RNA–Protein interactions for RNA: ENST00000409189.7

CCL20-202, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCL20, Length 839 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-202ENST00000409189 ADAM33Q9BZ11 813 aa12.86□□□□□ -0.35
CCL20-202ENST00000409189 ERCC6Q03468 1493 aa12.85□□□□□ -0.35
CCL20-202ENST00000409189 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
CCL20-202ENST00000409189 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
CCL20-202ENST00000409189 PCDHGA10Q9Y5H3 936 aa12.83□□□□□ -0.36
CCL20-202ENST00000409189 IFFO2Q5TF58 517 aa12.82□□□□□ -0.36
CCL20-202ENST00000409189 BHMG1C9JSJ3 638 aaPredicted RBP12.81□□□□□ -0.36
CCL20-202ENST00000409189 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.8□□□□□ -0.36
CCL20-202ENST00000409189 PHF14O94880 888 aa12.79□□□□□ -0.36
CCL20-202ENST00000409189 DPYSL4O14531 572 aa12.77□□□□□ -0.37
CCL20-202ENST00000409189 FBXW7Q969H0 707 aa12.77□□□□□ -0.37
CCL20-202ENST00000409189 TYW1BQ6NUM6 668 aa12.76□□□□□ -0.37
CCL20-202ENST00000409189 PPP1R3GB7ZBB8 358 aa12.75□□□□□ -0.37
CCL20-202ENST00000409189 KCTD12Q96CX2 325 aaKnown RBP12.75□□□□□ -0.37
CCL20-202ENST00000409189 DCAF1Q9Y4B6 1507 aa12.74□□□□□ -0.37
CCL20-202ENST00000409189 ZCCHC6Q5VYS8 1495 aaKnown RBP12.74□□□□□ -0.37
CCL20-202ENST00000409189 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
CCL20-202ENST00000409189 EPAS1Q99814 870 aa12.72□□□□□ -0.37
CCL20-202ENST00000409189 COL9A1P20849 921 aa12.7□□□□□ -0.38
CCL20-202ENST00000409189 PDIA6Q15084 440 aa12.7□□□□□ -0.38
CCL20-202ENST00000409189 PAXIP1Q6ZW49 1069 aaPredicted RBP12.69□□□□□ -0.38
CCL20-202ENST00000409189 ARIH1Q9Y4X5 557 aaPredicted RBP12.69□□□□□ -0.38
CCL20-202ENST00000409189 A0A0G2JS52 829 aa12.68□□□□□ -0.38
CCL20-202ENST00000409189 NBPF3Q9H094 633 aa12.67□□□□□ -0.38
CCL20-202ENST00000409189 RABGEF1Q9UJ41 708 aa12.67□□□□□ -0.38
CCL20-202ENST00000409189 NESP48681 1621 aa12.66□□□□□ -0.38
CCL20-202ENST00000409189 THSD4Q6ZMP0 1018 aa12.66□□□□□ -0.38
CCL20-202ENST00000409189 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
CCL20-202ENST00000409189 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
CCL20-202ENST00000409189 PROX2Q3B8N5 592 aa12.65□□□□□ -0.38
CCL20-202ENST00000409189 C6orf132Q5T0Z8 1188 aa12.65□□□□□ -0.38
CCL20-202ENST00000409189 E2F4Q16254 413 aa12.64□□□□□ -0.39
CCL20-202ENST00000409189 Q6ZNB5 142 aa12.64□□□□□ -0.39
CCL20-202ENST00000409189 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
CCL20-202ENST00000409189 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
CCL20-202ENST00000409189 THOC2Q8NI27 1593 aaKnown RBP12.63□□□□□ -0.39
CCL20-202ENST00000409189 DDX12PQ92771 950 aa12.62□□□□□ -0.39
CCL20-202ENST00000409189 WNT2BQ93097 391 aa12.61□□□□□ -0.39
CCL20-202ENST00000409189 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
CCL20-202ENST00000409189 GOLGA8CPA6NN73 597 aa12.58□□□□□ -0.4
CCL20-202ENST00000409189 PTPN5P54829 565 aa12.58□□□□□ -0.4
CCL20-202ENST00000409189 LAPTM4BQ86VI4 370 aa12.58□□□□□ -0.4
CCL20-202ENST00000409189 NBR1Q14596 966 aa12.56□□□□□ -0.4
CCL20-202ENST00000409189 RBM33Q96EV2 1170 aaKnown RBP12.56□□□□□ -0.4
CCL20-202ENST00000409189 NCAPD3P42695 1498 aa12.56□□□□□ -0.4
CCL20-202ENST00000409189 TRIM6-TRIM34B2RNG4 842 aa12.55□□□□□ -0.4
CCL20-202ENST00000409189 WDR70Q9NW82 654 aa12.55□□□□□ -0.4
CCL20-202ENST00000409189 KIAA1468Q9P260 1216 aa12.55□□□□□ -0.4
CCL20-202ENST00000409189 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
CCL20-202ENST00000409189 MAP3K7O43318 606 aa12.51□□□□□ -0.41
CCL20-202ENST00000409189 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
CCL20-202ENST00000409189 ANKK1Q8NFD2 765 aa12.51□□□□□ -0.41
CCL20-202ENST00000409189 SMARCA2P51531 1590 aa12.49□□□□□ -0.41
CCL20-202ENST00000409189 ZFRQ96KR1 1074 aaKnown RBP12.49□□□□□ -0.41
CCL20-202ENST00000409189 SOWAHBA6NEL2 793 aa12.48□□□□□ -0.41
CCL20-202ENST00000409189 LAPTM4AQ15012 233 aa12.48□□□□□ -0.41
CCL20-202ENST00000409189 FAM98CQ17RN3 349 aaKnown RBP12.47□□□□□ -0.41
CCL20-202ENST00000409189 SEPT9Q9UHD8 586 aaPredicted RBP12.47□□□□□ -0.41
CCL20-202ENST00000409189 TSKSQ9UJT2 592 aa12.47□□□□□ -0.41
CCL20-202ENST00000409189 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.42
CCL20-202ENST00000409189 OSBPP22059 807 aa12.45□□□□□ -0.42
CCL20-202ENST00000409189 BCAMP50895 628 aa12.45□□□□□ -0.42
CCL20-202ENST00000409189 CERKQ8TCT0 537 aa12.44□□□□□ -0.42
CCL20-202ENST00000409189 KIF21AQ7Z4S6 1674 aa12.43□□□□□ -0.42
CCL20-202ENST00000409189 GRXCR2A6NFK2 248 aa12.43□□□□□ -0.42
CCL20-202ENST00000409189 TSHZ2Q9NRE2 1034 aa12.43□□□□□ -0.42
CCL20-202ENST00000409189 NYAP1Q6ZVC0 841 aa12.42□□□□□ -0.42
CCL20-202ENST00000409189 PRSS12P56730 875 aa12.41□□□□□ -0.42
CCL20-202ENST00000409189 PACS2Q86VP3 889 aa12.41□□□□□ -0.42
CCL20-202ENST00000409189 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
CCL20-202ENST00000409189 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
CCL20-202ENST00000409189 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
CCL20-202ENST00000409189 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
CCL20-202ENST00000409189 HMGXB3Q12766 1538 aa12.39□□□□□ -0.43
CCL20-202ENST00000409189 RBM27Q9P2N5 1060 aaKnown RBP12.39□□□□□ -0.43
CCL20-202ENST00000409189 CDHR5Q9HBB8 845 aa12.38□□□□□ -0.43
CCL20-202ENST00000409189 WBP1LQ9NX94 342 aa12.38□□□□□ -0.43
CCL20-202ENST00000409189 ARHGEF1Q92888 912 aaKnown RBP12.37□□□□□ -0.43
CCL20-202ENST00000409189 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
CCL20-202ENST00000409189 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.36□□□□□ -0.43
CCL20-202ENST00000409189 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
CCL20-202ENST00000409189 KCNV2Q8TDN2 545 aa12.35□□□□□ -0.43
CCL20-202ENST00000409189 LRCH3Q96II8 777 aa12.35□□□□□ -0.43
CCL20-202ENST00000409189 TTC13Q8NBP0 860 aa12.34□□□□□ -0.43
CCL20-202ENST00000409189 TSR3Q9UJK0 312 aaKnown RBP12.34□□□□□ -0.43
CCL20-202ENST00000409189 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
CCL20-202ENST00000409189 TRAF7Q6Q0C0 670 aa12.32□□□□□ -0.44
CCL20-202ENST00000409189 RIMBP3CA6NJZ7 1639 aa12.32□□□□□ -0.44
CCL20-202ENST00000409189 RIMBP3BA6NNM3 1639 aa12.32□□□□□ -0.44
CCL20-202ENST00000409189 RIMBP3Q9UFD9 1639 aa12.32□□□□□ -0.44
CCL20-202ENST00000409189 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
CCL20-202ENST00000409189 SMAPO00193 183 aa12.31□□□□□ -0.44
CCL20-202ENST00000409189 TATDN2Q93075 761 aa12.31□□□□□ -0.44
CCL20-202ENST00000409189 HPS5Q9UPZ3 1129 aa12.31□□□□□ -0.44
CCL20-202ENST00000409189 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
CCL20-202ENST00000409189 SAMD7Q7Z3H4 446 aa12.28□□□□□ -0.44
CCL20-202ENST00000409189 PNMA3Q9UL41 463 aa12.28□□□□□ -0.44
CCL20-202ENST00000409189 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
CCL20-202ENST00000409189 MLLT3P42568 568 aaPredicted RBP12.27□□□□□ -0.45
CCL20-202ENST00000409189 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms