RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 UHRF1BP1Q6BDS2 1440 aa15.11■□□□□ 0.01
ITGA6-203ENST00000409532 MYBBP1AQ9BQG0 1328 aaKnown RBP15.11■□□□□ 0.01
ITGA6-203ENST00000409532 CCDC144AA2RUR9 1427 aa15.1■□□□□ 0.01
ITGA6-203ENST00000409532 RALBP1Q15311 655 aa15.08■□□□□ 0.01
ITGA6-203ENST00000409532 SHANK2Q9UPX8 1470 aa15.08■□□□□ 0
ITGA6-203ENST00000409532 CDCA7LQ96GN5 454 aa15.07■□□□□ 0
ITGA6-203ENST00000409532 FAM135AQ9P2D6 1515 aa15.07■□□□□ 0
ITGA6-203ENST00000409532 CCDC141Q6ZP82 1450 aa15.06■□□□□ 0
ITGA6-203ENST00000409532 EXOC6Q8TAG9 804 aa15.06■□□□□ 0
ITGA6-203ENST00000409532 NBR1Q14596 966 aa15.05■□□□□ -0
ITGA6-203ENST00000409532 PANK3Q9H999 370 aa15.05■□□□□ -0
ITGA6-203ENST00000409532 KTN1Q86UP2 1357 aaKnown RBP15.05■□□□□ -0
ITGA6-203ENST00000409532 ARHGEF12Q9NZN5 1544 aa15.05■□□□□ -0
ITGA6-203ENST00000409532 SAMD9LQ8IVG5 1584 aa15.05■□□□□ -0
ITGA6-203ENST00000409532 NLRP13Q86W25 1043 aa15.05■□□□□ -0
ITGA6-203ENST00000409532 BRD4O60885 1362 aaPredicted RBP15.05■□□□□ -0
ITGA6-203ENST00000409532 ARHGAP5Q13017 1502 aa15.04■□□□□ -0
ITGA6-203ENST00000409532 SYCP2Q9BX26 1530 aa15.04■□□□□ -0
ITGA6-203ENST00000409532 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
ITGA6-203ENST00000409532 RCAN3Q9UKA8 241 aa15.04■□□□□ -0
ITGA6-203ENST00000409532 RNF123Q5XPI4 1314 aa15.04■□□□□ -0
ITGA6-203ENST00000409532 PLIN1O60240 522 aa15.03■□□□□ -0
ITGA6-203ENST00000409532 PLEKHH2Q8IVE3 1493 aa15.03■□□□□ -0
ITGA6-203ENST00000409532 PRAG1Q86YV5 1406 aa15.03■□□□□ -0
ITGA6-203ENST00000409532 DISP3Q9P2K9 1392 aa15.03■□□□□ -0
ITGA6-203ENST00000409532 CDC42BPBQ9Y5S2 1711 aa15.02■□□□□ -0
ITGA6-203ENST00000409532 NPM2Q86SE8 214 aaKnown RBP15.02■□□□□ -0
ITGA6-203ENST00000409532 LRPPRCP42704 1394 aaKnown RBP15.02□□□□□ -0.01
ITGA6-203ENST00000409532 RRP1P56182 461 aaKnown RBP15.02□□□□□ -0.01
ITGA6-203ENST00000409532 BCL11AQ9H165 835 aa15.02□□□□□ -0.01
ITGA6-203ENST00000409532 PER1O15534 1290 aaPredicted RBP15.01□□□□□ -0.01
ITGA6-203ENST00000409532 RSPH4AQ5TD94 716 aa15.01□□□□□ -0.01
ITGA6-203ENST00000409532 PLA2R1Q13018 1463 aa15□□□□□ -0.01
ITGA6-203ENST00000409532 KDM5DQ9BY66 1539 aa15□□□□□ -0.01
ITGA6-203ENST00000409532 NOP58Q9Y2X3 529 aaKnown RBP15□□□□□ -0.01
ITGA6-203ENST00000409532 TESK2Q96S53 571 aa14.99□□□□□ -0.01
ITGA6-203ENST00000409532 MYT1LQ9UL68 1186 aa14.99□□□□□ -0.01
ITGA6-203ENST00000409532 ARHGEF5Q12774 1597 aa14.99□□□□□ -0.01
ITGA6-203ENST00000409532 A2MP01023 1474 aa14.99□□□□□ -0.01
ITGA6-203ENST00000409532 SKAP1Q86WV1 359 aa14.98□□□□□ -0.01
ITGA6-203ENST00000409532 ANP32AP39687 249 aaKnown RBP14.97□□□□□ -0.01
ITGA6-203ENST00000409532 TMF1P82094 1093 aa14.97□□□□□ -0.01
ITGA6-203ENST00000409532 TTC37Q6PGP7 1564 aa14.97□□□□□ -0.01
ITGA6-203ENST00000409532 PARD3Q8TEW0 1356 aa14.97□□□□□ -0.01
ITGA6-203ENST00000409532 PREX2Q70Z35 1606 aa14.96□□□□□ -0.02
ITGA6-203ENST00000409532 AFAP1Q8N556 730 aa14.95□□□□□ -0.02
ITGA6-203ENST00000409532 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
ITGA6-203ENST00000409532 TRPM1Q7Z4N2 1603 aa14.94□□□□□ -0.02
ITGA6-203ENST00000409532 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.94□□□□□ -0.02
ITGA6-203ENST00000409532 ERBINQ96RT1 1412 aa14.94□□□□□ -0.02
ITGA6-203ENST00000409532 ADAMTS8Q9UP79 889 aa14.93□□□□□ -0.02
ITGA6-203ENST00000409532 EFCAB2Q5VUJ9 269 aa14.92□□□□□ -0.02
ITGA6-203ENST00000409532 ZBTB47Q9UFB7 747 aaPredicted RBP14.91□□□□□ -0.02
ITGA6-203ENST00000409532 KNSTRNQ9Y448 316 aa14.91□□□□□ -0.02
ITGA6-203ENST00000409532 E9PCH4 1651 aa14.91□□□□□ -0.02
ITGA6-203ENST00000409532 IPO9Q96P70 1041 aaKnown RBP14.91□□□□□ -0.02
ITGA6-203ENST00000409532 COL17A1Q9UMD9 1497 aaPredicted RBP14.9□□□□□ -0.02
ITGA6-203ENST00000409532 CRBNQ96SW2 442 aa14.9□□□□□ -0.02
ITGA6-203ENST00000409532 CHD1O14646 1710 aa14.9□□□□□ -0.02
ITGA6-203ENST00000409532 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
ITGA6-203ENST00000409532 GPRASP1Q5JY77 1395 aa14.89□□□□□ -0.03
ITGA6-203ENST00000409532 C20orf194Q5TEA3 1177 aa14.88□□□□□ -0.03
ITGA6-203ENST00000409532 TRAPPC8Q9Y2L5 1435 aa14.88□□□□□ -0.03
ITGA6-203ENST00000409532 WDR43Q15061 677 aaKnown RBP eCLIP14.88□□□□□ -0.03
ITGA6-203ENST00000409532 DEKP35659 375 aaKnown RBP14.88□□□□□ -0.03
ITGA6-203ENST00000409532 SPAG9O60271 1321 aaKnown RBP14.88□□□□□ -0.03
ITGA6-203ENST00000409532 CCDC146Q8IYE0 955 aa14.87□□□□□ -0.03
ITGA6-203ENST00000409532 PDE4AP27815 886 aa14.86□□□□□ -0.03
ITGA6-203ENST00000409532 MYO5CQ9NQX4 1742 aa14.86□□□□□ -0.03
ITGA6-203ENST00000409532 PPP2R1AP30153 589 aa14.86□□□□□ -0.03
ITGA6-203ENST00000409532 UNC13BO14795 1591 aa14.85□□□□□ -0.03
ITGA6-203ENST00000409532 PRDM15P57071 1507 aaPredicted RBP14.85□□□□□ -0.03
ITGA6-203ENST00000409532 KIF3BO15066 747 aa14.84□□□□□ -0.03
ITGA6-203ENST00000409532 DUOX2Q9NRD8 1548 aa14.84□□□□□ -0.03
ITGA6-203ENST00000409532 WASHC2CQ9Y4E1 1318 aa14.83□□□□□ -0.03
ITGA6-203ENST00000409532 MAGI2Q86UL8 1455 aa14.83□□□□□ -0.04
ITGA6-203ENST00000409532 TCERG1O14776 1098 aaKnown RBP14.83□□□□□ -0.04
ITGA6-203ENST00000409532 LAS1LQ9Y4W2 734 aaKnown RBP14.83□□□□□ -0.04
ITGA6-203ENST00000409532 IQGAP3Q86VI3 1631 aa14.83□□□□□ -0.04
ITGA6-203ENST00000409532 ABCC2Q92887 1545 aa14.82□□□□□ -0.04
ITGA6-203ENST00000409532 PLCH2O75038 1416 aa14.82□□□□□ -0.04
ITGA6-203ENST00000409532 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
ITGA6-203ENST00000409532 CFAP70Q5T0N1 1121 aa14.81□□□□□ -0.04
ITGA6-203ENST00000409532 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
ITGA6-203ENST00000409532 MAST1Q9Y2H9 1570 aa14.8□□□□□ -0.04
ITGA6-203ENST00000409532 PLEKHH1Q9ULM0 1364 aa14.8□□□□□ -0.04
ITGA6-203ENST00000409532 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
ITGA6-203ENST00000409532 RTL5Q5HYW3 569 aaPredicted RBP14.79□□□□□ -0.04
ITGA6-203ENST00000409532 BACH2Q9BYV9 841 aa14.79□□□□□ -0.04
ITGA6-203ENST00000409532 BLMP54132 1417 aaPredicted RBP14.79□□□□□ -0.04
ITGA6-203ENST00000409532 PLXNC1O60486 1568 aa14.78□□□□□ -0.04
ITGA6-203ENST00000409532 WDR7Q9Y4E6 1490 aa14.78□□□□□ -0.04
ITGA6-203ENST00000409532 TNNT2P45379 298 aaPredicted RBP14.78□□□□□ -0.04
ITGA6-203ENST00000409532 APAF1O14727 1248 aa14.78□□□□□ -0.04
ITGA6-203ENST00000409532 EIF2AK4Q9P2K8 1649 aaKnown RBP14.77□□□□□ -0.04
ITGA6-203ENST00000409532 GOLGA2Q08379 1002 aa14.77□□□□□ -0.05
ITGA6-203ENST00000409532 DUSP27Q5VZP5 1158 aa14.77□□□□□ -0.05
ITGA6-203ENST00000409532 CDCA8Q53HL2 280 aa14.76□□□□□ -0.05
ITGA6-203ENST00000409532 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
ITGA6-203ENST00000409532 ATP10AO60312 1499 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms