RNA–Protein interactions for RNA: ENST00000407684.1

GAREM2-202, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

TSL 2 BASIC

Gene GAREM2, Length 5,138 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-202ENST00000407684 ABCC2Q92887 1545 aa22.76■■□□□ 1.23
GAREM2-202ENST00000407684 GLIPR1L2Q4G1C9 344 aa22.76■■□□□ 1.23
GAREM2-202ENST00000407684 ITSN2Q9NZM3 1697 aa22.76■■□□□ 1.23
GAREM2-202ENST00000407684 STK26Q9P289 416 aa22.76■■□□□ 1.23
GAREM2-202ENST00000407684 RAPGEF3O95398 923 aa22.75■■□□□ 1.23
GAREM2-202ENST00000407684 CFAP53Q96M91 514 aa22.75■■□□□ 1.23
GAREM2-202ENST00000407684 NCOA1Q15788 1441 aa22.75■■□□□ 1.23
GAREM2-202ENST00000407684 SENP3-EIF4A1A0A087X0R7 540 aa22.75■■□□□ 1.23
GAREM2-202ENST00000407684 ASXL2Q76L83 1435 aa22.74■■□□□ 1.23
GAREM2-202ENST00000407684 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
GAREM2-202ENST00000407684 PLCH2O75038 1416 aa22.73■■□□□ 1.23
GAREM2-202ENST00000407684 SRPK2P78362 688 aaKnown RBP22.73■■□□□ 1.23
GAREM2-202ENST00000407684 FANCAO15360 1455 aa22.73■■□□□ 1.23
GAREM2-202ENST00000407684 WDR7Q9Y4E6 1490 aa22.72■■□□□ 1.23
GAREM2-202ENST00000407684 CCER2I3L3R5 266 aa22.71■■□□□ 1.23
GAREM2-202ENST00000407684 SAFB2Q14151 953 aaKnown RBP eCLIP22.7■■□□□ 1.22
GAREM2-202ENST00000407684 TCOF1Q13428 1488 aaKnown RBP22.69■■□□□ 1.22
GAREM2-202ENST00000407684 MYH16Q9H6N6 1097 aa22.68■■□□□ 1.22
GAREM2-202ENST00000407684 NUTM2DQ5VT03 806 aaPredicted RBP22.68■■□□□ 1.22
GAREM2-202ENST00000407684 USP47Q96K76 1375 aa22.68■■□□□ 1.22
GAREM2-202ENST00000407684 CC2D1BQ5T0F9 858 aaKnown RBP22.68■■□□□ 1.22
GAREM2-202ENST00000407684 ST20-MTHFSA0A0A6YYL1 179 aa22.67■■□□□ 1.22
GAREM2-202ENST00000407684 PRKCSHP14314 528 aaPredicted RBP22.65■■□□□ 1.22
GAREM2-202ENST00000407684 DEKP35659 375 aaKnown RBP22.64■■□□□ 1.21
GAREM2-202ENST00000407684 KTN1Q86UP2 1357 aaKnown RBP22.63■■□□□ 1.21
GAREM2-202ENST00000407684 DENND4BO75064 1496 aaPredicted RBP22.62■■□□□ 1.21
GAREM2-202ENST00000407684 PTPRKQ15262 1439 aa22.6■■□□□ 1.21
GAREM2-202ENST00000407684 TRAK1Q9UPV9 953 aa22.6■■□□□ 1.21
GAREM2-202ENST00000407684 CHD1O14646 1710 aa22.6■■□□□ 1.21
GAREM2-202ENST00000407684 HDGFL2Q7Z4V5 671 aaPredicted RBP22.59■■□□□ 1.21
GAREM2-202ENST00000407684 RALBP1Q15311 655 aa22.58■■□□□ 1.21
GAREM2-202ENST00000407684 CDK11BP21127 795 aaKnown RBP22.58■■□□□ 1.21
GAREM2-202ENST00000407684 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.57■■□□□ 1.2
GAREM2-202ENST00000407684 PPP4R2Q9NY27 417 aa22.57■■□□□ 1.2
GAREM2-202ENST00000407684 NUDCQ9Y266 331 aa22.57■■□□□ 1.2
GAREM2-202ENST00000407684 DDRGK1Q96HY6 314 aa22.56■■□□□ 1.2
GAREM2-202ENST00000407684 ZBTB7CA1YPR0 619 aa22.55■■□□□ 1.2
GAREM2-202ENST00000407684 MORC1Q86VD1 984 aa22.55■■□□□ 1.2
GAREM2-202ENST00000407684 SYCP2Q9BX26 1530 aa22.54■■□□□ 1.2
GAREM2-202ENST00000407684 ANKRD30BQ9BXX2 1392 aa22.54■■□□□ 1.2
GAREM2-202ENST00000407684 ABCA8O94911 1581 aa22.54■■□□□ 1.2
GAREM2-202ENST00000407684 SLC52A1Q9NWF4 448 aa22.53■■□□□ 1.2
GAREM2-202ENST00000407684 PPM1GO15355 546 aaPredicted RBP22.53■■□□□ 1.2
GAREM2-202ENST00000407684 TNNT2P45379 298 aaPredicted RBP22.52■■□□□ 1.2
GAREM2-202ENST00000407684 DHX29Q7Z478 1369 aaKnown RBP22.52■■□□□ 1.2
GAREM2-202ENST00000407684 SHANK2Q9UPX8 1470 aa22.5■■□□□ 1.19
GAREM2-202ENST00000407684 UHRF1BP1LA0JNW5 1464 aa22.5■■□□□ 1.19
GAREM2-202ENST00000407684 BECN1Q14457 450 aa22.5■■□□□ 1.19
GAREM2-202ENST00000407684 TERF2IPQ9NYB0 399 aa22.5■■□□□ 1.19
GAREM2-202ENST00000407684 MAPK8IP3Q9UPT6 1336 aa22.5■■□□□ 1.19
GAREM2-202ENST00000407684 POGZQ7Z3K3 1410 aa22.5■■□□□ 1.19
GAREM2-202ENST00000407684 TEX14Q8IWB6 1497 aa22.49■■□□□ 1.19
GAREM2-202ENST00000407684 NEUROD2Q15784 382 aa22.48■■□□□ 1.19
GAREM2-202ENST00000407684 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
GAREM2-202ENST00000407684 ZNF518AQ6AHZ1 1483 aa22.47■■□□□ 1.19
GAREM2-202ENST00000407684 MAGI3Q5TCQ9 1506 aa22.47■■□□□ 1.19
GAREM2-202ENST00000407684 EVC2Q86UK5 1308 aa22.46■■□□□ 1.19
GAREM2-202ENST00000407684 PLEKHG5O94827 1062 aa22.46■■□□□ 1.19
GAREM2-202ENST00000407684 ERBINQ96RT1 1412 aa22.45■■□□□ 1.18
GAREM2-202ENST00000407684 A0A0G2JS52 829 aa22.45■■□□□ 1.18
GAREM2-202ENST00000407684 NBPF8Q3BBV2 869 aa22.44■■□□□ 1.18
GAREM2-202ENST00000407684 TRAPPC8Q9Y2L5 1435 aa22.44■■□□□ 1.18
GAREM2-202ENST00000407684 DNMT1P26358 1616 aaKnown RBP22.44■■□□□ 1.18
GAREM2-202ENST00000407684 RPGRIP1LQ68CZ1 1315 aa22.43■■□□□ 1.18
GAREM2-202ENST00000407684 CCDC7Q96M83 1385 aa22.43■■□□□ 1.18
GAREM2-202ENST00000407684 CENPJQ9HC77 1338 aaPredicted RBP22.43■■□□□ 1.18
GAREM2-202ENST00000407684 PNNQ9H307 717 aaKnown RBP22.43■■□□□ 1.18
GAREM2-202ENST00000407684 FTSJ3Q8IY81 847 aaKnown RBP22.42■■□□□ 1.18
GAREM2-202ENST00000407684 B4GALNT3Q6L9W6 998 aa22.41■■□□□ 1.18
GAREM2-202ENST00000407684 PANK3Q9H999 370 aa22.41■■□□□ 1.18
GAREM2-202ENST00000407684 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
GAREM2-202ENST00000407684 LMOD2Q6P5Q4 547 aa22.41■■□□□ 1.18
GAREM2-202ENST00000407684 PPP6R1Q9UPN7 881 aa22.4■■□□□ 1.18
GAREM2-202ENST00000407684 NOP58Q9Y2X3 529 aaKnown RBP22.4■■□□□ 1.18
GAREM2-202ENST00000407684 RTEL1-TNFRSF6BF6WH68 1400 aa22.4■■□□□ 1.18
GAREM2-202ENST00000407684 KIF7Q2M1P5 1343 aa22.39■■□□□ 1.18
GAREM2-202ENST00000407684 CFAP70Q5T0N1 1121 aa22.39■■□□□ 1.18
GAREM2-202ENST00000407684 NLRP13Q86W25 1043 aa22.39■■□□□ 1.17
GAREM2-202ENST00000407684 KDM5BQ9UGL1 1544 aa22.39■■□□□ 1.17
GAREM2-202ENST00000407684 U2SURPO15042 1029 aaKnown RBP22.38■■□□□ 1.17
GAREM2-202ENST00000407684 HAP1P54257 671 aaPredicted RBP22.38■■□□□ 1.17
GAREM2-202ENST00000407684 RPRD2Q5VT52 1461 aaKnown RBP22.38■■□□□ 1.17
GAREM2-202ENST00000407684 A2MP01023 1474 aa22.36■■□□□ 1.17
GAREM2-202ENST00000407684 NBPF1Q3BBV0 1214 aa22.35■■□□□ 1.17
GAREM2-202ENST00000407684 FRAT1Q92837 279 aaPredicted RBP22.35■■□□□ 1.17
GAREM2-202ENST00000407684 TRIM44Q96DX7 344 aaPredicted RBP22.35■■□□□ 1.17
GAREM2-202ENST00000407684 ADGRL2O95490 1459 aa22.35■■□□□ 1.17
GAREM2-202ENST00000407684 MINK1Q8N4C8 1332 aaPredicted RBP22.35■■□□□ 1.17
GAREM2-202ENST00000407684 FANCIQ9NVI1 1328 aa22.34■■□□□ 1.17
GAREM2-202ENST00000407684 RGS3P49796 1198 aa22.34■■□□□ 1.17
GAREM2-202ENST00000407684 PRKRIP1Q9H875 184 aaPredicted RBP22.34■■□□□ 1.17
GAREM2-202ENST00000407684 LAS1LQ9Y4W2 734 aaKnown RBP22.33■■□□□ 1.17
GAREM2-202ENST00000407684 MYBBP1AQ9BQG0 1328 aaKnown RBP22.33■■□□□ 1.16
GAREM2-202ENST00000407684 MS4A1P11836 297 aa22.32■■□□□ 1.16
GAREM2-202ENST00000407684 RTN4Q9NQC3 1192 aaKnown RBP22.32■■□□□ 1.16
GAREM2-202ENST00000407684 TMEM132EQ6IEE7 984 aa22.32■■□□□ 1.16
GAREM2-202ENST00000407684 CHMP4BQ9H444 224 aaKnown RBP22.32■■□□□ 1.16
GAREM2-202ENST00000407684 ERICH6BQ5W0A0 696 aa22.32■■□□□ 1.16
GAREM2-202ENST00000407684 WASHC2AQ641Q2 1341 aa22.31■■□□□ 1.16
GAREM2-202ENST00000407684 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms