA4 783 aa8.31□□□□□ -1.08
RNU2-3P-201ENST00000410144 SAMD7Q7Z3H4 446 aa8.3□□□□□ -1.08
RNU2-3P-201ENST00000410144 LARP6Q9BRS8 491 aaKnown RBP8.3□□□□□ -1.08
RNU2-3P-201ENST00000410144 NKX2-3Q8TAU0 364 aa8.28□□□□□ -1.08
RNU2-3P-201ENST00000410144 EMILIN3Q9NT22 766 aa8.28□□□□□ -1.08
RNU2-3P-201ENST00000410144 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
RNU2-3P-201ENST00000410144 PRR20EP86478 221 aa8.27□□□□□ -1.09
RNU2-3P-201ENST00000410144 PRR20CP86479 221 aa8.27□□□□□ -1.09
RNU2-3P-201ENST00000410144 PRR20DP86480 221 aa8.27□□□□□ -1.09
RNU2-3P-201ENST00000410144 PRR20BP86481 221 aa8.27□□□□□ -1.09
RNU2-3P-201ENST00000410144 PRR20AP86496 221 aa8.27□□□□□ -1.09
RNU2-3P-201ENST00000410144 KRTAP4-6Q9BYQ5 205 aa8.27□□□□□ -1.09
RNU2-3P-201ENST00000410144 SLC19A1P41440 591 aa8.26□□□□□ -1.09
RNU2-3P-201ENST00000410144 RBM33Q96EV2 1170 aaKnown RBP8.26□□□□□ -1.09
RNU2-3P-201ENST00000410144 TSKSQ9UJT2 592 aa8.26□□□□□ -1.09
RNU2-3P-201ENST00000410144 INSM1Q01101 510 aaPredicted RBP8.25□□□□□ -1.09
RNU2-3P-201ENST00000410144 MFSD10Q14728 455 aa8.25□□□□□ -1.09
RNU2-3P-201ENST00000410144 FAM187AA6NFU0 413 aa8.24□□□□□ -1.09
RNU2-3P-201ENST00000410144 WFS1O76024 890 aa8.24□□□□□ -1.09
RNU2-3P-201ENST00000410144 APLP1P51693 650 aa8.23□□□□□ -1.09
RNU2-3P-201ENST00000410144 ZNF598Q86UK7 904 aaKnown RBP8.22□□□□□ -1.09
RNU2-3P-201ENST00000410144 NECTIN2Q92692 538 aa8.22□□□□□ -1.09
RNU2-3P-201ENST00000410144 RNF40O75150 1001 aa8.21□□□□□ -1.1
RNU2-3P-201ENST00000410144 HDGFP51858 240 aaKnown RBP8.21□□□□□ -1.1
RNU2-3P-201ENST00000410144 SPRYD7Q5W111 196 aa8.21□□□□□ -1.1
RNU2-3P-201ENST00000410144 DNAJC5Q9H3Z4 198 aa8.21□□□□□ -1.1
RNU2-3P-201ENST00000410144 SMAPO00193 183 aa8.2□□□□□ -1.1
RNU2-3P-201ENST00000410144 WIPF1O43516 503 aa8.2□□□□□ -1.1
RNU2-3P-201ENST00000410144 CHGAP10645 457 aaKnown RBP8.2□□□□□ -1.1
RNU2-3P-201ENST00000410144 COPS2P61201 443 aa8.19□□□□□ -1.1
RNU2-3P-201ENST00000410144 NKX1-1Q15270 411 aaPredicted RBP8.19□□□□□ -1.1
RNU2-3P-201ENST00000410144 AAASQ9NRG9 546 aa8.19□□□□□ -1.1
RNU2-3P-201ENST00000410144 NBPF26B4DH59 902 aa8.18□□□□□ -1.1
RNU2-3P-201ENST00000410144 ST8SIA5O15466 376 aa8.18□□□□□ -1.1
RNU2-3P-201ENST00000410144 RNF223E7ERA6 249 aa8.17□□□□□ -1.1
RNU2-3P-201ENST00000410144 ZPR1O75312 459 aa8.17□□□□□ -1.1
RNU2-3P-201ENST00000410144 MAP3K7O43318 606 aa8.16□□□□□ -1.1
RNU2-3P-201ENST00000410144 ZNF697Q5TEC3 545 aa8.16□□□□□ -1.1
RNU2-3P-201ENST00000410144 EMID1Q96A84 441 aaPredicted RBP8.16□□□□□ -1.1
RNU2-3P-201ENST00000410144 CDCA7LQ96GN5 454 aa8.16□□□□□ -1.1
RNU2-3P-201ENST00000410144 EN1Q05925 392 aaPredicted RBP8.15□□□□□ -1.1
RNU2-3P-201ENST00000410144 TATDN2Q93075 761 aa8.15□□□□□ -1.1
RNU2-3P-201ENST00000410144 TNFRSF10AO00220 468 aa8.14□□□□□ -1.11
RNU2-3P-201ENST00000410144 GDF9O60383 454 aa8.14□□□□□ -1.11
RNU2-3P-201ENST00000410144 PRSS12P56730 875 aa8.14□□□□□ -1.11
RNU2-3P-201ENST00000410144 TSR1Q2NL82 804 aaKnown RBP8.14□□□□□ -1.11
RNU2-3P-201ENST00000410144 DDX12PQ92771 950 aa8.14□□□□□ -1.11
RNU2-3P-201ENST00000410144 NFX1Q12986 1120 aaKnown RBP8.13□□□□□ -1.11
RNU2-3P-201ENST00000410144 ANKLE1Q8NAG6 615 aa8.13□□□□□ -1.11
RNU2-3P-201ENST00000410144 PNMA3Q9UL41 463 aa8.13□□□□□ -1.11
RNU2-3P-201ENST00000410144 NBR1Q14596 966 aa8.12□□□□□ -1.11
RNU2-3P-201ENST00000410144 CRIPAKQ8N1N5 446 aa8.12□□□□□ -1.11
RNU2-3P-201ENST00000410144 CERKQ8TCT0 537 aa8.12□□□□□ -1.11
RNU2-3P-201ENST00000410144 C11orf95C9JLR9 678 aaPredicted RBP8.11□□□□□ -1.11
RNU2-3P-201ENST00000410144 DPYSL4O14531 572 aa8.11□□□□□ -1.11
RNU2-3P-201ENST00000410144 SLF2Q8IX21 1173 aa8.11□□□□□ -1.11
RNU2-3P-201ENST00000410144 FAM198AQ9UFP1 575 aa8.11□□□□□ -1.11
RNU2-3P-201ENST00000410144 PRR14Q9BWN1 585 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms