RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 CHMP5Q9NZZ3 219 aa16.16■□□□□ 0.18
DYSF-209ENST00000410041 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
DYSF-209ENST00000410041 CCDC144AA2RUR9 1427 aa16.15■□□□□ 0.18
DYSF-209ENST00000410041 ARID3AQ99856 593 aa16.15■□□□□ 0.18
DYSF-209ENST00000410041 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
DYSF-209ENST00000410041 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
DYSF-209ENST00000410041 MSH5O43196 834 aa16.14■□□□□ 0.17
DYSF-209ENST00000410041 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.17
DYSF-209ENST00000410041 HDGFL2Q7Z4V5 671 aaPredicted RBP16.13■□□□□ 0.17
DYSF-209ENST00000410041 ZKSCAN2Q63HK3 967 aa16.13■□□□□ 0.17
DYSF-209ENST00000410041 ZBTB7CA1YPR0 619 aa16.12■□□□□ 0.17
DYSF-209ENST00000410041 APAF1O14727 1248 aa16.12■□□□□ 0.17
DYSF-209ENST00000410041 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
DYSF-209ENST00000410041 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
DYSF-209ENST00000410041 HNRNPMP52272 730 aaKnown RBP eCLIP16.12■□□□□ 0.17
DYSF-209ENST00000410041 ERICH3Q5RHP9 1530 aa16.12■□□□□ 0.17
DYSF-209ENST00000410041 ST18O60284 1047 aa16.11■□□□□ 0.17
DYSF-209ENST00000410041 BACH2Q9BYV9 841 aa16.11■□□□□ 0.17
DYSF-209ENST00000410041 KIAA1211Q6ZU35 1233 aa16.11■□□□□ 0.17
DYSF-209ENST00000410041 BRPF3Q9ULD4 1205 aa16.11■□□□□ 0.17
DYSF-209ENST00000410041 ANO8Q9HCE9 1232 aaPredicted RBP16.1■□□□□ 0.17
DYSF-209ENST00000410041 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
DYSF-209ENST00000410041 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
DYSF-209ENST00000410041 RRP7AQ9Y3A4 280 aaKnown RBP16.1■□□□□ 0.17
DYSF-209ENST00000410041 BCL2L13Q9BXK5 485 aa16.09■□□□□ 0.17
DYSF-209ENST00000410041 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
DYSF-209ENST00000410041 CUX1P39880 1505 aa16.09■□□□□ 0.17
DYSF-209ENST00000410041 AAMPQ13685 434 aa16.09■□□□□ 0.17
DYSF-209ENST00000410041 HMMRO75330 724 aa16.08■□□□□ 0.17
DYSF-209ENST00000410041 AKNAQ7Z591 1439 aa16.08■□□□□ 0.17
DYSF-209ENST00000410041 PHF14O94880 888 aa16.08■□□□□ 0.16
DYSF-209ENST00000410041 MIA2Q96PC5 1412 aa16.07■□□□□ 0.16
DYSF-209ENST00000410041 CASKIN1Q8WXD9 1431 aa16.06■□□□□ 0.16
DYSF-209ENST00000410041 MRE11P49959 708 aa16.06■□□□□ 0.16
DYSF-209ENST00000410041 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
DYSF-209ENST00000410041 RTF1Q92541 710 aaKnown RBP16.05■□□□□ 0.16
DYSF-209ENST00000410041 FAM43AQ8N2R8 423 aa16.04■□□□□ 0.16
DYSF-209ENST00000410041 HTATSF1O43719 755 aaKnown RBP16.04■□□□□ 0.16
DYSF-209ENST00000410041 DDX19BQ9UMR2 479 aa16.04■□□□□ 0.16
DYSF-209ENST00000410041 TERF2IPQ9NYB0 399 aa16.04■□□□□ 0.16
DYSF-209ENST00000410041 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
DYSF-209ENST00000410041 PNISRQ8TF01 805 aaKnown RBP16.04■□□□□ 0.16
DYSF-209ENST00000410041 CDCA7LQ96GN5 454 aa16.03■□□□□ 0.16
DYSF-209ENST00000410041 NAP1L2Q9ULW6 460 aaPredicted RBP16.03■□□□□ 0.16
DYSF-209ENST00000410041 STK26Q9P289 416 aa16.03■□□□□ 0.16
DYSF-209ENST00000410041 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
DYSF-209ENST00000410041 CCDC184Q52MB2 194 aa16.02■□□□□ 0.16
DYSF-209ENST00000410041 PRXQ9BXM0 1461 aa16.02■□□□□ 0.16
DYSF-209ENST00000410041 NCOA2Q15596 1464 aa16.02■□□□□ 0.16
DYSF-209ENST00000410041 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
DYSF-209ENST00000410041 DZIP1LQ8IYY4 767 aaKnown RBP16.02■□□□□ 0.15
DYSF-209ENST00000410041 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.02■□□□□ 0.15
DYSF-209ENST00000410041 C22orf23Q9BZE7 217 aa16.01■□□□□ 0.15
DYSF-209ENST00000410041 LMOD3Q0VAK6 560 aa16.01■□□□□ 0.15
DYSF-209ENST00000410041 HFM1A2PYH4 1435 aa16.01■□□□□ 0.15
DYSF-209ENST00000410041 FYCO1Q9BQS8 1478 aa16.01■□□□□ 0.15
DYSF-209ENST00000410041 GGT6Q6P531 493 aa16■□□□□ 0.15
DYSF-209ENST00000410041 WASHC2CQ9Y4E1 1318 aa16■□□□□ 0.15
DYSF-209ENST00000410041 TRIM6-TRIM34B2RNG4 842 aa15.99■□□□□ 0.15
DYSF-209ENST00000410041 STK31Q9BXU1 1019 aa15.99■□□□□ 0.15
DYSF-209ENST00000410041 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
DYSF-209ENST00000410041 KIF3BO15066 747 aa15.99■□□□□ 0.15
DYSF-209ENST00000410041 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
DYSF-209ENST00000410041 NBPF8Q3BBV2 869 aa15.98■□□□□ 0.15
DYSF-209ENST00000410041 NOL8Q76FK4 1167 aaKnown RBP15.98■□□□□ 0.15
DYSF-209ENST00000410041 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
DYSF-209ENST00000410041 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
DYSF-209ENST00000410041 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
DYSF-209ENST00000410041 FOXD4L5Q5VV16 416 aaPredicted RBP15.96■□□□□ 0.15
DYSF-209ENST00000410041 FOXD4L4Q8WXT5 416 aaPredicted RBP15.96■□□□□ 0.15
DYSF-209ENST00000410041 FAM13BQ9NYF5 915 aa15.96■□□□□ 0.15
DYSF-209ENST00000410041 TRAK2O60296 914 aa15.96■□□□□ 0.15
DYSF-209ENST00000410041 PANK1Q8TE04 598 aa15.96■□□□□ 0.15
DYSF-209ENST00000410041 SPAG9O60271 1321 aaKnown RBP15.96■□□□□ 0.14
DYSF-209ENST00000410041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.95■□□□□ 0.14
DYSF-209ENST00000410041 NUCB2P80303 420 aa15.95■□□□□ 0.14
DYSF-209ENST00000410041 SOX12O15370 315 aa15.95■□□□□ 0.14
DYSF-209ENST00000410041 RUNDC1Q96C34 613 aa15.95■□□□□ 0.14
DYSF-209ENST00000410041 ZNF644Q9H582 1327 aaPredicted RBP15.95■□□□□ 0.14
DYSF-209ENST00000410041 A0A0G2JS52 829 aa15.95■□□□□ 0.14
DYSF-209ENST00000410041 TRAK1Q9UPV9 953 aa15.95■□□□□ 0.14
DYSF-209ENST00000410041 ATP6V1DQ9Y5K8 247 aa15.94■□□□□ 0.14
DYSF-209ENST00000410041 REC8O95072 547 aa15.94■□□□□ 0.14
DYSF-209ENST00000410041 CHMP4AQ9BY43 222 aa15.94■□□□□ 0.14
DYSF-209ENST00000410041 TAOK2Q9UL54 1235 aa15.94■□□□□ 0.14
DYSF-209ENST00000410041 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
DYSF-209ENST00000410041 PDE3AQ14432 1141 aa15.93■□□□□ 0.14
DYSF-209ENST00000410041 KIF16BQ96L93 1317 aa15.93■□□□□ 0.14
DYSF-209ENST00000410041 HDGFP51858 240 aaKnown RBP15.93■□□□□ 0.14
DYSF-209ENST00000410041 ANKRD50Q9ULJ7 1429 aa15.93■□□□□ 0.14
DYSF-209ENST00000410041 AMER1Q5JTC6 1135 aaPredicted RBP15.92■□□□□ 0.14
DYSF-209ENST00000410041 STAC3Q96MF2 364 aa15.92■□□□□ 0.14
DYSF-209ENST00000410041 ISY1Q9ULR0 285 aaKnown RBP15.92■□□□□ 0.14
DYSF-209ENST00000410041 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
DYSF-209ENST00000410041 JPH4Q96JJ6 628 aa15.91■□□□□ 0.14
DYSF-209ENST00000410041 MAP7D2Q96T17 732 aa15.91■□□□□ 0.14
DYSF-209ENST00000410041 TIAM1Q13009 1591 aa15.91■□□□□ 0.14
DYSF-209ENST00000410041 TPM4P67936 248 aa15.91■□□□□ 0.14
DYSF-209ENST00000410041 TPM2P07951 284 aa15.9■□□□□ 0.14
DYSF-209ENST00000410041 PRKCSHP14314 528 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms